Carassius gibelio (silver crucian carp): 128019832
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Entry
128019832 CDS
T08819
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128019832
Membrane trafficking [BR:
cgib04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128019832
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
128019832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Lgl_C
Synaptobrevin
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
128019832
NCBI-ProteinID:
XP_052462059
LinkDB
All DBs
Position
A9:complement(18237858..18373794)
Genome browser
AA seq
1267 aa
AA seq
DB search
MKKFRKVLDGLTTSSPVNPGGSPACGSAAGTPGTAPTPRELEIQETLMSEHFQICKTVRH
GVPYQPTALAFDPVQKILAIGSRSGGVRLLGRPGVDCHCQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFESGTIVMWDLRAKRADFRI
YYDEAIHSASWHHEGRQFMCSHSDGSLSLWNLRNTAKPFQVTFPHGKTQRDGRKESCKPI
LKVEYKTSRNSSEAFVVFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVDFLVLCETP
YLNEVQEPYAVVVLLEKDFVVVDLTQSNFPIFENPYPMDIHESPVTCTAYFADCPPDIIP
VLYSIGAKHKKTGYSHKEWPVSGGTWTVGSQTYPEIIITGHADGSIKFWDATAITLQMLY
KLKTSKVFEKPKGGDVGRNAELAEEDPYAVQMISWCPQSRIFCVVGISAHVILYRFSKHD
ANTTITSLEVRLQCEIEDVISPSDAENTPCFSDPSGHSPQPQPPSPRSNTPDSMRDSIPC
LKVKDRMIRMPPGYQAELVVQLLWIDGEPPQQITSLDLNSAYGLLALGNCNGLAVVDYLQ
KTILLCMSTLELYGSADPFQRLTRSPRKNRQSTSDFCMRGLSNFHSDSKKRIRTSYQSLT
ELSDNQVSLDLERSKSPTSAPYAPSLHNDPRGTGEPVSNLRSCHYSPVFYLLDNVKGPGR
KLSLPTDLKTDLDHVNGHCTSPTSQPCLTGRARVPGGPEGPRLARRGPGRPPFRKAQSAA
CMEVSLPVSSLTEGYPSRRAMLQQLHGVSMYSHDEQHITTYSWSERESRENSFSRSRSSS
VSSIDRETKEAVTTLQFAESYVRKSDTLPTPCLWVGTSLGLVLIIPMSIPTDEQERLEDP
VTVAPTGTVLMLKGSVLRIGFLDCGGVLINSPYEVWRDQHAPDDPDRPRKRKLVNFSPSS
SQEASGDGHLAVVCSERQAKVFFMPSQACLYVHNITESSFVLRADVVSVYNSVCLACFCA
NGHIMTLSLPSLRPLLDVSYLPLTDMRIARTFCFTNGGQALYLCSPTEIQRITYSQEMCD
NLQEMLGELFTPIETPEAQNRGFLKGFFGGNAQTFDREELFGEAAAGKASRSLAQHIPGQ
GGMEGMKAAAGGVVGELARARIALDERGQRLGELEERTALMMTSAETFSKHAHELMLKCK
DKKWYQF
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttccggaaggttttggacgggttgaccacttcttcacctgtcaatccaggt
ggatcacccgcgtgcggcagtgcggctgggacccccggtacggcaccgacaccgcgggag
ctggaaatacaggagacactaatgtctgagcacttccaaatctgcaagacagtgcgtcat
ggagttccctatcagcccacagctctggcatttgacccggtgcagaagatccttgccatt
ggctctcgttccggaggagtacggcttctgggacggccaggagtggactgtcattgccag
catgagagtggggcggcagtcctccaactgcagtttctcatcaatgagggggcgctggtc
acagcttgtgcagatgacacactgcatctctggaacttgcgacagcgacgtccggctatc
ctacactctctcaaattcaacagagagaggatcacattttgtcatcttccgtttcaaagt
aagtggctttacgtggggacagagcgtggaaatacgcacatagtgaacatcgaatccttc
gttttgtctggatatgtcatcatgtggaacaaggccatagaactatcaacaaagacacat
ccaggtcccgttgttcatcttagtgacagtccaaaagatgagggaaagttgctgataggt
tttgagagtggcacaatagtaatgtgggatctgagggccaaaagagctgacttcaggata
tactatgacgaggctatacactcagcaagttggcatcatgagggacggcagttcatgtgc
agtcattctgatggcagtctgagcttgtggaacctgagaaacacagccaaaccttttcaa
gtcaccttccctcatggaaaaactcagagagatggaagaaaagagtcatgtaaacccatt
ctcaaggtcgaatacaagacctccagaaacagtagtgaagcatttgttgtcttctccggg
