KEGG   Carassius gibelio (silver crucian carp): 128019838
Entry
128019838         CDS       T08819                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04137  Mitophagy - animal
cgib04144  Endocytosis
cgib04145  Phagosome
cgib04148  Efferocytosis
cgib05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128019838
   04145 Phagosome
    128019838
   04137 Mitophagy - animal
    128019838
   04148 Efferocytosis
    128019838
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    128019838
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    128019838
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    128019838
   04031 GTP-binding proteins [BR:cgib04031]
    128019838
Membrane trafficking [BR:cgib04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    128019838
 Endosome - Lysosome transport
    128019838
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128019838
  Exosomal proteins of other body fluids (saliva and urine)
   128019838
  Exosomal proteins of colorectal cancer cells
   128019838
  Exosomal proteins of melanoma cells
   128019838
GTP-binding proteins [BR:cgib04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    128019838
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 Tfb2_C
Other DBs
NCBI-GeneID: 128019838
NCBI-ProteinID: XP_052462075
LinkDB
Position
A9:18443161..18450667
AA seq 214 aa
MSSRGTSRVNGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPDTFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYAEETGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAQSTRSCCGN
NT seq 645 nt   +upstreamnt  +downstreamnt
atgagctctcgcgggaccagcagggtcaatggaagcctaccgcagaccaagatttgccag
ttcaaattggtgctgctgggagacatggccgtaggcaagtccagcctggtgctgcgcttt
gttaagggccagtttgatgagtttcaggagaccaccattggagctgcgttcttggcacag
tctgtttgtctggatgacactacagtgaagtttgagatttgggacacggctggacaagag
cgctaccacagcttggcccctatgtactaccgcggagcccaggcagctattgtagttttt
gacatcaccaagcctgacacattcgagcgagcaaaggcttgggtgaaagagctgcagcgg
caggccagtcccaacattgtcattgctctcgcaggaaacaaggctgacctagcagaaaag
agactcgtggagtatgaggaagcccagacatacgcagaagaaacaggcttgcttttcatg
gaaacatctgccaagactgcaatgaatgtaaacgagttgttcctggccattgcaaaaaag
atgccaaaaacagacacccaaaaccctacgcatgctgctcgacacaggggggtaaacctt
caggacccagatgcacagtccactcgaagctgctgtgggaactaa

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