Carassius gibelio (silver crucian carp): 128019650
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Entry
128019650 CDS
T08819
Name
(RefSeq) vacuolar protein sorting-associated protein 54-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
128019650
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128019650
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128019650
Membrane trafficking [BR:
cgib04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
128019650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
128019650
NCBI-ProteinID:
XP_052461711
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All DBs
Position
A1:36628825..36640750
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AA seq
1013 aa
AA seq
DB search
MISRSCFISYNRYLRVMSSNQGSPPIPQSSDGLFRKPRDPSVAPRHYRRVRSLPDVCPKE
PPGEAGALCDGPSVVADQHRWTVYNSKVNLPAALNDPRLAKRESDFFTKTWGLDFTETEV
MPSFYLPNISREHFSSYLQETAQREKIHERCKNICLNKDDLAVPTITNNHDKARAELEQV
PKIFMKPEFVLNDPATFNAVLPWSHFSVAGGKNSRDVASSRLLQEKLSHYLDVVEVSIAR
QISLRSEAFFHAMSSQHELQDRLRETSDAVAKLRARTAAIDRVMCRGPLQALRDTLTRNN
CIKLHNKLKLMAAVHQTQPTVQLLLSTSEFVGALELIATTKEVLQQELQGIHSFRHLGSQ
LCEMERLIDKMMVADFSTYTQSDLSRAFEEDAQVLEKVPQQPAASGKDRLQSLVFGLLRQ
RKLDFLDIYSEEMIRAAKNIVRQCVMKSVSQISEIDADTVKFHEQMRLMTFHQWFDLLLD
IFEHFILFLKRIKATLSVIRNVVLEVLDSSQRSRLADANHSDGRTNEEEEEAESGGPALH
SGEAELAYLTHEGLFISDALNEAEQRSNAAAHAQLRAQTHTETCGSDSASVTTESSSSRE
HNSNTTSSLPIGGAAAISEDVMPSDLELSRVASNVQELLYTASDVSHDRCVKVLMTRAKD
GSLERLSASEFVCLSQAVESFVRDTEELCGRRSMSLRGALQSQANRFVQRFHEERKTKLS
LLLDNERWKQAEVPAEFQDLVDSIADGRIMLPERRHTGSEDRKPGEFLCVDAQKYAVVGT
VLLLIRMFLEYCQCVNDIPSITTDILTRLADLLKHFNSRSCQLVLGAGALQVVGLKTITT
RNLALASRCLQLVVHYIPVIRAHFETRLQPRQYSILRHLDHITKDYNDHIAEISAKLVAI
MDSMFEKALSKYEVKAPMPSACLRNVCKQMAKMHEAINELLPEEQTQMLFLRINASFKLH
LKRQLARLGVGNDGGPQYGLVMVDVAFYSENVQALRSLEHLDLNMPEIWEQKR
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgatctccaggagctgctttatttcatataacaggtatctcagagtgatgtcctcaaat
cagggctcgcctccgatccctcaatccagcgatggactcttccggaagcccagggaccct
tcagtggcccccagacactatcgaagggtgcgctccttaccggacgtgtgccctaaagag
ccccccggtgaggctggagctctctgtgatgggccgtctgttgtggctgaccagcaccgc
tggactgtgtataactctaaagtgaacctccccgcggccctcaatgaccccaggctggcc
aagagagagtcagacttcttcactaagacctggggcctggacttcaccgagaccgaggtc
atgccttccttctacctgcccaacatcagccgagaacacttcagctcgtacctgcaggag
acggctcagagggagaagattcacgagcgctgtaagaacatctgcttgaacaaagacgat
ctggcagtgcccaccatcaccaataatcacgataaagccagagctgaactggagcaggtg
cccaagatcttcatgaagcctgagtttgtgctgaatgatccagccacgtttaacgcagtg
ttgccgtggtctcacttcagcgtcgccgggggcaaaaacagccgagatgttgcgtcgtca
