KEGG   Carassius gibelio (silver crucian carp): 128020768
Entry
128020768         CDS       T08819                                 
Name
(RefSeq) polyubiquitin-B isoform X1
  KO
K08770  ubiquitin B/C
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03320  PPAR signaling pathway
cgib04120  Ubiquitin mediated proteolysis
cgib04137  Mitophagy - animal
cgib04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    128020768
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    128020768
   04137 Mitophagy - animal
    128020768
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    128020768
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgib04121]
    128020768
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    128020768
Ubiquitin system [BR:cgib04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   128020768
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   128020768
  Exosomal proteins of other body fluids (saliva and urine)
   128020768
  Exosomal proteins of colorectal cancer cells
   128020768
  Exosomal proteins of bladder cancer cells
   128020768
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 128020768
NCBI-ProteinID: XP_052463372
LinkDB
Position
A10
AA seq 381 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGN
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgcagatttttgtgaagacgctgactggcaagaccatcaccctcgaggttgagcccagc
gacaccattgagaatgtgaaagctaaaatccaagataaggaaggcattcctcctgaccaa
cagcgtctgatcttcgctggcaagcagctggaagatggacgcacactgtccgactacaac
atccagaaggaatccaccctccatcttgtcctgcgtctgagaggtggtatgcagattttc
gtcaagacacttactggcaagaccatcaccctcgaggtggaaccaagcgacaccattgag
aacgtgaaggccaagatccaggacaaggaaggcattcctcctgatcagcagcgtctgatc
tttgctggaaagcagctggaagatgggcgcacactgtctgactacaacatccagaaggag
tccaccctccacctggtgctccgtctgagaggtggtatgcagatctttgtgaagaccttg
actggtaaaaccatcaccctcgaggttgagcccagtgacaccattgagaatgtcaaagct
aaaatccaggacaaggaaggcattcctcctgatcagcagcgtctgatctttgctggaaag
cagctggaagatgggcgcacactgtctgactacaacatccagaaggagtccaccctccac
ttggtgctccgtctgagaggtggtatgcaaatctttgtgaagacgctgactggcaagacc
atcaccctcgaggttgagcccagcgacaccattgagaatgtcaaagctaaaatccaagac
aaggaaggcattcctcctgaccagcagcgtctgatttttgccggcaaacagctggaagat
gggcgcacactgtccgactacaacatccagaaggagtccaccctccacctggtgctccgt
ctgagaggtggtatgcagatctttgtgaagaccttgactggtaaaaccatcaccctcgag
gttgagcccagcgacaccattgagaacgtgaaggccaagatccaggacaaggaaggcatt
cctcctgaccagcagcgtctgatcttcgctggaaagcagctggaagatgggcgcacgctg
tccgactacaacatccagaaggaatctaccctccatctcgtcctgcgtcttcgtgggggc
aattaa

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