Carassius gibelio (silver crucian carp): 128020253
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Entry
128020253 CDS
T08819
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128020253
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
128020253
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
RRF
Motif
Other DBs
NCBI-GeneID:
128020253
NCBI-ProteinID:
XP_052463006
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Position
A9:25754113..25759262
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AA seq
917 aa
AA seq
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MKFFCSYFMLLCMISNVSCMTTKYITYEEDAPGTEIGNLSQDLKIDPAEDPETSFKFIQK
TNAMIGMRQIDGLLTVGEVIDREQLCQRSPQCLITFDVVAFSKEKFQLIHVEVEVKDIND
HSPRFTRNETHLDISEDALLNSRFPLDVAVDRDVGDNYVQSYRVSHTNHFAVEVSTHEDG
ETSAELVLIKTLDRETEEFYTIEVTATDGGTPAKSGSMTVYIRVLDFNDNSPTFEHNSLK
VELSEDSPIGSRVLKVHAFDPDAGVNGEVVYGFVEGSVSEVTRVFQIDHITGEVTLKDSV
DYETKKSYELHIQASNLGDNSVSSNCRAIVDIVDVNDNAPEITIKPMTSTSDGVAFITES
AAKESFVALISTSDADSGPNGQVQTKLEGHTHFKLQQAYSDTFMIVTTTTLDREAIPEYN
LTVISEDLGSPPFKTVKHYTIRITDENDNAPMFSKAVYDVSVIENNIPGSYMTTVVARDL
DVGKNGKVSYSLIDSELPDGSPISTFVSIDPQSGSLYTLQSFDFETLKEVEFAVEASDKG
FPPSSSTTLIQIHVADENDNFPYFTYPVLRNNSADVPIPFNARSGYLALRLTANDEDSDV
NGELSFHILEDDGKLFSIDKDSGEIVLKRKLDASYGDILQIKVSVVDSGRKPLSSTASVR
FVVTDTGAQEDQVVILLRSQNEETLAFDVWTAVIIGFAGCCVLLLTAIIILTVTCTFKRR
RRHFGRNGLYGSTPISKNSSSGSNIFSGPNALLRNEGDSMQPLYEDKSLDFEEKLFLPCK
PFEQTLLWQDEKYCMQKSVTSDTDQLSVKDSGEGDALKPGLMTFQPLARGAFKSAGDWKS
NAQVIQSPNMHVPPISFTPVHNTTLISASSWRESRGKSNMLNTQRRTGTHQTRVEEQAET
VNNAFLLSASSELATTF
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcttctgcagttacttcatgcttctgtgcatgatttccaacgtcagctgcatg
acaacaaaatacatcacatatgaggaagacgcgcctgggacagagattggaaacctttct
caagacctgaaaattgacccagcggaggatcctgagacatcattcaagttcatacagaag
acgaacgccatgattggcatgaggcaaatcgacgggcttttaacagtgggagaagtcatc
gaccgagagcagctttgtcaacgatctccacagtgtcttataacttttgacgtcgtggct
ttctcaaaggagaaattccagctcattcatgtcgaggtcgaggtgaaagacattaacgat
cattcacctcggttcacacgcaacgagacgcatttggatatatcagaagacgcacttttg
aactcacgatttccgctggacgtcgctgtggatcgcgacgtcggagacaattacgttcaa
agctaccgtgtttcacacacaaaccatttcgccgttgaagtcagcactcatgaggatgga
gaaacgtcagccgaacttgttttgatcaagacgcttgaccgagaaaccgaagagttttat
accatcgaggtgacggcgactgacggcgggacgccagcgaaatcaggctcgatgaccgtt
tacatccgagtgctggactttaacgacaacagcccgacgttcgaacacaactcgctcaaa
gtcgagctcagcgaagattcacccatcggctcacgtgtgcttaaagtacacgctttcgat
cccgacgctggcgtcaacggagaagtcgtgtacgggttcgtcgaaggctcggtgagcgaa
gtcacgcgtgttttccagatcgaccacatcaccggagaagtgaccctcaaagactccgtc
gactacgagaccaagaagtcgtacgagttacacatccaagcctctaatttaggcgacaat
tcggtttcgtcaaactgtcgggcaattgtcgacatcgtcgacgtgaacgataacgcaccg
gaaatcaccatcaaaccaatgacttccaccagtgacggagtggcgttcataaccgaatcc
gcagccaaagaaagtttcgtagcacttattagcacctcagacgcagattcgggtcctaat
ggccaagtccagaccaaattagaaggacatacgcatttcaagctacaacaagcgtacagc
gacacgtttatgatcgtaacaaccacgactttggacagagaagccattccagaatacaac
ctcactgttatttccgaagatttaggaagtcctccgtttaaaacggttaaacattataca
attcgcatcacagatgagaacgacaacgcaccgatgtttagcaaagccgtctatgacgtc
tcagtaatagaaaacaacattcccgggtcgtacatgactacagtagtcgcacgcgatctc
gacgttgggaaaaacggaaaagtctcctacagcctaatcgacagcgaacttcccgacggt
tcgccgatttctaccttcgtttccatcgatccccaatccggctctttgtacacgctgcag
tcgttcgatttcgagactctgaaggaagtcgagttcgccgtcgaagccagcgataaaggt
ttcccgccgtcatcaagcacgactttaattcaaatccacgtggcggacgagaacgacaac
ttcccgtatttcacatatcccgtcttacgaaacaattccgccgacgtcccgattcccttt
aacgctcggagcggctatttagcgttaagactgacggctaacgatgaagacagcgacgtt
aacggcgagctcagtttccatattctagaagacgatggcaaacttttttccattgataaa
gacagcggcgaaatcgtgttgaaacgaaagctcgatgcatcatacggagatatcctgcag
attaaagtctcagttgttgacagtggaagaaagccgctttctagcacagcaagcgtccgg
tttgtggtgacagatactggtgcacaagaggaccaggtggtcattttactccgatcccaa
aatgaagagactttagcgtttgatgtgtggactgcagtgattatcggcttcgctggatgc
tgtgtgttgttactgactgcgatcatcatcctcactgttacttgcacctttaaacgaagg
cgaagacactttggaagaaatggcttgtatggatcaaccccaatttccaagaatagctct
tccggctcaaatattttcagcggccctaatgcactcctcagaaatgaaggtgattcaatg
caacctctgtatgaagataaaagcctggattttgaggaaaagctattcctgccgtgcaaa
ccttttgaacaaacacttttatggcaagatgaaaaatactgcatgcaaaagagtgtcacc
agcgacacagatcagctgagcgtgaaggacagcggcgaaggagacgctctgaaaccaggc
ctgatgaccttccagccgctggccagaggtgcattcaagagcgcaggagactggaagagc
aatgctcaggttatacagagcccaaacatgcacgtccctcccatcagcttcacaccggtg
cacaacacgaccctcatcagtgccagctcctggagagagagccgtggtaaaagcaacatg
ttgaacactcagagacggacgggaacacatcagacacgggtcgaagagcaagccgagacc
gtcaacaacgcatttctgctttcagcttcatctgaacttgctactactttttaa
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