Carassius gibelio (silver crucian carp): 128019101
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Entry
128019101 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128019101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128019101
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128019101
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128019101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-rbx1
WWE_5
zf-RING_2
zf-RING_Vps41
zf-ANAPC11
zf-RING_5
OST-HTH
zf_RING_Vps8
PHD_NSD
zf-UDP
Motif
Other DBs
NCBI-GeneID:
128019101
NCBI-ProteinID:
XP_052461064
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All DBs
Position
A8:complement(27419792..27449226)
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AA seq
630 aa
AA seq
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MARPGSGVLVSLGGGYSSQSMARVVVWEWLNEHGRWRPYSAAVCHHIENILKGDARGTVI
LGQVDPQLTPYVIDLQSMHQFRQDTGTMRPVQRNFYDPSSAPGKGIVWEWENDCGSWTLY
DMELCVSIQNAYEKQHPWLDLSSLGFSYLVDFDGMSQTNRQSQRKRRIRRRMDLAYPLIA
GSIPKSQSWPVGTSSGTPCTCQQCLLVNSTRAASNAILALQQRRKLYGTEGGATAAVVRQ
SNTFAGTSLWSPTTTVAKRHHNNISLGGGGGGKLDMNGVKFPCTPAIMTLPSNHALTING
QNNLNRPGMQRITGTASRGSVPPGVPALPVKNLTGSGPVHPALAGMTGILMCAAGFPVCL
TRAPKPILHPPPVSKSDLKPVPGINSIRRKTKKKHLRKGKKPEDVVRRYTEKIKMAPDED
CTICMERLATASGYEGVLSYRGIKPELVGKLGKCGHMYHLLCLVAMYNNGNKDGSLQCPT
CKAIYGEKTGTQPPGKMEYHVIPHSLPGYSDTKTIRIVYDIPSGIQTTEHPNPGKKYSAR
GFPRHCYLPDNEKGRKVLKLLIMAWDRHLIFTIGISSTTGEMDTVVWNEIHHKTEFGSNL
TGHGYPDPNYLDNVVRELAAQGVGEDNLKD
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggctcgacccggatctggggttctggtgtcgctgggaggcggatactcgtctcagagc
atggctagggtggtggtttgggaatggctgaacgaacacggccgctggaggccgtacagc
gccgccgtttgtcatcacatcgaaaacatcctgaagggagacgcacgggggacggtcata
ctggggcaggtggatccgcagctcacgccatacgtcatagacctgcagtccatgcatcag
ttcagacaagacacaggcacaatgcgtcccgtgcagcgcaacttctacgacccgtcctcg
gctcctgggaagggcatcgtgtgggaatgggaaaacgactgcggctcctggacgctgtat
gacatggagctgtgcgtcagcatccagaacgcctacgagaagcagcacccctggctggac
ctgagctcgctgggcttcagctacctggtggatttcgacgggatgtcccaaaccaaccgg
cagagccagaggaagcggcgcatccgacgacgcatggacctggcgtaccctctcatcgcc
ggatccatccccaaatcccagtcctggccggtgggcaccagctcgggcacgccgtgcacc
tgtcagcagtgtctgctggtcaacagcacacgggccgcgtccaacgccatcctggcgctg
cagcagaggaggaagctgtacgggacggagggcggagccaccgcagccgtcgtcaggcag
agcaacaccttcgctggcacctccctctggtcgcccacgacgactgttgccaagagacac
cataacaacatatcgctgggcggcggaggaggcgggaagctggacatgaacggtgtgaaa
ttcccatgcacccctgcgatcatgacgcttccgtccaatcacgcgcttactattaacgga
cagaacaatctgaaccggccgggaatgcagcggatcacggggacggccagccgaggatct
gtccctccgggggttcctgcacttcctgtgaagaatctcactggttcaggaccggtccat
cctgcattagcaggaatgactgggatcctcatgtgtgccgccgggttccccgtgtgtttg
actcgggctcctaaacccatcctccatccaccgccggtcagcaagagcgacctgaaaccc
gtgccaggaatcaacagcatccggcgcaagaccaagaagaagcacctccgcaaaggcaaa
aaaccagaggatgtggttcggcgctacacagagaaaatcaaaatggctccggatgaggac
tgcaccatctgcatggagcgactggccaccgcgtctggatacgagggagtgctgagctac
agaggcatcaagcctgagctggtcggcaaactgggaaagtgtggccacatgtaccatctt
ctgtgtctggtggccatgtacaacaacggcaataaggacggcagtctgcagtgtcccacc
tgtaaggccatctacggggagaaaaccggcacacagcctcctgggaaaatggagtaccat
gtgattcctcattctctacctggatactctgatacaaagactatccgcatcgtctatgac
attccctctgggatacagaccacagagcatcccaatcccgggaaaaagtacagcgcgcgg
ggatttcctcgacactgctacttacctgataatgagaaaggccggaaggtgttgaagttg
ttaatcatggcgtgggatcgtcatttgatcttcaccattgggatttccagcaccacagga
gagatggacacggtcgtgtggaacgagattcaccacaagacagagttcggctccaacctc
acgggccacggttaccctgaccccaactatctggacaacgtggtgagagaactggccgcc
cagggcgtcggagaggacaacctgaaggactga
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