Carassius gibelio (silver crucian carp): 128020857
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Entry
128020857 CDS
T08819
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
128020857
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128020857
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
Pre-60S particles
Helicases
128020857
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
128020857
NCBI-ProteinID:
XP_052463574
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All DBs
Position
A10:3602153..3611820
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AA seq
552 aa
AA seq
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MEEGSVHFHEMGLDDRVLKALADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAY
AIPLIQRILTSKQTVREQAVRALVLVPTKELGQQVQSMIRQLTAFCSRDVRVADISGKAD
ISAQKPILMEKPDIVVGTPSRVQAHINAQNLQIQTSLEMLVIDEADLLFSFGFEADLKSL
LCHLPKIYQAFLMSATLNDDVQALKELVLHNPVMLKLQGSQLPDSSQLQQYSVRCEEEDK
FLLIYTLLKLGLVQGKSLVFVRDVDRCYRLKLFLEQFSIPACVLNSELPIHSRCHIISQF
NQGFYNYIIATDEQGLENPARRSQKTQEKGKKKKKGKDKEYGVSRGIDFHNVSNVINFDF
PASVESYIHRVGRTARADNPGSALSFISHTELEMLAEVENALTGDVTHDSVLKPYGFRME
EIEGFRYRCRDAMRSVTKQAVKEARLKEIKQELLNSEKLKTYFEDNPRDLQLLRHDKDLH
PAVIKPHLKNVPDYLIPTALKSLVNPLKRRKKKKIKTGGVMLSSFKKNIRGKNPLKSFRY
TRKKREKKAGKS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaggcagtgtacactttcatgagatgggtttagatgatcgagtattaaaggct
ctggctgatttaggctggtctcagcccaccctcatccaggagaaagccatcccgctggcg
ctcgaggggaaagatctgctggcccgagctcgaaccggatcagggaaaaccgcagcctac
gcgatccccctcatccaaagaatcctcacgtctaaacagactgtacgtgagcaggccgtc
agagctctagtcctggtcccgaccaaagaactgggtcagcaggtccagagcatgatccga
cagctcactgcgttctgcagcagagacgtgcgcgtggccgacatctccgggaaggcagat
atatcggcacagaagccgattttaatggagaagccagacattgtggtgggcacaccgtcc
cgagttcaagcccacatcaacgcccagaacctgcagattcagacttcattagagatgctg
gtcatcgacgaggctgatctactcttctcctttgggtttgaagcagaccttaaaagcctg
ctgtgtcacttacccaagatctaccaggcgttcctcatgtctgcgacgctgaacgacgac
gtccaggccctgaaggagctggttctccacaatcccgtcatgctgaagctccagggatct
cagctgcccgacagctctcagctccagcagtacagcgtccgatgtgaggaggaggacaag
ttcctgctcatctacaccctcctgaagctcggcctggttcaagggaagtcgctggtgttc
gtcagagatgtggaccgctgttaccggctcaagctgtttttggagcagttcagcatccct
gcgtgtgtcctgaactctgagctgcccattcactccagatgtcacattatcagtcagttt
aatcaaggcttctacaattacatcatcgccaccgacgaacagggcctggagaatcccgct
cgacgttcccagaaaacccaggagaaaggaaagaagaaaaagaaaggaaaagacaaggaa
tatggcgtttccagaggaatcgacttccacaacgtgtctaatgtgatcaactttgatttc
cccgcttcagtcgagtcctacatccaccgcgtcggcagaacggctcgtgcggacaacccg
ggctctgcgctgtccttcatatcccacacagagcttgaaatgctcgcagaggtcgaaaac
gctcttactggagacgtcacacatgacagtgttttgaagccgtacgggttcagaatggag
gaaatcgagggcttcagatacagatgtcgggatgccatgcgatcggtgacgaagcaggcg
gtgaaggaggccagactgaaggagatcaaacaggagctgctcaattcagagaaactcaag
acgtacttcgaagacaatcccagagacctgcagctgctgcgacacgataaagaccttcac
cccgccgtcatcaaacctcacctgaagaacgtgccggattacctgattccgacggcgctg
aagagtctcgtcaatcccctgaaacgacggaagaaaaagaagattaaaacaggcggcgtg
atgctgagcagctttaagaagaatatcagaggcaaaaatccactgaagagttttcgttac
acgaggaagaagcgtgaaaagaaggctggaaaatcctaa
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