KEGG   Carassius gibelio (silver crucian carp): 128019919
Entry
128019919         CDS       T08819                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128019919
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    128019919
   03036 Chromosome and associated proteins [BR:cgib03036]
    128019919
Spliceosome [BR:cgib03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    128019919
 Complex B
    128019919
 Complex C
   U2 SnRNP specific factors
    128019919
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    128019919
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Adaptin_N UNC45-central DUF2298
Other DBs
NCBI-GeneID: 128019919
NCBI-ProteinID: XP_052462237
LinkDB
Position
A9:complement(20660708..20676715)
AA seq 1311 aa
MAQIAKTHDDIEAQILEIQGMKAALVEGAEQGVGLDSTGYYDQEIYGGSDSRFAGYVTSI
AANEQEDDDDEDSSTSLLGPKKPGYHAPVAILNSIPQSDEQYDPFAEHRPQKISDREDEY
KKRRQKMIISPERHDPFADGGKTPDPKMQVRTYMDVMKEQHLSKEEREIRLQMLEKAKSG
ELKAVNGSAASQAAAAKRKRRWDQTADHTPSNTTPKKVSSWDQADGGSDTPGHTPSNSRW
DETPGRAKGSETPGATPSTRMWEPTPSHTPAGAATPGRDTPGHATPGHGGATSSVRKNRW
DETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWDETPVSQMGSSTPLL
TPGKTPLGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDDELDAMFPEGYK
VLPPPAGYVPIRTPARKLAATPTPIGGMTGFHMQTEDRSMKQVNDQPSGNLPFLKPDDIQ
YFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFN
QILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEG
REIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCK
SKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALA
EAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLIL
IREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQL
VDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLI
DGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAAD
LISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPI
KDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAI
RRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALM
NEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQ
HMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQG
LFHPARKVRDVYWKIYNSIYIGSQDALIAHYPLVYNDEKNSYVRYELEYFL
NT seq 3936 nt   +upstreamnt  +downstreamnt
atggcgcagatcgccaaaacacatgacgacattgaggctcagatcctggaaatccagggg
atgaaagccgccctggtggagggagctgagcagggggtcgggcttgattccactggatat
tatgaccaggagatctacggaggcagtgacagccgctttgctggatatgtgacttcaatt
gctgccaacgagcaggaagatgatgatgatgaagattcatccacaagtctgcttggaccg
aagaaaccaggatatcatgcaccggtggcaatactcaattccattcctcagtcagatgag
cagtatgatccctttgctgaacacagaccacagaagatttcagaccgtgaggacgagtac
aagaaacgcagacaaaagatgatcatctccccagagcggcacgatccatttgctgatggg
ggcaaaacaccggaccccaagatgcaggtcaggacatacatggatgttatgaaggagcaa
catctgtccaaagaagagagagaaatcaggctgcagatgctagagaaagcaaaatctgga
gagctgaaagcagtgaatggctctgctgcatctcaggctgctgcggccaaacgcaaacga
cgctgggaccagacagctgaccacacccccagcaacaccacacccaaaaaagtgtccagt
tgggaccaggcagatggaggttctgatactccaggacacacaccttccaacagtcgctgg
gatgagacacctggccgtgccaaaggtagcgagaccccgggagccactccaagcacccgt
atgtgggagcccacaccaagccacaccccagctggagctgccacaccgggtcgagacacc
cctggacatgctactcccggccatggaggggccacttccagtgtgcgcaagaaccgctgg
gatgagacaccaaagacagagagagagacacctggccatggcagtggctgggccgagact
