KEGG   Carassius gibelio (silver crucian carp): 128020103
Entry
128020103         CDS       T08819                                 
Name
(RefSeq) histone deacetylase 4 isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    128020103
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    128020103
Enzymes [BR:cgib01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     128020103
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     128020103
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln
Other DBs
NCBI-GeneID: 128020103
NCBI-ProteinID: XP_052462675
LinkDB
Position
A9:28584919..28782106
AA seq 1051 aa
MTSHSRPDGLPSQEHPLELLKPSGVNHIPPVDVSAALPLQVPPSAIPMDLRVDHQFALAP
TDPAQREQQLQQELLALKQKQQIQRQLLIAEFQRQHEQLSRQHEAQLHEHVKHQQDLLAM
KHQQELLEHQRKLERHRQEQELEKHQREQKLQLLKNKERGQESAVASTEVKMRLQEFVLN
KKKALAQRSLNHYLPNDPRYWYGKTQHSSLDQSSPPQTGISTYNHPVLAMYDPKDDFPLR
KTASEPNLKLRSRLKQKVTERRSSPLLRRKDGQITTAKKRSLDMAESACSSAPGSGPSSP
NNSSNNITNENGIAGSMSNSPVEPSLAHRLAGREGPVSQLSLYTSPSLPNITLGLPATGP
SSVASGQQDGDRMAVPGLQPGIPITTPFMPGAHLPSYLAASSLEREGGSAHNTLLQHMVL
LEQSAAQNSLAGLGGVSLQSHPIHKLRQHRPLGRTQSAPLPQNAQALQQLVVQQQHQQFL
EKHKQQFQQQQLHISKMMAKPNEPGRQHESHPEETEEELREHQGLDDSTEGHPHGVTIKQ
EPPDELEEEFQQRERQAEEELLFRQQALLLEQQRIHQLRNYQASMEAAGLSVTFPGHRPL
SRAQSSPASATFPIVVQEPPAKPRFTTGLVYDSLMQKHQCMCGNSNIHPEHAGRIQSIWS
RLQETGLRGQCECIRGRKATLEELQTVHSEAHVLLYGTNPLRQKLDSSVTPMFVRLPCGG
FGVDSDTIWNEVHSSSAARLAVGSVVDLVFKVASGELRNGFAVVRPPGHHAEESTPMGFC
YFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYVSLHRYDDGNFFPG
SGAPDEVGIGPGVGFTLNMAFTGGLEPPMGDADYLAAFRTVVMPIANEFAPDVVLVSSGF
DAVEGHPPPLGGYMLTAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALL
GNELDPLHEDVLQQRPNPNAIHSMEKVLEVHSKYWRSLQRSASTLGYSLLEAQRRETEEA
ETVTAMASLSVANKHMGKRTEEEPMEEEPPL
NT seq 3156 nt   +upstreamnt  +downstreamnt
atgacttcccacagccgcccagatggacttcccagtcaagaacatccactggaacttctg
aagccatctggagtcaaccacattcctcctgttgatgtgagtgcggcgctgccactgcaa
gtgccgccttctgccatccccatggatctgcgtgtggatcaccagttcgccctggcgccg
acggacccggcccagcgcgagcagcagctgcagcaggagcttctggccctcaagcagaaa
cagcagatacagaggcagctcctgatcgcagagtttcagcggcagcacgagcagctctcg
cgccagcatgaagcgcagctgcacgagcacgtcaagcatcagcaggacctcctggccatg
aaacatcagcaggagctcctggaacaccagcggaagttggagcgccatcgtcaggagcag
gagctggagaaacaccagcgggaacagaagcttcaattactcaaaaacaaagaacgcggc
caagagagcgctgtggcgagcactgaggtgaagatgaggttgcaggagttcgtcctcaac
aagaagaaagcgctggcccagaggagcctcaaccactacctgcccaacgacccgcgctac
tggtacgggaaaacccagcacagctccctggaccagagctcaccgcctcagacagggatt
tccacttacaaccacccggtgctggcaatgtacgaccccaaagatgacttcccgctccgc
