Carassius gibelio (silver crucian carp): 128020016
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Entry
128020016 CDS
T08819
Name
(RefSeq) CLIP-associating protein 1a
KO
K16578
CLIP-associating protein 1/2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
128020016
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgib04812
]
128020016
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
128020016
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
128020016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
MMS19_C
HEAT_DAAF5
ParcG
Paxt-1_C
Ipi1_N
KH_DEAH11_1st
TAN
Motif
Other DBs
NCBI-GeneID:
128020016
NCBI-ProteinID:
XP_052462478
LinkDB
All DBs
Position
A9:23586224..23675853
Genome browser
AA seq
1567 aa
AA seq
DB search
MEPNMEYCLTQVLQKDVARRLQVGSELIDYITDADKCQDLESDQTALDKLVDGIATSWVN
SSNFKLALLGMDLLSALVTRLQDRFRPQVGTVLPSLIDRLGDAKDQVRDQDQTLLLKIME
QSATPQYIWDRMLGGFKHKNNRTREGVCLCLISTLNTYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMNCLVEIYRHVGEKVRIDLSKKGLPQSRLNVIFSKFDEVQRSGNMILSSGSDK
NFDDEDSVDGGRSSSSSSSKCFSNSRRGGSMGSMRRPSSASGSRAPGKDSVSAGAVDEED
FIKAFEDVPAVQIYSSKDLEDSLNKIREILSDDKQDWEHRVTALKKVRSLILAGATQHEG
FLQHLRLLEGAFKSSAKDLRSQVVREACITLGHLSSVLGNKFDHGAESIMPTLLNLVPNS
AKIMATSGVAVIRIILRQTHFPRLIPIITSNCTSKSVAVRRRCFEFLDLLLQEWQTHTLE
RHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESSYQKALQSHLK
SSDSVVSLPQSDRSSSSSQESLNRPLSVKSVIGGPVTRSKVISSRVSSTPGALQRSRSDI
DVNAASSAKSRMSTATSPSPFSSAAALPPGSYASLGRVRTRRQSSGSAVSANSTVTDSRG
RSRAKVVSQSQRSRSANPTSAGSRSSSPGKLLGHAYGRIPRATAPATPSDKYSKIPRSQG
CSRETSPSRLGIARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFTPLASRRHSRSTSAL
STAEPVGQSDRLGLIHQARISASVNAMRVLNTGTEVEAAVADALRKPLRRRYESDDDANS
DASSACSERSYSSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRIL
SRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITVHREDLQDWLFVLLTQLLKKMGA
DLLGSVQAKVQKALDVTRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQM
DPADFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALPKTF
QDGATKLLHSHLKNSSNTSSVSSPSNTMGRTPPRHPTSRTSPLTSPTNCSHGGLSPSRLW
GWSVDGLLKHPSPSPPPPTPPSHPSIPAGPSHRAFRCALSPSMLEYDTENMNSDEIFSSL
RGVTEAIQSFSYRSQEDLNEPIRRDGKKVDAAGKEGASPGSDARLGLDVMEGGRTALDNK
TSLLNTPSPRSFAVPRSREFAPYGYGDTITAFDKSALKEAVFDDDVEQFRDCRRQDCGEN
KMVHPKGFTSDLVADLLKELSNHNERVEERKGALIELLKIAREDSLAVWDEHFKTILLLL
LETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTIMKTLEAHKDTHKEVVRAAEEAA
STLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVVERIARESLHQLLPDIIPGLLQ
GYDNTESSVRKASVFCLVSIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSS
SDMSSYS
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaacatggagtactgtctgacccaggtgctacagaaggatgtggcccgcagg
ttgcaggtgggttcggagctcatcgactacatcacagatgcagacaagtgtcaagacctg
gagagtgaccagactgcgttggataaattggtggacggtattgccacctcttgggttaat
tccagcaatttcaagttggctttgttgggaatggacctgctatctgccttagtgacgaga
ttacaggaccgatttcggccccaagttggtacagttttacccagcttgatagatcggtta
ggtgatgccaaagatcaagtcagagaccaagatcaaaccctgctgctgaagatcatggag
cagtcagctactcctcagtatatatgggaccgaatgttggggggtttcaaacacaaaaac
aaccggacaagagagggagtctgtctctgtctcatctcaactctgaacacatacggtgcc
caaggcttaaccctgagcaaaattgtaccacatatatgtaatctactcggagaccccaca
agtcaggttcgggatgcggctatgaactgccttgtggaaatataccgacatgttggagag
aaggttagaattgaccttagcaaaaaaggactgccgcaatcaaggttgaatgtaattttc
agcaaatttgatgaagtccaaagatctgggaacatgatcctctcctcaggttcagataag
aactttgatgacgaggactccgtggatgggggcaggtcctcctcctcttcctcttctaag
tgcttctccaacagcaggagagggggcagcatgggctcaatgagacgacccagttctgcc
tctggatccagggctccagggaaggacagtgtcagtgcaggagctgtggatgaagaggat
ttcatcaaggcttttgaagatgtacctgcagtgcagatatattccagcaaggacttggag
gactccttgaataagatccgtgaaattctgtcagatgacaagcaagactgggaacaccgt
gtcactgctctgaagaaagtgcggtcactgattctggctggtgcaactcaacatgagggt
ttccttcaacatctccggcttttagaaggtgccttcaagtcatccgctaaagatcttcgg
