Carassius gibelio (silver crucian carp): 128019172
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Entry
128019172 CDS
T08819
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cgib01001
]
128019172
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128019172
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128019172
Protein kinases [BR:
cgib01001
]
Serine/threonine kinases: Other
Other
128019172
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128019172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
ARM_PUB
EIF3I
WD40
ANAPC4_WD40
LisH_PAC1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
128019172
NCBI-ProteinID:
XP_052461200
LinkDB
All DBs
Position
A8:complement(2000827..2025101)
Genome browser
AA seq
1525 aa
AA seq
DB search
MASAGEGGVDSKAELTSLLEQWEREQQGGTNDLLNLLTKISDLVERETEEYHKADPDPFD
DRHPGRADPECMLGHLLKILFKNDDFMNALVNSYVMSSREVSLNTAACRLLLNIMPGLET
AVVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLQR
LRELQDKDAESRKDSKRPSVRLAPLLPLDEEAVDGDFTLTEKQESDAELQPVSAARSVGR
YNTGMKGLMKPAAAVPLELDETDGPVEGLRDWRKKENGGKVKQKLNFSLPEPERSFSELS
NSSWTEMSPWVIGNNYHLYPLTAGIEQRLILQYLTPLGEYQELLAVFMQLGARELLMHYM
DLKQTNDVQLTFEALKYLASLLLHKKFAAEFVAHGGVPKLLEIPRPSMAATGVSLCLYYL
AYNQDAMERVCMLPHSLLAEVVSYTLWLLECSHASGCCHATMFFSICFSFRAVLDLFDKQ
DGLRRLVNLISTLEILNPEDQGALLSDDEIFSSRQTAKHTCMALRRYFEAHLGIKVEQVK
QSLQRTEGGALIHPQPYYKACSYTHEQVVEMVEFLIEFGPARLYWEPAEVFHKLSCVQLL
LQLISIACDWRTYYGRADTVRYALDILSILTVIPKTQLLLSENVAVLDENGSTISTVGMS
IVLVVAEGEVFVSDAEIQKSALQVIINCVCAPDKRVSSIGKFISGTPRRRLPQTHRASES
VLAKMWNVVQSNNGIKVLLSLLTIKMPITDADQIRALACKALVGLARSAAVRQIISKLPL
FSSGQIQQLMKEPVLQDKRSEHVRFCKYAAELIERVSGKPLLIGTDVSLARLQRASVVAQ
SRISFPEKELLLLIRNHLLSKGLTDTATALTKEAELPMGLHALAHASVPPFTPVTVATSP
SPAAGIPRTPRLTNGVTGRLGGHTPHALPHHQPRPSTSQAPPPAPPAVSHHSNGSPLIGR
ILFSRERPSPCAAAGGKKPKVLRQKSDHGAFSQSPAMKKQLDRHLPSPPSLDSIITEYLR
EQHARCKNPVTTCPPFSLFTPHQCPESKQRRQAPTNFTPRHTRRVVYPKYGGVDGGCFDR
HLIFSRFRPISVFREAEEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYSC
HSSAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFLDDHYVEFSKLSQDRVI
GTKEHIAHIYDIQSGQKLLTLNNPDLANNYKRNCATFNPTDDLVLNDGVMWDVRTSQAIH
KFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAML
QADDEDDMMEQQMKSPFGSSFRTFDATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQD
SINMDTVCRLYEVGRQRLAEEEEDEEDQEEDDQDDEDDDDSDDDMDDIDTDPLLAELENE
NNGEEEEDGEQDFSPSDDEEVARLLDEEADDDDDDDDDDDDDDDDDDDDDEDSDDNERDV
ELVLDNTDSSDNSDLEDDIILSLNE
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgccggtgagggtggtgtggactctaaagcggagctgacttctctgctggag
cagtgggagagagaacagcagggaggcactaatgacctgctcaacctactgaccaagatt
tcggatcttgttgagcgggagacggaggagtatcacaaggctgatccggacccgtttgat
gaccgtcatccagggcgggccgacccagagtgcatgctgggacacctgctgaaaatcctg
ttcaagaatgatgatttcatgaatgcgctggtgaactcgtatgtgatgagcagtcgtgag
gtgtctctgaacacggctgcgtgcagactgctgctgaacatcatgcctggtctggagacg
gccgtggtctttcaggagaaggagggcatcgtggagcgcttgtttaaatgggcgcaggag
gccgagcagcccctccgaatctacgccacaggtctgctggccggagccatggagaaccag
gacatcgcagctaactaccgcgaggaaaactctgtcctggttcctctaatgctgcagaga
ctgagggagcttcaggacaaggatgcggagagcaggaaggacagtaagcgtccgagcgtc
cgtctggctcctctgctgccgctggacgaggaggcggtggacggagacttcactctcaca
gagaaacaggagtctgacgctgagctgcagcccgtgtctgctgccaggagcgtggggagg
tataacacgggcatgaaggggctgatgaagcccgccgcagccgtcccgttagagctggac
gagaccgacggtccggtggagggcttgagggactggaggaagaaggagaacggtggtaaa
gtgaagcagaagctgaacttctctctgccggagccggagcgcagcttcagtgagctgtcc
aacagcagctggaccgagatgagcccctgggtgatcggaaacaactaccacctgtacccg
ctcacagctggcatagagcagcgcctcatcctgcagtacctgaccccgctgggagagtac
caggagttgttggctgtcttcatgcagcttggtgctcgtgagctgctgatgcactacatg
gacctgaaacagacgaatgatgttcagctcacgtttgaagccctgaagtatcttgcgtct