aagacggcatctgagcccaacctgaagctgcgatccaggctgaagcagaaagttacggag
cgcaggagtagtccgctgcttcggaggaaggatgggcagatcaccactgcaaagaagcgt
tctctcgacatggcagaatcggcatgcagcagtgctcctggctccggtccaagttcaccc
aacaacagttcaaacaatattaccaatgagaacggcatcgctggatcaatgtccaacagt
cccgtggagccatctttggcgcacagactcgcaggcagagagggtcctgttagccagctg
tctctgtacacatcgccctcccttcccaacatcaccctgggcctgccagccaccggcccc
tccagcgtggcgtctggccaacaggatggtgacagaatggctgtgccaggcttacagcca
ggaatacccataaccactccgttcatgccaggagcccacctgccttcttacctggccgcg
tccagcttagagcgggagggcggctcggcacacaacactctcctgcagcatatggtgctt
ctggagcagtcggccgcacagaactccctcgcaggcctggggggcgtgtccctgcagtca
catcccatccacaagctccggcagcatcggcccctgggacgcacacagtcggcccccctg
ccccagaacgcccaggcgctgcagcagctggtggttcaacagcagcaccagcagttcctg
gaaaaacacaagcaacagttccagcagcagcagcttcacatcagcaagatgatggctaag
ccgaacgagccgggccgacagcacgagagccacccggaggagacggaagaggagctgagg
gagcaccaggggctggacgactccacggagggtcatcctcacggggtcaccatcaaacag
gaaccgccggatgaactggaggaagagttccagcagagagagagacaagccgaggaagag
ctgctcttcagacagcaagctcttctgttggagcaacagaggatccatcagctgaggaac
tatcaggcgtctatggaggcggccggactgtctgtgaccttccctggccatcggcccctg
tccagagcacagtcgtccccggcctctgcgacctttcccattgtggtccaggagccacca
gccaaaccgcgctttaccaccggtctggtgtatgactccctgatgcagaagcaccagtgc
atgtgtggaaacagtaacatccaccccgaacatgccggacgcatccagagcatctggtca
cgtctgcaggagacggggctgcgcggccagtgtgagtgtattcgaggcaggaaagccact
ctggaggagctgcagacggtccactctgaggctcatgtgctgctttacggaactaaccct
ctcagacagaaactggacagctcagtgacaccgatgttcgtgagactgccgtgtggagga
ttcggggttgacagtgacactatctggaatgaagttcactcgtccagtgctgctcgtctg
gctgtggggtctgtggtggatctggtgtttaaggtggcttcaggagagctcaggaacggc
tttgctgtggtgcgacctccaggacaccacgctgaggagagcactcccatgggattttgc
tatttcaactcggtggccattgcagccaaactcctgcagcagagactcaacgtcagtaag
attctcattgtagactgggatgttcaccatggcaatgggactcaacaggccttctacagt
gaccctaatgtcctgtatgtgtctctccatcgctacgatgatgggaacttcttccctggc
agtggagcccctgatgaggtgggcattggtccaggcgtgggctttactttgaacatggcc
ttcaccggtggtctggagccaccaatgggggacgcagactatctagcagcattcaggacg
gtggtgatgcccattgcgaatgagttcgctccagacgtggtgctggtttcttcaggcttc
gacgctgtggaggggcatccaccacctctgggaggatacatgctcaccgccaaatgtttt
ggctacctgaccaagcagctgatgggactggccggtggccggctggtgctcgcgctggag
gggggtcacgacctcaccgccatttgtgatgcctcggaagcatgtgtttctgctttgctt
ggaaacgagttggaccctcttcatgaagatgtgcttcaacagcggccgaaccccaatgcc
attcactccatggagaaagttctggaagtccacagtaaatactggcgctcgctgcagaga
tctgcctcgactctgggctactcactgctggaggctcagagacgtgaaactgaagaggca
gagacggtgaccgccatggcctcgctgtctgtggccaacaagcacatgggaaagaggaca
gaggaggaacctatggaagaggaacctccattgtag

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