Carassius gibelio (silver crucian carp): 128019969
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Entry
128019969 CDS
T08819
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128019969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128019969
03021 Transcription machinery [BR:
cgib03021
]
128019969
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
128019969
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
128019969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Motif
Other DBs
NCBI-GeneID:
128019969
NCBI-ProteinID:
XP_052462375
LinkDB
All DBs
Position
A9:21746598..21768026
Genome browser
AA seq
714 aa
AA seq
DB search
MRTALFMSRYRPHRFVCFDCINRNLTCFTLFNQHSVDSRMSNPSETSKCAMESGDESTGA
QTNGLDFHRQTVQTTSAITNAHAQALLQQLTFTPAQQQLLLQQAQAQLLAAAVQHSASQQ
SNTTGASISASAATPITLSQPIQITPQLQQLQQQQNLNLQQFVLVQPGHHIATQLQPTQF
IISQTPQGQQSLLQAQNLLTQLPQSQANLLQTQPSITLATQPATPTRTIAATPIQSLPHS
QTTPKHIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTIS
RFEALNLSFKNMCKLKPLLEKWLNDAVCAENQTSDQALSSPSSLGSPGLGLEGLNRRRKK
RTSIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPS
SGSAISTPIKAIFSPTTALALSTASLVTSNTPTTMTVNPVMPLTSTSVSSFTGTTVGSAT
TNTASVISTAPVVTTAASSPSISPSPSAAQASSSEQASAQEILTAVSQAPCSLATTLCTG
QVMVAAPSLSAALQGATQLPTSASIAAMAAAAGLNPGLMASSQFNPGGALLSLAPGGLGS
TLSPALMSNSTLATIQGLWSALASSGTLPITSLDGSGNFLFANTCAGSTPNLVTAPLFLN
PQNLSLLASNPVSLVSAGGATGALNLHITTDAHQSAVTTATMPASTITTASKAQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactgctctctttatgtccagatacagacctcaccggtttgtgtgctttgattgc
atcaacagaaatctcacctgtttcaccttatttaaccagcactccgtagattctagaatg
agtaatccatcggaaacaagtaaatgtgcaatggagagcggggacgaaagcactggtgcc
caaacaaatggactggactttcacaggcagactgtgcaaacaacaagcgcaatcaccaac
gcacacgcacaggccttgctccaacagttgacttttactccagcgcagcagcagttattg
ctgcagcaggctcaggctcagctcttagcagcagcggtgcagcattcagccagccagcag
agcaacactacaggagccagcatctctgcctctgctgccacccccatcaccctctcccaa
cccatccagatcacacctcaattacagcaactgcaacagcagcagaacctcaacctgcag
cagtttgtgctggtccagccgggccaccacatcgcaacacagctgcagccgacgcagttc
atcatctcgcagacaccacagggccagcagagtctcctgcaggcccagaaccttctaact
caactacctcaaagccaagccaacctcctgcagacccaaccgagcatcacacttgccaca
cagcctgctacacctacacgcacgatagcagcgacccccatccaatcccttcctcacagc
cagacgacaccaaagcacatcgacacacccagcctggaggagcccagcgacctggaggag
ctagagcagtttgccaagaccttcaaacagcgacgcatcaaactgggcttcacgcagggg
gatgttggccttgccatgggaaaactttatggaaacgacttcagccagaccaccatttct
cgctttgaggccttaaacctgagctttaaaaacatgtgcaaactgaagcctctgcttgaa
aaatggctcaatgatgcagtttgtgcagagaaccagacgtctgaccaggccctgtccagt
cccagctctcttggctcgcctgggctgggcttggagggtctgaaccggcgccgcaagaag
aggaccagcatcgagaccaacatcagagtggccttagaaaagagctttctggagcagaac
caaaaacctacctctgaggagatcaccatgattgcggaccagctcaacatggagaaggag
gtgatccgagtatggttctgtaaccgcagacagaaagagaagaggatcaacccacccagc
agcggcagcgccatcagcactcctatcaaagcaatcttctctcccactacagctctggca
ctgagtacagcaagtcttgtgaccagtaacacaccgactacaatgactgtaaacccagtt
atgcctctcaccagcaccagtgtctccagttttactggcacaactgttggctcagctacc
actaacactgcatcggtcatctccactgcacctgtagtcaccacagcagcatcctctcct
tcgatcagcccttccccctccgcagcacaggcgtcctcctcagagcaggcttcagctcag
gagatattgacggcagtaagtcaggcaccttgctccttggcgacaactctgtgcactggg
caggtgatggtggcggcacccagcctctcagccgctctgcaaggagccactcagctgccc
accagcgccagcatcgctgccatggctgcagccgcaggcctcaatcctggcctcatggcg
tcctcacagttcaatcctggcggagctcttctaagtttggcacctggtggtcttggaagc
actttgagtccagcactgatgagcaacagcaccttggccactatccaaggtctgtggagc
gctctggcatctagtggcactttgcccattacatctctggacgggagcgggaactttctg
tttgccaacacctgtgctggcagcacccctaacctcgtgacggcacccctctttttgaac
cctcagaacttgtcactgcttgccagtaacccggtcagcctggtgtctgcaggaggggcg
acgggagccctcaacctgcacatcaccaccgatgcccaccagagcgctgttaccactgca
actatgcccgcctccaccatcaccacggcctctaaggcccagtaa
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