Carassius gibelio (silver crucian carp): 128019876
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Entry
128019876 CDS
T08819
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
128019876
NCBI-ProteinID:
XP_052462144
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Position
A9:19546923..19557257
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AA seq
711 aa
AA seq
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MAAFLVALVHLILLPSAFGGAYYGHKPHPQQHQPLPQMPHMGMGKDISHMLYPHYRKDLP
MHVNKGKNIKGETIPRGEQAVQGETGPKGPPGPPGPQGHPGPQGIGIKGPPGKPGPPGPP
GFPGVGKPGMTGMPGNPGGIGQPGQQGEKGPRGEEGQPGMTGPPGHPGPPGLPGIGKSGG
QGLPGQPGAKGEPGHKGFPGLPGLPGPKGDRGIGQPGPLGIKGPVGPPGPPGQAGLPGMG
KPGLPGVAGPPGIPGKPGQSGEPGPEGTPGGQGLQGQQGAPGIGIPGEKGLPGLPGAPGH
KGLQGPPGLPGKPGLPGFGKPGYPGPKGDKGMGGLPGAQGPKGDKGYAGQPGMKGPPGQT
GPPGPLGSMGAPGGIGSPGLKGEGGSQGAKGDPGPMGQPGPPGFPGQPGLQGEDGEPGPR
GSQGPIGPKGEGGSRGLPGPPGPSGLPGLKGELGQPGPRGPQGPKGISGIAGPGGPSGPP
GPPGPKGEVGLPGQAGPPGQGITGTPGPIGPAGPHGQNGSPGQPGLQGPPGPPGPPGPPP
SPDLMGVLSEMGPALDGMKTGVYKKGKYAGGGDMMGANGLEMPAFTAKLTTPFPPVGMPI
VLDKLLYNGRQNYNPQTGVFTCDLPGIYYFAYHVHCKGANVWVGLYRNGEPLMYTYDEYK
KGFLDQASGSAVIPLQPGDTVYLQLPSDQAAGFYAGQYVDSSFSGFLLYPM
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttcctagttgctttggtgcatttgattctattgccatcagcttttggaggt
gcatattatggacacaaaccacatcctcaacaacatcaacccttaccacagatgcctcac
atgggaatgggaaaggatatttcacacatgctatatccacactacagaaaagacctacca
atgcacgtaaacaaaggcaaaaatatcaaaggtgagaccattcccagaggtgagcaggct
gttcaaggagagactgggccgaaagggccccctggtccgcctgggccccaaggacatcct
gggcctcaaggtattggtataaaaggccctcctggaaagccaggacctcctggtccccca
ggatttccaggagttggtaagccaggaatgacaggtatgcctgggaatccaggaggtatt
gggcaacctggacagcaaggtgaaaagggacccagaggtgaagagggacaaccaggcatg
actgggccccctggtcatcctggaccccccggtctgccaggaataggaaagtctggtgga
caaggattaccaggacagccaggggctaagggagagccaggacataaaggtttccctggt
ctcccagggttacctgggcctaaaggagacagaggaattggacaaccagggccattaggg
ataaaagggccagttgggccacctggcccaccagggcaggcaggattaccgggaatgggt
aagcctggtcttcctggtgtagcaggtccacctggtattccagggaaacctggacagtct
ggggaaccaggtccagagggtacacctggtggacagggcctacaaggacaacaaggggct
cctggaattggaattccaggagaaaaaggattaccaggactgccaggtgcacctggccac
aaaggattacaagggccaccagggttgcctgggaaacctggattacctggatttggcaaa
cctggataccctggcccaaagggtgacaaaggtatgggagggcttcctggtgctcaagga
ccaaaaggagacaaaggttatgctggtcaaccaggcatgaagggtccccctggtcaaact
ggtcctccaggccctctaggatcaatgggggcaccaggtggaattggttccccaggatta
aaaggagaaggaggttcacaaggtgccaagggagatcccggacctatggggcagccaggt
cctccaggatttcctggccaaccaggcctccaaggtgaagatggagaacctgggccaaga
ggatcacaaggacccataggtcccaaaggagaaggaggaagcagaggtctacctggtccc
ccaggtccatctggcctgcctggtcttaaaggagaacttggtcagcctggccccagagga
ccacagggtcctaaaggtatttcaggaattgcaggaccaggaggaccaagtgggcctcct
ggacctcctgggccaaagggagaagttggtctaccaggtcaagctggtccacctggtcaa
ggcattactggaacccctggtcctattggtccagcaggtccacatggccagaatggatcc
ccaggtcagccaggactccaaggtccaccagggcctcctggacccccaggcccccctcct
tcacctgacctgatgggtgttctttctgagatgggacctgccctggatggtatgaaaact
ggtgtgtacaagaaagggaaatatgcaggtgggggtgacatgatgggtgccaatggtctg
gagatgcctgctttcactgccaagcttaccacaccattccctccagttggcatgccaata
gtgcttgacaaactactgtataatgggcgtcagaattacaaccctcagactggtgtattc
acttgtgacctcccaggcatctactattttgcttatcatgtgcactgcaagggtgccaat
gtatgggttgggctctacaggaatggggagccacttatgtatacatatgatgagtacaag
aagggattcctggatcaagcgtctgggagtgctgtcattccattacaaccaggagacaca
gtttatttacagttaccatctgaccaggcagctggattttatgcaggacagtatgtcgac
tcctccttctctggctttttactgtacccaatgtaa
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