Carassius gibelio (silver crucian carp): 128019184
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Entry
128019184 CDS
T08819
Name
(RefSeq) mRNA-decapping enzyme 1A-like isoform X1
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128019184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128019184
03036 Chromosome and associated proteins [BR:
cgib03036
]
128019184
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128019184
mRNA degradation factors
5'-3' decay
Decapping complex
128019184
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128019184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
128019184
NCBI-ProteinID:
XP_052461236
LinkDB
All DBs
Position
A8:complement(1807969..1814045)
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AA seq
433 aa
AA seq
DB search
MECVNKAGQLMSLAALQQHDPYIVKLLDVAGQVALYTFNSKVNEWEKTEIEGTLFVYARS
ASPHHGFTIMNRLSTENLVEPINKELDLQLQDPFLLYRNNSLGIYSIWFYDQADCQRIAQ
LMLQIVKQEASRASPHTGPSGRTNGCVQSRPTDILELLSKAKDEYQRSVERDVQVSSESA
PSHEKREDFTAAQHEKSGRSVVKQITVEELFGSSLPKEASQSTSSSVGESMCAPVSHSVE
PLLAPRLSTDPGPALVSLFQGGTRDPRPAASDTEETGIGRGSAGPLPPTEGHGMPGFMPG
PLVTPQSFRESACKVSGPFIGKAEFSAQSKEAHAFTQSSTLVKPIPAGPAVQGEESSLLL
SPSVFQHSVINTAEPLKISAPPMPPTADLPSSLYSRSQLKDTLIHLIKNDAHFLSAIHEA
YIQSLSKGLNNVK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgtgaataaagcgggtcagctcatgagtctggcggctctacagcagcatgac
ccctacatagtgaagctgctggacgtcgccggacaggtcgcgctctacaccttcaactcc
aaagtgaacgaatgggagaagactgagattgagggcacattatttgtttatgccaggtca
gcatctcctcatcacggcttcacaatcatgaaccgtctcagtacagagaacctagtggag
ccgatcaataaagagctggacctccagctgcaggaccctttcctcctctacaggaataac
agcttgggcatctacagtatctggttctacgaccaggccgactgccagaggatcgcacag
ctcatgctgcagatagtcaagcaggaggcgtcgcgagcgtctccccacacaggtccgagc
ggcaggaccaatggctgtgttcagagcagacccacagatatcctggagctgctcagcaag
gctaaagacgagtatcaaagatcggttgagagagatgttcaggtgagctctgaatctgcg
ccgtcacacgagaagagagaggacttcacagcagctcaacacgagaagtcaggtcgctca
gtagtgaagcagatcacagtggaagagctgtttggcagctctttacccaaagaagcgtcc
cagtccacaagctcctctgtgggagagagcatgtgtgcacctgtgtctcactcggtggag
cctctcctcgcccctcggctgtccactgacccaggcccggcgctggtctctctgtttcag
ggtggcacccgagacccaagaccagctgcttcagatacggaggagactgggatcggtcgt
ggttcggctggtcctcttcctcccacagagggtcatgggatgcctgggttcatgcccggc
ccgctggtcaccccacagagcttcagagaatctgcctgtaaagtttcagggccttttata
ggaaaagctgaattttcggcacagagtaaagaggcgcatgcgtttacacagtcctcgact
ctggtcaaacccattccagcggggccagctgttcagggggaggagtcttcactgttactg
tctcctagtgtgttccagcattcagtgatcaacacagccgagccactgaagatctcggcc
cccccgatgcctcccacagcagacctgccctcttctctgtacagtcgcagccagcttaaa
gatacactcatacatctcataaagaatgacgcccatttcctcagtgcaatccatgaggct
tacatacagagcctctctaaaggcctcaacaatgtcaagtaa
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