cggttactgcaggaaaagttgagtcactatctggacgtggtggaggtgagcatcgctcgg
cagatctctctccgctctgaggctttttttcacgccatgtcgtcgcagcacgagctccag
gatcgtctgcgagagacgtccgatgctgtggccaagctccgcgcacgcaccgccgccatc
gaccgcgtgatgtgccgtgggccgctacaagcactgcgggacactctgacccgcaacaac
tgcatcaagctacacaacaagctgaagctgatggcggccgtgcaccagacgcagcccacc
gtgcagctgctgctctccacctcagagttcgtcggggcgctggagctcatcgccaccacc
aaagaagtgctgcagcaggaactgcaggggattcacagcttcaggcacctgggttctcag
ctctgtgagatggagaggttgatcgataagatgatggtggccgatttctccacgtacact
cagagcgatctcagtcgagcctttgaggaggacgctcaggtcctggagaaggtcccacag
cagcctgcagcgtcaggaaaggatcgcttgcagtctctggtcttcggcctgttgagacag
aggaagctggatttcctggacatctacagcgaggagatgatccgagcagctaaaaacatc
gttcgacagtgtgttatgaagtctgtgtcgcagatcagtgagatcgatgcagacactgtc
aaatttcacgagcagatgcgcttgatgacgtttcatcagtggtttgatctgctgctggat
atttttgagcacttcatcctgttcctcaagaggatcaaggctacgctcagcgtcatccgc
aacgtggtgctggaggtgctggacagcagccagaggagtcggctagcagacgccaatcat
tctgacggcaggaccaatgaggaggaagaggaggcggagtctggaggccccgcccttcat
tcaggagaggcggagcttgcatatctcactcacgaggggctgttcatcagcgatgcgctg
aatgaagcggagcaacgcagtaatgcagcagcacacgcacagctgagagcacagacacac
acagagacctgtgggagcgactcggcctccgtaaccaccgaatcatcctccagcagggaa
cacaactccaacactacctcctccctgcccataggaggcgctgctgccattagtgaggac
gtcatgccgtctgatctggagttgagtcgggtggccagtaacgttcaggagctgctgtac
acggcatcagacgtcagtcacgaccgctgcgtcaaagtgctgatgacccgagccaaggac
ggctctctggagcgcttgagcgcgtcagagtttgtgtgtttgagtcaagcggtggagtcg
ttcgtcagagacactgaagagctgtgtggccggcgcagcatgagcctgaggggggcgctg
cagagtcaggccaaccgcttcgtgcagcgcttccatgaagagcgcaagactaaactcagt
ctgctgctggataacgagcgctggaagcaggccgaggtcccggctgagtttcaggatctg
gtcgactccatcgctgacggacgcatcatgctgcccgagcgcagacacacagggtccgag
gacaggaagcccggtgagtttctgtgcgtcgatgcgcagaagtacgctgtggtggggacg
gtgctgctgctgatccggatgtttctggagtactgccagtgtgtgaacgacatcccctcc
atcaccaccgacattctcacacgcctcgccgacctgctcaagcacttcaattctcgcagc
tgtcagctggtgctgggggcgggagctctgcaggtggtgggcctgaaaaccatcaccacc
agaaacctggctctggcgtctcgctgtcttcagttggtggttcactacatccctgtgatc
cgagcacactttgagaccagactgcagcccagacagtacagcatactgagacacttggac
cacatcaccaaggactacaacgatcacatcgcggagatctctgccaagcttgtggccatc
atggacagtatgtttgagaaggctctgtctaagtacgaggtgaaggcgccgatgccgtct
gcgtgtttgcgtaatgtgtgtaaacagatggctaagatgcacgaggctattaatgagctg
ttaccagaggagcagacgcagatgctgttcctcaggataaacgccagctttaagctgcat
ctgaagagacagttagcgcggctgggagtcggcaatgatggtggacctcagtatgggctg
gtaatggtggatgtggcgttttactcagagaacgtgcaggctctgcgctctctggagcat
ctggacttaaacatgccggagatctgggagcagaaaaggtga
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