KEGG   Carassius gibelio (silver crucian carp): 128019734
Entry
128019734         CDS       T08819                                 
Name
(RefSeq) integrin beta-5-like isoform X1
  KO
K06588  integrin beta 5
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04145  Phagosome
cgib04148  Efferocytosis
cgib04510  Focal adhesion
cgib04512  ECM-receptor interaction
cgib04810  Regulation of actin cytoskeleton
cgib04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128019734
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128019734
   04148 Efferocytosis
    128019734
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128019734
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128019734
   04810 Regulation of actin cytoskeleton
    128019734
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    128019734
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cgib04515]
    128019734
Membrane trafficking [BR:cgib04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    128019734
Cell adhesion molecules [BR:cgib04515]
 Integrins
  Integrin beta subunits
   128019734
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail PSI_integrin EGF_integrin Integrin_b_cyt EGF_2 I-EGF_1 vWA_SIBA-E
Other DBs
NCBI-GeneID: 128019734
NCBI-ProteinID: XP_052461869
LinkDB
Position
A9:15613295..15643327
AA seq 805 aa
MWKTCPFTRRPVLLVYIVLDIFIHSVRGLNVCMSGSATSCEECLLIHPSCAWCAQEDFGQ
VRTLNSRCDFSQNLLKRGCDAPFIENPRSDSSLLQSKPLSSKGSGVTQYDVIQIYPQKIS
LSLRPGDQTSFEVQVRPVQDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMRKLTSNF
RLGFGSFVDKNISPFSYTAPKYQDNPCNGYKLFPNCVPTFGFRHLLSLTDKVDRFNEEVQ
KQMVSRNRDAPEGGFDAILQAAVCKEKIGWRKEAYHLLVFATDDVPHLALDGRLGGLVYP
HDGQCHLNDKNEYSAANKMDYPSLALLGEKLAENNIFLIFAVTKRHYVLYKNLTALIPGT
TVEILDQDSKNIIQLIVNAYNNIRSKVELSVWDHPEDLNLAFTATCQDGQPLTGLRKCAD
LKIGDTVSFNVTVDARGCPPKGTRKSFTIRPVGFKDHLEVSVDYHCDCSCTYFTKANSSR
CNSAGTYSCGMCGCEPGHLGARCECKEGEVDHQYLSACREAEGKQVCSGRGECSCNQCLC
YESEFGKIYGTFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTETTSCV
SDDGKICSRRGSCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLADN
QTCQRMCKDEIITVETLKTDDSNTVQCVYKTENDCVMKFTYSEHANGQSVLTALKEPECA
VAPDAMTVLLAVVGSILLMGIVLLALWKLVITVHDRREFARFQSARSRARYEMASNPVYK
QSIRSHPVETDFHMHSIKSCNGGVH
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgtggaaaacttgcccatttacgcgtcgcccggttcttctagtttacatagtcttggat
atatttattcacagcgtcagaggtctcaatgtttgcatgagcggcagcgccacatcttgt
gaagaatgtctcctcattcacccgagctgcgcctggtgcgcgcaagaggactttggacag
gtcagaactctcaactcacgatgtgattttagccagaacttactgaaaagaggatgcgat
gcaccttttatagaaaatcccaggagtgacagctctctgttgcagagcaaacctctgagc
tccaaaggttctggggtgacccagtatgatgtcatccagatatacccacagaagatctct
ctcagcttaaggcctggtgaccagacctcttttgaggtacaagtgcgtcctgtgcaagac
taccctgttgatttgtactacctgatggacctctcgctttccatgaaggacgatctggac
acaatccgcaacctgggcaccaagctggctgaggaaatgaggaagcttacaagtaacttc
cgccttggctttggctcctttgtggataagaacatctcacccttctcctacacagccccc
aagtaccaagacaacccatgcaatggatacaagttgtttccaaactgtgtccctacgttt
ggtttccgtcatctcttgtctcttacggacaaggttgaccgttttaatgaagaagtgcag
aagcagatggtgtcgcggaacagagacgcaccagagggggggtttgatgccattctgcag
gctgcagtttgcaaggagaagattggctggaggaaagaggcctatcatctcttggtgttt
gccaccgatgacgtccctcacttggctttggatggcaggctcggtggactagtgtatcct
cacgatggacagtgtcacctgaacgacaagaacgagtatagtgctgcaaacaagatggac
tacccttcactcgctctacttggagagaaactggctgaaaacaacattttccttatcttt
gctgtgaccaaaagacactatgttctttacaagaatctcacagcattgatccctgggact
acagtggaaattctggaccaagactccaaaaacattattcagctaattgtgaatgcatac
aataacatcaggtcgaaagttgagctgagcgtgtgggaccatcctgaagatctcaatctg
gccttcaccgccacctgccaagatggccagcccctgaccggtctccgcaagtgtgctgac
ctcaaaattggtgacactgtctccttcaacgtaacggtagatgctcgaggatgtcctccg
aaaggcaccaggaagagtttcaccatcaggcctgttggttttaaagaccatcttgaggtc
tctgtggactaccactgtgattgtagctgcacatatttcaccaaggccaacagcagccgc
tgcaactctgccggcacttacagctgtgggatgtgcggctgtgagcccggacacctggga
gcccgctgcgagtgcaaggagggtgaggtggaccaccagtatctcagtgcctgccgtgag
gctgagggcaagcaggtgtgcagcggccgcggagaatgcagctgtaatcagtgtctatgc
tacgagtccgagttcggcaaaatctatggcaccttctgcgagtgtgacgacttctcctgt
gcccgacacaagggtatactatgctcaggccatggagaatgccactgcggtgagtgtaaa
tgccatgctggttatattggagacaactgtaattgctctacagagacgacttcctgtgtg
tcggatgacggcaagatctgtagcaggcggggcagctgtgtgtgtgggcggtgccagtgc
actgagccaggggcatttggggacacatgcgaaaaatgtcccacctgtccagatgcttgt
ggaacaaagagggaatgcatcgagtgtcgtctctttaactcggggagactggccgataac
cagacctgtcagcgcatgtgcaaggatgagatcatcaccgtggaaacactcaaaacggat
gattccaacactgttcaatgtgtgtataagaccgagaatgactgtgtgatgaagttcacc
tactctgaacatgccaacggccagtcggtgctcaccgcgcttaaagagccagaatgtgct
gtagctccagatgccatgacggtgctcctggcagttgttggcagcatcttgttgatgggc
attgtgctgctagccctctggaaactggtcatcaccgtccacgaccgccgcgagttcgca
cgcttccagagtgcacgttcacgggcgcgatatgagatggcatctaatcctgtttataag
caatccatccgctctcacccagtggagactgatttccacatgcatagtatcaagtcatgc
aacggaggagtccactga

DBGET integrated database retrieval system