Carassius gibelio (silver crucian carp): 128019734
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Entry
128019734 CDS
T08819
Name
(RefSeq) integrin beta-5-like isoform X1
KO
K06588
integrin beta 5
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04145
Phagosome
cgib04148
Efferocytosis
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04810
Regulation of actin cytoskeleton
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128019734
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128019734
04148 Efferocytosis
128019734
09144 Cellular community - eukaryotes
04510 Focal adhesion
128019734
09142 Cell motility
04820 Cytoskeleton in muscle cells
128019734
04810 Regulation of actin cytoskeleton
128019734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128019734
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128019734
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128019734
Cell adhesion molecules [BR:
cgib04515
]
Integrins
Integrin beta subunits
128019734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
EGF_integrin
Integrin_b_cyt
EGF_2
I-EGF_1
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
128019734
NCBI-ProteinID:
XP_052461869
LinkDB
All DBs
Position
A9:15613295..15643327
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AA seq
805 aa
AA seq
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MWKTCPFTRRPVLLVYIVLDIFIHSVRGLNVCMSGSATSCEECLLIHPSCAWCAQEDFGQ
VRTLNSRCDFSQNLLKRGCDAPFIENPRSDSSLLQSKPLSSKGSGVTQYDVIQIYPQKIS
LSLRPGDQTSFEVQVRPVQDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLAEEMRKLTSNF
RLGFGSFVDKNISPFSYTAPKYQDNPCNGYKLFPNCVPTFGFRHLLSLTDKVDRFNEEVQ
KQMVSRNRDAPEGGFDAILQAAVCKEKIGWRKEAYHLLVFATDDVPHLALDGRLGGLVYP
HDGQCHLNDKNEYSAANKMDYPSLALLGEKLAENNIFLIFAVTKRHYVLYKNLTALIPGT
TVEILDQDSKNIIQLIVNAYNNIRSKVELSVWDHPEDLNLAFTATCQDGQPLTGLRKCAD
LKIGDTVSFNVTVDARGCPPKGTRKSFTIRPVGFKDHLEVSVDYHCDCSCTYFTKANSSR
CNSAGTYSCGMCGCEPGHLGARCECKEGEVDHQYLSACREAEGKQVCSGRGECSCNQCLC
YESEFGKIYGTFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTETTSCV
SDDGKICSRRGSCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFNSGRLADN
QTCQRMCKDEIITVETLKTDDSNTVQCVYKTENDCVMKFTYSEHANGQSVLTALKEPECA
VAPDAMTVLLAVVGSILLMGIVLLALWKLVITVHDRREFARFQSARSRARYEMASNPVYK
QSIRSHPVETDFHMHSIKSCNGGVH
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaacttgcccatttacgcgtcgcccggttcttctagtttacatagtcttggat
atatttattcacagcgtcagaggtctcaatgtttgcatgagcggcagcgccacatcttgt
gaagaatgtctcctcattcacccgagctgcgcctggtgcgcgcaagaggactttggacag
gtcagaactctcaactcacgatgtgattttagccagaacttactgaaaagaggatgcgat
gcaccttttatagaaaatcccaggagtgacagctctctgttgcagagcaaacctctgagc
tccaaaggttctggggtgacccagtatgatgtcatccagatatacccacagaagatctct
ctcagcttaaggcctggtgaccagacctcttttgaggtacaagtgcgtcctgtgcaagac
taccctgttgatttgtactacctgatggacctctcgctttccatgaaggacgatctggac
acaatccgcaacctgggcaccaagctggctgaggaaatgaggaagcttacaagtaacttc
cgccttggctttggctcctttgtggataagaacatctcacccttctcctacacagccccc
aagtaccaagacaacccatgcaatggatacaagttgtttccaaactgtgtccctacgttt
ggtttccgtcatctcttgtctcttacggacaaggttgaccgttttaatgaagaagtgcag
aagcagatggtgtcgcggaacagagacgcaccagagggggggtttgatgccattctgcag
gctgcagtttgcaaggagaagattggctggaggaaagaggcctatcatctcttggtgttt
gccaccgatgacgtccctcacttggctttggatggcaggctcggtggactagtgtatcct
cacgatggacagtgtcacctgaacgacaagaacgagtatagtgctgcaaacaagatggac
tacccttcactcgctctacttggagagaaactggctgaaaacaacattttccttatcttt
gctgtgaccaaaagacactatgttctttacaagaatctcacagcattgatccctgggact
acagtggaaattctggaccaagactccaaaaacattattcagctaattgtgaatgcatac
aataacatcaggtcgaaagttgagctgagcgtgtgggaccatcctgaagatctcaatctg
gccttcaccgccacctgccaagatggccagcccctgaccggtctccgcaagtgtgctgac
ctcaaaattggtgacactgtctccttcaacgtaacggtagatgctcgaggatgtcctccg
aaaggcaccaggaagagtttcaccatcaggcctgttggttttaaagaccatcttgaggtc
tctgtggactaccactgtgattgtagctgcacatatttcaccaaggccaacagcagccgc
tgcaactctgccggcacttacagctgtgggatgtgcggctgtgagcccggacacctggga
gcccgctgcgagtgcaaggagggtgaggtggaccaccagtatctcagtgcctgccgtgag
gctgagggcaagcaggtgtgcagcggccgcggagaatgcagctgtaatcagtgtctatgc
tacgagtccgagttcggcaaaatctatggcaccttctgcgagtgtgacgacttctcctgt
gcccgacacaagggtatactatgctcaggccatggagaatgccactgcggtgagtgtaaa
tgccatgctggttatattggagacaactgtaattgctctacagagacgacttcctgtgtg
tcggatgacggcaagatctgtagcaggcggggcagctgtgtgtgtgggcggtgccagtgc
actgagccaggggcatttggggacacatgcgaaaaatgtcccacctgtccagatgcttgt
ggaacaaagagggaatgcatcgagtgtcgtctctttaactcggggagactggccgataac
cagacctgtcagcgcatgtgcaaggatgagatcatcaccgtggaaacactcaaaacggat
gattccaacactgttcaatgtgtgtataagaccgagaatgactgtgtgatgaagttcacc
tactctgaacatgccaacggccagtcggtgctcaccgcgcttaaagagccagaatgtgct
gtagctccagatgccatgacggtgctcctggcagttgttggcagcatcttgttgatgggc
attgtgctgctagccctctggaaactggtcatcaccgtccacgaccgccgcgagttcgca
cgcttccagagtgcacgttcacgggcgcgatatgagatggcatctaatcctgtttataag
caatccatccgctctcacccagtggagactgatttccacatgcatagtatcaagtcatgc
aacggaggagtccactga
DBGET
integrated database retrieval system