KEGG   Carassius gibelio (silver crucian carp): 128020466
Entry
128020466         CDS       T08819                                 
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128020466
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cgib03400]
    128020466
Enzymes [BR:cgib01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     128020466
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     128020466
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     128020466
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128020466
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     128020466
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA DUF6480 zf-C2H2_6
Other DBs
NCBI-GeneID: 128020466
NCBI-ProteinID: XP_052463159
LinkDB
Position
A1:37662833..37667110
AA seq 347 aa
MPVCLLVSEDDSHKPIQLHHQQSVTLGRGPETKIKDKKCSREQVELRADCSRGFITVKQL
GVNPTSVDDVVVGKGNQVTIKPGQRLYIVNQQYPYRVKFTEDTSTPRSTGDLSKPSKRPH
QMSSEGNGEKIRSPANTSSTPRTDQHRMSDGSPPPKQTPPAESHKSGSAGHWSQGLKVSM
QDPKMQVYKDDQVVVIKDKYPKARYHWLVLPWDSISSLKALRSEHMELLKHMQRVGDQMV
QQCPDAHKLSFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFVESQDVIA
MLEHDGKVTVKEGTNELLKLPLRCHLCHKEQPTIPKLKEHLKTHLPS
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgcctgtgtgtttgctggtaagtgaagatgattcacataaacccattcagctacatcac
caacagtccgtgactctgggtcgaggaccagaaaccaagatcaaagacaaaaagtgctca
agagaacaagttgagttgagagctgattgcagcagaggatttatcactgttaaacagctg
ggtgtgaatcctacaagtgtggacgatgtggttgtgggcaaaggcaatcaggtgaccata
aagccgggccagagactttacattgtcaatcagcagtatccttacagagtaaagttcact
gaggacacgtccacccccagatctactggagacttgagcaaaccttcaaagagaccccat
cagatgagctctgaggggaacggagagaagatcaggagccctgcaaacacatcatcaaca
ccccggacagaccagcacagaatgtcagacggttcacctcctccaaaacagacaccgcca
gctgaatcacataaatcaggatcggctggccattggagccaagggcttaaagtatccatg
caggaccctaagatgcaggtgtacaaagatgatcaggttgtggtcatcaaggacaagtac
ccaaaggcgcgctaccattggctggtgctgccctgggactcgatctccagtctgaaggct
ctgcgctcggagcacatggagctgctcaaacacatgcagcgtgtgggagaccagatggtg
cagcagtgccctgacgctcacaaactgagcttccgtctgggatatcacgccatccccagc
atgagtcacgtccacctgcatgtaatcagccaggactttgactcgccgtgtttgaagaac
aagaaacactggaattccttcaccactgactactttgtggagtctcaagatgtcattgcg
atgctggagcatgatgggaaagtgacggtgaaagaaggcactaatgaattgctgaagctg
cctctgcgctgtcacttgtgtcataaagagcagccgacgatacctaaactaaaagaacat
ctcaaaactcacctgccttcttaa

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