Carassius gibelio (silver crucian carp): 128019444
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Entry
128019444 CDS
T08819
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like isoform X1
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04060
Cytokine-cytokine receptor interaction
cgib04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128019444
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
128019444
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgib04052
]
128019444
04090 CD molecules [BR:
cgib04090
]
128019444
Cytokines and neuropeptides [BR:
cgib04052
]
Cytokines
Tumor necrosis fators
128019444
CD molecules [BR:
cgib04090
]
Proteins
128019444
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
DUF8138
PFF1_TM
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
128019444
NCBI-ProteinID:
XP_052461393
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All DBs
Position
A9:3455948..3459713
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AA seq
272 aa
AA seq
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MPAEDVGPGRGERRRLPWLFLVLVIAAVTSSSLSVISLYHVLALQAEVEGLRAEVVRKRE
EQSGTLDEHMQGAEKQTHQQEEEEHKERIEYLQQTETDDTITDHNVLSKRSVGHTSNKAE
PQPCLQMMADNKKTTFQKEFALDLCTAIPWQVGLKRGSALEEDQGTILVKKEGFFFIYSQ
LSFSQVYYTDSTFAMGHIVIRIKKNVVGDESQHVVLFRCIQSMNRVNHFNTCYTGGVVKL
DSGDRLELLIPRTHANISLEGDSTFLGAIKLA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaagatgttggtccaggtcggggtgaaaggagaaggttgccatggctgttt
ctggtgctggtcatcgctgcggtcacctcctcttccctgtctgtgatctccttgtaccat
gtacttgccctgcaagccgaagtggagggtttgagagccgaggtggtccgcaagagagag
gagcaaagcgggacactggatgaacacatgcagggggcagaaaaacaaacccatcagcag
gaagaagaagagcacaaagagagaattgagtatctgcagcagacggagacggatgatacc
ataacggaccataatgtcctgtcaaaaaggagcgtgggtcatacttcaaacaaagcagaa
ccccagccctgcttacagatgatggcagacaacaagaaaactactttccagaaagagttt
gctttggatttatgcacagctatcccatggcaagtcggactgaagcgtggctcggctctg
gaggaagaccagggcaccattttagtcaaaaaggagggattcttctttatctatagtcag
ctctccttttcccaggtttactacacagactctacgttcgctatgggccacatcgtgatt
cgtataaagaagaacgtggtaggagacgagagtcagcacgtcgttctgttccgctgtatt
cagagcatgaatcgagtcaatcacttcaacacgtgctacactggaggtgtagtgaagttg
gattctggggacagactggagctcctgatacctcgtactcatgcaaatatctctctggaa
ggggactccaccttcttaggagcaataaaactggcctga
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