ggtctttcgtacgataaggcaggacgtagacccacccttaccatcatgcatggcaaagcc
atcacagtgttagagatggactatccaatagtggacttcctagtgctctgtgagacgccc
tatctcaacgaggtccaagagccgtatgcagtggtggttctgctggagaaagattttgtt
gtggtcgatctaacccagagcaattttcctatctttgagaacccctaccccatggacatc
catgagtctccagtcacgtgcacggcttactttgccgactgtcctcctgacatcataccc
gtgctttactccataggagctaaacacaaaaagaccggctacagccacaaggagtggccg
gtcagtggtggcacatggacagtcggttcacagacatatccagagattatcatcacagga
catgcagacggatcaataaagttttgggatgccacagcgatcacactgcagatgttgtat
aagctcaagacgtcaaaggtgtttgagaagcctaagggtggagatgtgggacgcaacgct
gagcttgcggaggaagacccctacgctgttcagatgatcagctggtgcccgcagagccgt
atcttttgtgtagttggcatcagtgcccacgtcatcctgtaccgctttagcaaacatgac
gccaacaccaccatcacgtccctagaggtgcggttgcagtgtgagatagaggatgtcatc
tctccgtcggatgcagagaacactccatgtttttcggaccccagcggtcactcgccccaa
cctcagcctcccagtccccgcagcaatacaccggacagcatgcgggacagcatcccttgc
ctcaaggttaaagatcgtatgatccgaatgcctcctggataccaggcggagctggtggtt
cagttattatggatcgatggagagccaccacaacaaatcaccagcttggatttaaactcc
gcctacggactgttggctctaggtaactgcaatggtttggcagttgtggactacctgcag
aagaccattttgctgtgtatgagcaccttggagctttatggatctgcagaccctttccag
cgattaacacgctctcctcgcaaaaaccggcagtccacatcagacttttgcatgcgcggc
ctgtctaactttcattccgattcaaagaaacggatccgtacttcctaccagagtcttaca
gagctttctgataatcaggtgtctttggacctggagaggagcaagtcacccacctcagca
ccctacgccccttccctccataatgaccctcgaggtacaggggaacctgtgtccaacctt
cggtcctgccactacagtcctgtgttttatctgttggacaatgtcaaaggaccaggcaga
aagttaagtctacccacagatcttaagactgatcttgatcatgtgaatggacattgcact
agccccacctcccagccctgtctgactgggagagccagagtcccagggggccctgaaggg
ccacgcctcgcccgcagggggcccggccgaccgcccttccgcaaggcccagtccgccgca
tgcatggaggtctctttgcctgtgtcctccctcaccgaagggtatccgtcccgacgagcc
atgctgcagcagttacatggagtcagtatgtactcccatgatgagcaacacatcaccacc
tactcctggagcgagagagagagtcgcgaaaattcattcagccgttcccggagttctagc
gtttccagcatagacagggaaactaaagaggccgttaccaccctgcagtttgcagagtca
tacgtgcgtaagtcagacaccctgcctacaccatgcctgtgggtgggcacaagtctgggc
ctggtgctcatcataccaatgtccattcctactgacgagcaggaacgcctagaagaccct
gttactgtggcccccaccggcacagtgttaatgctgaagggctccgttctgcggattggt
ttcctggactgtgggggcgtgcttatcaacagtccctatgaggtgtggcgggaccaacat
gccccagatgacccagatcgaccccggaagcggaaactggtcaacttctcaccctcgtct
tctcaggaggccagtggagatggtcacttagctgtagtgtgttccgagaggcaggccaag
gtcttcttcatgccctcccaggcctgtctatatgtgcataacatcactgagtcgtccttt
gtgctgcgggctgacgtggtgtcggtttataacagtgtttgtctggcctgcttctgcgcc
aatggacacattatgactttgagccttcccagtttacggcctctgctagatgtcagctac
ctgccgctaacagacatgcgcattgctagaacattctgcttcaccaacggagggcaggcg
ctgtatctgtgctcccccacagagatacagagaatcacttacagccaggagatgtgtgac
aacctacaggagatgttaggggagctctttacacccatcgagacccctgaggctcagaac
cgtggctttctcaagggcttttttggcggcaatgcccaaaccttcgaccgagaggagttg
tttggtgaggcagcagcgggtaaggcgtcccgcagcctggcacagcacatcccaggacag
ggcggaatggagggcatgaaggcggcagcaggcggggtggtgggagagctggcccgagct
cgcattgctctggacgagagaggacagaggctgggggagctggaggagaggaccgccctg
atgatgaccagtgccgaaaccttctctaaacacgctcacgagctgatgctgaaatgcaaa
gacaagaagtggtatcagttttag
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