Carassius gibelio (silver crucian carp): 128020252
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Entry
128020252 CDS
T08819
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128020252
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
128020252
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
128020252
NCBI-ProteinID:
XP_052463005
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Position
A9:complement(25725207..25732074)
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AA seq
988 aa
AA seq
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MERGLLFARILGVTLVCVSMRSQVVSEERTVRYKIYEEVRPPTVIGTLASNVTWTPDKTR
RTFPGIRFKLMSPSTGSFIRFRESDGRLTVEERVDRERVCKRSPRCVITFDVAFVSAEQF
ELFHVEVDVLDVNDNSPEFPRAECTVEISESAALGTRIALDAAEDADVGSNSIQTYHLSE
NTHFSIDVVTRVDGVKYAELVLVKELDRESRAFFALKLVAADGGHPARSGATNVTVQVKD
ANDNSPLFDHSHYSVDVPEDTPVDSLLLDLNAVDPDEGLNGQVVYEFGKQVTKKIRQLFK
LDYKTGHLILQSPVDYEDETTYEIDVQASDLGNNPVPSVCKIIINIRDVNDNPPEIILTS
ITSVTDGVAHVSEATGPDILVALISIRDLDSGANGQVSCTLNGGHENFRLKRAYEGSYTI
VTMAPLDREKIAEYNLTVVAEDFGVPPLRTVTHYIIRLTDVNDNAPTFSAKTYEGFIEEN
RLPGTYITTILASDQDSGLNGEITYELFDSDTNSVSRFAIMNQAGNVYALQSFNYEVTKR
LDLRVQASDRGWPQLHSNAVLIINIVDQNDNTPSITQPPLVNGSAEIQLPRDAPPGYIVT
QIVAIDPDADLNAELTYKLCDGGNLGFAIDPNTGEIYINRKIAYDEYDLWKVVLTVNDNG
HPSLTSTATIHFTLTESVPSNANFYDEREDGEPKQWMLILILALTSSSLLFLAILLLILC
KSRKNGQKRQANVPDTVDIPYAKEHNTVSMISSQTANVFDTDAFHNTNVIGTPEKLHSSV
QATAEVFNETSQTFKSKYRSVVGEIDGYSTLPGYGKDNARPITIWKGNSMMTIAVRDPQI
SGKDSGKGDSDVNDSDSDISEGLKKDYSSYKGLWACTSECRILGHSDRCWSPSVSRTSGS
INNRHLSTFSRTRPCSNATLQRITYDTQPNRSVALHSLTEDQQSQYDYIHVCSPQSQRRR
DSQNIDVKVFTHSTEPIATESPSRFTEA
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaggacttctgttcgcgcggatacttggagtcacgctcgtctgcgtttcaatg
cggtcacaggtcgtttctgaggaacggacggtgaggtataagatatacgaggaggttcga
ccgccgacggtcatcggaactctagccagcaatgtgacctggaccccggacaaaacgcgc
aggactttcccaggcatcaggtttaagctcatgagcccgtccaccgggtccttcatccgg
ttcagggaaagcgatgggaggctgacggtagaggagcgcgtcgaccgcgagcgcgtctgc
aagcgcagcccgcggtgcgtaatcactttcgacgtcgccttcgtgtccgccgagcagttc
gagctcttccacgtcgaggtggatgtgctggacgtgaacgacaactcaccggagtttccg
cgcgccgaatgcacagtcgagatctccgagagcgcggctctggggacgcgcatcgcgctg
gacgccgccgaggacgcggacgtgggctccaactctatccaaacctaccatctgagcgag
aacactcactttagcatcgatgtcgttacgcgggtggatggggttaaatacgcggagctg
gtgctcgtcaaagagctcgaccgcgaatcccgcgcttttttcgcgctcaaactcgtggcg
gcagacggcgggcatcccgcgagaagcggtgccactaatgtcacggtccaagtgaaggat
gctaatgacaacagcccgctgtttgaccacagccattactctgtggatgtcccagaggac
acccctgtcgattcactactgctagacctaaacgctgtcgatccagacgaagggctcaat
ggacaagtcgtgtatgaatttggcaaacaagtcacaaaaaagatcagacaactgtttaaa
ctggattataaaactggacatttgattttgcaaagccctgttgattatgaagacgagacg
acatatgagatcgacgtacaagccagcgatttagggaacaatccggtgccctccgtgtgc
aaaatcatcatcaacatcagagatgtgaacgacaacccgcctgaaatcatcctaacgtcc
atcacgtcagtaacagatggtgttgcacatgttagcgaagctacaggtccagacatcctg
gtggctttaatcagcatcagagacttggacagtggagcgaatggtcaagtgagttgtact
ctgaatggcggacatgaaaacttcaggcttaaaagagcgtatgaagggagctacacgata
gtcacaatggcacctttggatagagagaagatcgcggagtataatttaaccgtggtggct
gaggacttcggtgtaccgccgttacgcacggtaactcattatattatacggctaacggat
gtcaacgacaatgcaccgacattcagcgctaagacatatgaaggtttcattgaggagaat
cgacttccaggtacctacatcaccacgattttagccagcgatcaggattctgggcttaac
ggggaaattacctatgagctttttgactcggacaccaacagcgtttccaggtttgctatt
atgaatcaagcggggaacgtttatgccttgcaaagtttcaattacgaagtcacgaagcgg
ctcgatcttcgcgtccaggctagcgaccgaggatggccgcaacttcacagcaacgctgta
ctgatcatcaatatagtcgatcagaatgacaacacgccttcgataacgcaaccaccactc
gtcaacggatctgccgaaatccagcttcccagagacgcgccgcccggttatatcgtgacc
caaatcgttgcgatagatcctgacgccgatttgaatgcagagctcacttacaaactctgc
gacggaggcaatttgggtttcgccatcgatccgaatacgggggaaatatatatcaaccgc
aaaatcgcttacgatgagtatgacttatggaaagtcgtattgacggttaacgacaacggt
cacccgtcgctaacctcaacagctacgattcatttcaccctaaccgagtctgtgccctca
aatgccaatttctatgacgaaagagaggacggcgaaccaaaacaatggatgcttatttta
atcttggctttgacgagttcctcgttgctgtttttggctattttattgctcatactatgc
aaaagtcgcaaaaatggccagaagagacaagctaacgtccctgacacagtggatattcct
tacgctaaagagcacaacacagtgtcgatgatctccagccagacggccaatgtgtttgac
acggatgcatttcacaacacgaacgtcatcggcacgcctgaaaaactacacagcagcgtg
caggcaacggctgaagtttttaacgaaacctcacagaccttcaagagcaaatataggagt
gttgtgggggaaatagatggatattccactttgcctggttatggtaaagacaacgcccga
cccatcacgatatggaaagggaactctatgatgaccatcgcagtcagagacccacagatc
agcggcaaagacagcggaaaaggagacagcgatgttaatgacagtgattctgacatcagt
gaaggcctcaagaaagactatagttcatataaaggtctgtgggcttgtaccagcgagtgc
aggatcctgggtcactcggacagatgctggagcccgtctgtgagcagaaccagcgggagc
attaataacagacatctctcgaccttctcaaggacgaggccgtgctcaaatgccacgctt
cagaggatcacttacgacacgcagcccaacagaagtgtggccttgcacagccttactgaa
gaccagcagagtcagtatgattacattcacgtgtgctctccacagtcacagcggagacga
gactcacagaatatagatgtgaaagtcttcacacactccaccgaacccatcgccacagag
agtccctccagatttacagaagcctga
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