Carassius gibelio (silver crucian carp): 128020285
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Entry
128020285 CDS
T08819
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128020285
04121 Ubiquitin system [BR:
cgib04121
]
128020285
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128020285
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128020285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
GSH_synth_ATP
Dynactin_p22
Motif
Other DBs
NCBI-GeneID:
128020285
NCBI-ProteinID:
XP_052463085
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Position
A9:complement(26927351..26930394)
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AA seq
632 aa
AA seq
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MDAEETDLVANKNSTCVIWRYFGFEITDTEQRDVLCKICKIKVATSRGNTTNLYQHLKQH
REKYDECMTMKTQISKETGEGNKAQAVPRTKQCAITDVFASLTPYDKSSHRHKEITDSIT
HYLAKDMTPIHTVSKVGFQKMIRTLDKRYQLPSRNYFSQVAIPKLYNSRRDEVQKEMASV
TFFSTTTDLWSSRTSEPYISLTVHCVNEEFELKSRCLQTSYFPADHTEENIALGLREALA
AWDLCEERQVAITTDNGTNIVKAVELNQWTRIQCFGHRLHLAIENALKDNAQCINRATGI
CRKIVGHFSHSWKKRVALKEAQQELNLPEHAMVTDCSTRWGSTQKMIARVLEQQSALSKV
LSTDRKVRHLLPSWQDLEVLESVNKALSPLQDFTDALSGESYVSISCVKPALHLLNTSVL
AEDEADTELTKSLKTKILSYLNNKYEGTQDLLNFTTFLDPRFRTQYICEEETQTLKERAI
SELIEIHQQQSVAQSTAVMENDSLDVESPPAAKAKKKTLASFFKETTCTAPRTSLSSTFD
SMAQFREAVTAELNAYIYMPCVDHGEDPLKWWKFHKVNFPRLCKLAQKYLGIQATSSASE
RAFSTSGNVVSNHRSCLKPEKVDMLVFLAKNL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgaggagactgatctggtagccaataaaaactctacctgtgttatatggcga
tatttcggatttgagattactgacactgagcagagagatgtactgtgcaagatttgcaaa
attaaagtcgctacatcacgtggcaatacgacaaatttatatcagcacctgaaacagcac
agagaaaaatatgatgaatgcatgacgatgaaaacccagattagtaaagagacaggtgaa
ggaaacaaggcacaagctgttccccgaacaaaacaatgcgcaattacagatgtgtttgca
agtctcacgccatatgataagtcttcgcatagacataaagaaatcaccgactccataacc
cactacttggcaaaagacatgacgcccatacacaccgtaagtaaagtgggatttcagaaa
atgatccgcacactggacaagaggtaccagctgccctctcgaaactatttctctcaagta
gcgatacctaaactttataactcgcgccgtgacgaagttcaaaaggaaatggcttcggtg
acattcttttcaaccactacggacctgtggtcaagcaggacaagtgaaccgtatattagc
ttgactgtgcactgtgtcaacgaggagtttgaattgaaaagccgctgccttcaaacatcg
tatttccccgccgaccacacagaagagaacatagccttgggcttgagagaggcactggct
gcgtgggacctctgtgaggagcgtcaggtcgccatcactacagacaacggcaccaacatt
gtcaaagcagtggagcttaatcaatggactagaatccagtgttttgggcatagacttcat
ttggccattgaaaatgctctgaaagataatgcacaatgcattaacagagctactgggata
tgcaggaagattgtgggccacttctcccatagttggaagaaaagagtggccttgaaggaa
gcacaacaagagctgaacctcccagagcatgccatggtgacagactgctcaacacgatgg
ggttccactcagaaaatgatagcaagagtcctggagcagcaaagtgcgttgtccaaggtt
ctctctacagaccgcaaagtgcgacacctactcccttcatggcaggacctggaggtcttg
gaatctgtaaacaaggcactaagcccactccaggactttacagatgccttatctggtgag
agttatgtgagcatatcttgtgtgaaacctgctctgcatcttctgaacacctcagtgctg
gctgaagacgaagcagacactgaactgaccaaatcactgaaaacaaaaatccttagctac
ctcaacaacaaatatgaaggcacacaggacttgctaaacttcaccactttcctagaccca
aggttcagaactcaatacatctgtgaagaggagacccagaccttgaaggaacgagccatc
tctgaattgatagaaattcaccagcagcagtctgttgcccaaagcactgcagtgatggag
aatgatagcctggatgtggaaagtccacctgctgctaaagccaagaagaaaactctggcc
agtttcttcaaggaaaccacatgcacagcaccaagaacatcattgtcatccacatttgat
tccatggcacagtttagagaagcagtgaccgctgaactcaatgcttacatttacatgcca
tgtgtagaccatggagaagatccactgaaatggtggaagtttcacaaagtaaacttccct
aggctatgcaaactagcacagaaatatctgggcatacaagcaacaagctctgcatcagag
agagcttttagcactagtggtaatgttgtgtcgaatcatcgctcctgtctgaaaccagag
aaagtagacatgcttgtctttttggcaaagaacctctaa
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