ctcctccttcataagaagtttgcggctgagtttgttgctcacggtggagtgccgaagctg
ctggagatcccgcgcccctccatggctgccaccggggtctcgctgtgcctctattatctg
gcctacaaccaggacgccatggagcgggtgtgcatgctgcctcactcgctgctggccgag
gtggtgagctacacgctgtggctcctggagtgctctcacgcctccggctgctgtcacgcc
accatgttcttctccatctgtttctccttcagagccgtgctcgatctcttcgacaagcag
gacggcctgcgccgccttgtcaacctgattagcactctggagatcttgaacccggaggac
cagggggcgctgttgagcgatgatgagatcttctctagcagacagactgccaaacacacc
tgcatggcgctgcgcaggtattttgaggctcacctgggcattaaagtggagcaggtcaaa
caatcactgcagcgcacagagggaggagcgctgattcacccgcagccgtattacaaggct
tgctcctacacccatgagcaggtggtggagatggtggagttcctgattgagtttggacca
gcgcgtctgtactgggagccagccgaggtcttccacaaactgtcctgtgtgcagctgctt
ctgcagctcatttccatcgcctgcgactggagaacatactacggcagggctgacacggtg
aggtacgctttggatatcctgagcattttgacagtcattcctaaaacgcagctgctgttg
tcggagaacgttgctgtgctggatgagaacggctcaaccatctctactgttggtatgagc
atcgtgctggtcgtcgcagagggtgaagtatttgtaagtgatgcagaaatccagaagtcg
gccctgcaggtgatcataaactgcgtctgcgctccagacaaacgcgtctctagcatcggc
aagttcatctcgggcaccccgcgtcgccgtctgccgcagacccaccgcgccagcgagagc
gtcctggccaagatgtggaacgtggttcagtccaacaatggcattaaagtcctgctgtcc
ctgctcaccatcaagatgcccatcaccgatgccgatcagattcgtgctctggcgtgcaaa
gctttagttgggttagcacgtagcgccgcggtacgacagatcatcagcaagcttccgctg
ttcagcagcggacagatccagcagctgatgaaagagcctgtgcttcaggacaaacgcagc
gagcatgtgcgcttctgcaaatatgcagcagaactcatagagcgagtgtctggaaagccc
ttgttgatcggcacagatgtgtccctggcgcggctgcagcgggctagcgttgtggcacag
tcgcgtatttcgtttccagagaaggagcttctgttgctcattcggaatcatcttttatct
aaaggactcacggacacagcgacagcactgacgaaagaagccgagctgcccatggggctg
catgctctggctcacgctagcgtgccaccgttcactcccgttactgtcgcgacatctcct
tctcctgccgctggcatcccacggactccccggctcactaacggagtcacgggtcgtctg
ggaggccacaccccccacgcgcttcctcatcaccagccccgcccctccacctcacaggct
ccgccccctgctcctccggcagtgtctcaccacagtaatggctctccgctcataggacgc
atcttgttctcgcgggagcggccatcaccctgtgcagctgcgggggggaagaagccaaaa
gtactgaggcagaaatcagatcatggtgcgttcagccagagtccggccatgaaaaagcag
ctggacagacacctgccttctccaccttctctagacagtatcataacagagtatttgcgg
gagcagcacgcccgctgtaagaacccggtgacgacctgtcctcccttcagcctcttcaca
ccgcaccagtgcccagagtccaagcagagacgccaggctcccaccaacttcactcctcgc
cacacacgcagggtcgtctaccccaaatacggcggggtcgatggaggctgttttgaccgg
catctcatcttcagcaggttccggccgatctctgtgttcagggaggctgaggaggatgag
agcggcttcatgtgttgtgcgttctcagcgcgagagcgtttcctgatgctgggcacgtgt
accggacagctcaaactctacaatgtgttcagtggacaggaggaagccagctacagctgc
cacagctccgccatcacacacctggagccctccagagacggctccctgttgttgacctcc
gcttcctggagttatcccttatcagcgctgtggggaatgaagtctgtattcatcatgaag
cattcattcctggacgatcattatgtggagttcagcaaactctctcaggacagagtcatc
gggacaaaagaacacatcgcacatatatatgacatccagtctggacagaagctcctgacc
ctcaataaccctgacctagccaacaactacaagcgcaactgtgccacgttcaaccccacg
gatgacctggtcctgaacgacggggtcatgtgggacgtccgcacctctcaggccatccat
aagtttgacaagttcaacatgaacatcagcggtgtcttccatcccaatggtttagaggtc
atcatcaacacagagatctgggatttgaggacgtttcatcttcttcacacagtaccagcg
ctcgatcagtgtaggattgtcttcaacaacaatggaacggtcatttatggagccatgttg
caggctgatgatgaggatgatatgatggagcagcagatgaagagtccattcggctcgtcc
ttcaggaccttcgatgccactgattataaacccatcgccaccatcgatgtgaagaggaac
atttttgacctgtgcacagacactaaagactgctatctggctgtcattgagaatcaggac
tcaataaatatggacactgtgtgccggctgtatgaggtcggtcgccagagactcgcggag
gaggaagaggatgaggaggatcaggaggaggacgatcaggacgatgaagatgacgatgac
tctgatgatgacatggatgacatcgatacagacccgctgctggcagagctggagaacgag
aacaacggagaggaagaggaggatggagagcaggacttctctccgtctgatgatgaggag
gtggctcgcctgctggatgaagaggcagatgatgacgatgatgatgatgacgacgatgat
gatgatgacgatgacgatgatgatgatgatgaggattctgatgacaatgagcgagatgtg
gagcttgttctagacaacacagacagctctgataactctgacctggaagatgacatcatc
ctttccctgaacgagtga
DBGET
integrated database retrieval system
