Carassius gibelio (silver crucian carp): 128019838
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Entry
128019838 CDS
T08819
Name
(RefSeq) ras-related protein Rab-5B-like
KO
K07888
Ras-related protein Rab-5B
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04137
Mitophagy - animal
cgib04144
Endocytosis
cgib04145
Phagosome
cgib04148
Efferocytosis
cgib05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128019838
04145 Phagosome
128019838
04137 Mitophagy - animal
128019838
04148 Efferocytosis
128019838
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128019838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128019838
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
128019838
04031 GTP-binding proteins [BR:
cgib04031
]
128019838
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
128019838
Endosome - Lysosome transport
128019838
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128019838
Exosomal proteins of other body fluids (saliva and urine)
128019838
Exosomal proteins of colorectal cancer cells
128019838
Exosomal proteins of melanoma cells
128019838
GTP-binding proteins [BR:
cgib04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
128019838
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Tfb2_C
Motif
Other DBs
NCBI-GeneID:
128019838
NCBI-ProteinID:
XP_052462075
LinkDB
All DBs
Position
A9:18443161..18450667
Genome browser
AA seq
214 aa
AA seq
DB search
MSSRGTSRVNGSLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPDTFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYAEETGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPDAQSTRSCCGN
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcgcgggaccagcagggtcaatggaagcctaccgcagaccaagatttgccag
ttcaaattggtgctgctgggagacatggccgtaggcaagtccagcctggtgctgcgcttt
gttaagggccagtttgatgagtttcaggagaccaccattggagctgcgttcttggcacag
tctgtttgtctggatgacactacagtgaagtttgagatttgggacacggctggacaagag
cgctaccacagcttggcccctatgtactaccgcggagcccaggcagctattgtagttttt
gacatcaccaagcctgacacattcgagcgagcaaaggcttgggtgaaagagctgcagcgg
caggccagtcccaacattgtcattgctctcgcaggaaacaaggctgacctagcagaaaag
agactcgtggagtatgaggaagcccagacatacgcagaagaaacaggcttgcttttcatg
gaaacatctgccaagactgcaatgaatgtaaacgagttgttcctggccattgcaaaaaag
atgccaaaaacagacacccaaaaccctacgcatgctgctcgacacaggggggtaaacctt
caggacccagatgcacagtccactcgaagctgctgtgggaactaa
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integrated database retrieval system