Carassius gibelio (silver crucian carp): 128019135
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Entry
128019135 CDS
T08819
Name
(RefSeq) partner of Y14 and mago B-like isoform X1
KO
K14294
partner of Y14 and mago
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128019135
03015 mRNA surveillance pathway
128019135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128019135
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128019135
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago-bind
ThiI_fer
STX17_N
Motif
Other DBs
NCBI-GeneID:
128019135
NCBI-ProteinID:
XP_052461158
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All DBs
Position
A8:complement(28407024..28408847)
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AA seq
230 aa
AA seq
DB search
MLVMMHGVVCASLKKHSETRTDRDTHGASEPSCFFSFCKYIAATQRPDGTWRKPRRVKDG
YVPQEEVPVYENKYVKFFKSKPELPPGMNPEDAAQTRQQQAVSGAQKQSDAAGLSKTAKR
NMKRKEKRKQHSQTPQEASEDVKGLSKELDAMKVTEEQKRVTAEPEAADPTAAAEKAKKI
KNLRKKLRQVEELQQKVDSGELETPSKEQLDKLGRGQALRDELRLLEGHL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgttagtgatgatgcatggtgtcgtgtgcgcgagcctgaagaaacacagcgagactcga
accgatcgcgacacacatggagcatccgaaccttcttgttttttttccttttgtaaatat
atcgccgccacgcagcgtccggacggcacgtggaggaaaccgcggcgcgtgaaggacgga
tacgtcccgcaggaggaggtcccggtctatgagaacaagtacgtcaagttcttcaagagc
aaacccgagctgccgcccggcatgaaccctgaggacgcggctcagacccgacagcagcag
gctgtgagcggagcccagaaacagagcgacgccgccggactctccaaaaccgccaagcgc
aacatgaagcgcaaagaaaagcgcaaacagcacagccagactccacaggaagcctcggag
gacgtgaagggcctgagtaaggagctggacgcgatgaaagtcacagaggagcagaagaga
gtgacggccgagcctgaagctgcggatccgacggcggccgcagagaaagccaagaagata
aagaacctgcggaagaagctgcgacaggtggaggagctccagcagaaggtggattcggga
gagctggagacccccagcaaggagcagctggacaaactgggacggggccaggccttacgg
gatgagctgaggctgctggaaggacatttgtga
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