tcccaagtggttcgagaagcctgtatcacattagggcatctgtcttcagtgctggggaat
aaattcgatcacggggctgaaagcatcatgcctacgctgctaaacttggtgcccaacagc
gccaaaattatggccacatccggagtggcagtcatccgaatcatcttgcgacaaacacac
ttcccacgccttatcccgattatcaccagcaactgcacttctaaatctgtggctgtccga
agacggtgttttgagtttttagacctgttattgcaagaatggcagacacacactctagag
aggcatgtggccgttctaactgaaaccattaagaaggggatccatgacgccgactcagag
gccagatctgtggccagaaagtgttactggggattccatggccattacagtcgagaggca
gagcacctgtttcaggcgttggagtcgtcctatcagaaggccctccagtctcatctcaag
agttcagacagtgtagtgtctctaccgcagtccgaccgctcctcctcaagctcacaggag
agcctcaatcgaccgctgtcagtgaagagtgtcattggaggccctgttacaagaagtaaa
gtgatcagctctagggtgtcctcaacccctggtgccctccagcgttcccgcagtgacata
gacgtgaatgccgcctccagtgccaaatctcgcatgtccactgcaacctccccatctccc
ttcagctctgctgcagctctgcctcccggctcctacgcctccctgggtcgtgtgcggacg
agaaggcagagctcagggagtgcggtcagtgccaacagcactgttacagacagccgtggt
cgaagcagagctaaagtggtctctcagtcccaacgatccagatcagctaaccctactagt
gccggcagccggtccagctctccagggaagctcttgggacatgcatatggcagaattcct
agggccactgcaccagcaacaccctcagacaaatactcgaagatcccaagaagccaggga
tgcagccgtgaaaccagtcccagcagattgggcatagcccggagcagtcgcatcccccgc
cccagcatgagtcaggggtgcagccgtgacaccagtcgcgagagcagccgtgacacaagc
cccgctcggggcttcactcctcttgcctcccgacgtcactctcgctccaccagcgcgctg
tccacggccgaacccgtgggccagtcagatcgcttaggcctgatccatcaggctcgcatt
tctgcatcggtcaatgctatgagggtgctcaacactggcacagaagtggaggctgcagtg
gctgatgctttgcgcaagcctttgagaaggaggtacgagtctgatgatgatgccaacagt
gacgcatccagcgcctgctcagagcgttcctatagttcccgtaatggaggcattcctcac
tacctgcgtcagaccgaggacgttgctgaggtgctaaaccactgcgccagttccaactgg
tccgagaggaaggagggcctgctgggtttgcaaaacctgctaaagagtcagcgcattctt
agccgtgtggagctcaagaggctgtgtgagatcttcaccaggatgtttgcagatcctcat
agcaagagagtgtttagcatgttcctggagactctagtggatttcatcaccgtgcacaga
gaggatctccaagactggctctttgtactgctcactcagctactaaagaaaatgggagct
gacctcttaggctcagtccaagccaaggtccaaaaggctctggatgtcacaagggagtct
ttccccttcgaccaacagtttaacatcctaatgagattcattgttgatcagactcaaacc
cccaatctgaaggtgaaggtggccatcctgaaatacattgagtccctagcacggcagatg
gaccctgcagactttgtgaactcaagtgaaaccagattagctgtgtctcgcattatcacc
tggaccactgaacccaagagctctgacgttagaaaagctgcccaggtggtgctgatctca
ctctttgagttaaacactcctgagttcaccatgctgctgggcgctctgcctaaaacattc
caggatggagccaccaagctcctgcatagccatctgaagaactcgagcaacaccagcagt
gtgagttcaccaagcaatacaatgggccgcacgccaccccggcaccccaccagcaggacc
agtcctctaacctcgcccacaaattgctcccacgggggtctgtcacccagtcggttatgg
ggttggagtgtcgatgggctcttaaagcacccttctccctctcctcctcctcctactcct
ccgtctcacccctctattcctgcaggcccctcccacagggccttccgctgtgcgctctca
ccaagtatgctggagtatgacacagagaacatgaattctgatgagatcttcagctcgctg
cgcggtgtcacagaagccatccagagcttcagttaccgcagccaggaggacctgaatgag
ccaatcagacgtgacgggaagaaggttgatgctgctgggaaggaaggggcatctccgggg
tctgatgcaagactgggattggatgttatggaagggggtcgaaccgctttggataacaag
acatctttgcttaacacaccgtccccgcggtctttcgctgtgccgcggtcaagagagttt
gctccctatggctatggagacacgatcacggcctttgacaaaagcgccctgaaggaagct
gtttttgatgacgacgtggagcagttccgagactgccgtcggcaagactgtggtgagaac
aagatggtgcatcccaagggctttacttctgatctggtggcagacttactgaaggagttg
tctaatcacaatgaacgagtggaggagaggaagggggctttgatcgagctgttgaagatc
gctcgtgaggacagtctggctgtgtgggacgaacacttcaaaactatcctattgctgcta
ttggagacactcggggacaaggatcacactatccgagcactggccttacgggttctgaag
gagattctgaggaaccagccagcacgcttcaagaactatgcagaactcacaatcatgaaa
acactagaggcccataaggacactcataaagaggtggttagggcggctgaagaggctgcc
tctacgttggctggctccattcacccagagcaatgcatcaaagtgctgtgtcccatcgta
cagactgcagactatcccatcaacctggctgctattaagatgcagaccaaagtagttgag
cgcattgccagggagtcgctgcatcagctgctgcccgacatcatccctggcctcctacaa
ggctatgataacaccgagagtagtgttcgcaaggccagcgtgttctgtttggtgtccatc
tactctgtgattggtgaggagctgaagccacacttggcccagctcacgggtagcaagatg
aagttgctaaatctgtatattaagagggcccagaccaccaacagcaacagcagcagttct
tcagacatgtcgtcttacagctag
DBGET
integrated database retrieval system