ccacgtacagatagaggagatgagtcagtgggtgagacgcccaccccaggtgcaagcaaa
aggaagtcaagatgggatgaaacaccagtcagtcagatgggctcttcaactcctctgctc
acccctggaaaaacccctcttggcacacctgctatgaatatggccacacccaccccaggt
cacctgatgagcatgaccccagaacagctgcaggcctggcgttgggaacgagagattgat
gagaggaatcgcccattgactgatgatgaacttgatgccatgtttccagaaggatacaaa
gtactgcctccaccagcaggctatgtgcccattcgcaccccagcccgtaagttagctgca
acccccacgcccatcggaggcatgactggcttccacatgcaaacagaggacagatctatg
aaacaagtcaacgatcagccctctggaaacctgcccttcctcaagccagatgacatccag
tactttgataaacttctggttgaagttgacgagtccaccctcagtccagaagaacagaag
gaacgcaagatcatgaagctgctcctgaagatcaagaatggaacgcctcccatgagaaag
gctgctcttcgtcaaatcactgataaagcccgagagtttggtgcaggacccctttttaac
cagatcctgccattgctgatgtctccaacactggaggaccaggagcgtcatctcttggtc
aaagtcattgatcgtatcctgtacaaacttgatgacttggttcgaccatatgtacacaag
attcttgtggtgattgagcccttgctgattgatgaagattactatgctagagtagagggt
agagagatcatctccaacttggcaaaggctgctggtctggccactatgatctccactatg
aggcctgacattgacaacatggacgagtatgtgagaaacacgaccgctcgtgctttcgcc
gtcgtggcgtctgctctgggcattccatctctcctgcctttcctcaaggctgtttgcaag
agcaagaaatcctggcaggctcgtcacacgggtatcaagatcgtacagcagatcgctatt
ctcatgggctgtgctatcctgccccatctccgcagcttggtggagattatagagcatggt
ctcgtggatgagcagcagaaagtgcgaaccatcagcgctctggctatcgctgccctggct
gaagctgctacaccatacggtattgagtcttttgattctgtgctgaaacctctttggaaa
ggtatcaggcaacacagaggcaagggtcttgctgcctttttgaaagccattggatatttg
attcctcttatggatgctgaatatgccaactattacaccagagaagtgatgcttatcctc
attcgagagttccagtctcccgacgaggagatgaagaagattgtcctcaaggtggtgaag
cagtgctgtggcacagatggtgtggaagcgaattacattaaaacagagattttgcccccc
ttctttaaacatttctggcagcaccgaatggcattggataggcgcaactacagacagtta
gtggacactacagtggagctggctaataaggtgggggcagctgagattatttcccgtatc
gtggatgacctgaaggatgaagctgaacagtacagaaaaatggtcatggagaccattgag
aaaatcatgggcaaccttggtgcagctgacattgatcacaaactggaggagcagcttatt
gacggtatcctgtacgccttccaggaacagaccactgaggactctgtgatgctaaacggc
ttcggtacggtggtaaatgcactgggcaagagagttaaaccgtacttgcctcagatctgc
ggtacagtgctgtggcgtctgaacaataaatccgccaaagtccgtcaacaggctgctgac
ctgatttctcgtacagcggtggtcatgaagacatgccaagaggaaaagctcatgggccat
ctgggtgtagttttatatgagtatctgggagaagaataccccgaagtgctcggtagcatt
cttggagcccttaaagctattgtcaatgttattggtatgcacaagatgacgccgcctatc
aaggacttgcttccacgtttgactcccatcttgaagaacagacatgagaaggtgcaagag
aactgcattgatctagtgggcagaatcgctgacaggggtgcagagtatgtgtctgccagg
gaatggatgcgcatctgttttgaattgttggagttgttgaaagcccacaagaaggccatc
cgcagagctactgtcaataccttcggttacattgccaaggccattggtcctcacgatgtg
ctggcaacgttgctcaacaatctgaaggtgcaggagcgtcagaaccgtgtgtgcacaacg
gtagccatcgctatcgtggctgagacgtgttcgcctttcactgtgcttcctgcgttgatg
aacgagtaccgtgttcccgagctaaatgttcagaacggtgtcctaaagtctctgtccttt
ctgttcgagtacattggtgaaatgggcaaagattatatctacgctgtcactcctttgttg
gaggatgctctgatggaccgggatcttgtacacaggcagacagccagtgctgtggtgcag
catatgtctctgggagtttatggctttggctgtgaagattctctcaatcatttgctcaac
tatgtttggccaaatgtcttcgaaacgtctcctcatgttatccaagccgtcatgggggcc
ctcgagggtctgcgggtggcaattggaccctgccgcatgctgcagtattgcttgcagggt
ttgttccatcctgcacgcaaagtgcgtgatgtgtactggaagatctacaactccatctat
attggctcccaggatgcactgatcgcacattatcctcttgtctacaatgatgagaagaac
tcatacgttcgctatgagctggagtacttcctgtga

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