Carassius gibelio (silver crucian carp): 128020875
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Entry
128020875 CDS
T08819
Name
(RefSeq) protein jagged-1a-like isoform X1
KO
K06052
jagged-1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04330
Notch signaling pathway
cgib04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128020875
04371 Apelin signaling pathway
128020875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cgib04090
]
128020875
CD molecules [BR:
cgib04090
]
Proteins
128020875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
DSL
EGF_DL_JAG
EGF_Teneurin
EGF_2
JAG1-like_EGF2
EGF_CA
EGF_3
Motif
Other DBs
NCBI-GeneID:
128020875
NCBI-ProteinID:
XP_052463601
LinkDB
All DBs
Position
A1:38524576..38549984
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AA seq
1247 aa
AA seq
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MRQTDRGGMILRRSPSFAVLSIHVLLRCLWMRVCEASGHFEMQVLSMQNLNGELQSGACC
DGARDDPDRSCTADECDTFFRLCLKEYQLRVSSGGPCSYGSGSTPVIGGNSFSVKPLDTP
NDKSRIVLPFSFAWPRSYTLIVEALDFNNDSSTGSVNGQVIEKAVQSGMINPNRQWHVLK
HNGLVAHFQYQIRVTCDEHYFGFGCNKFCRPRDDFFGHYNCDHNGNKTCLEGWAGPECNT
AICKQGCSTEHGSCKVPGDCRCLYGWQGEYCDQCIPHPGCVHGSCIEPWQCLCDTNWGGQ
LCDKDLNTCGTRQPCLNGGTCSNTGPDKYHCACPDGYSGQNCERADNACLSEPCLNGGSC
VESSQGFECQCAPGWTGPSCNINEDDCSPNPCNHSGVCLDLVDGFKCICPAQWTGKTCLI
DANECEESPCVNAHSCRNLIGGYFCECLSGWTGQNCDINVNDCHGQCLNGGLCKDLVNGY
RCVCAAGFAGEHCERDVDECASRPCLNGGRCQDALNRFQCLCPPGFSGDTCQLDIDYCES
GPCQNGAQCFSLASDYYCKCPEDYEGKNCSQLKDHCLITPCQVIDSCTVAVASNSTPGGM
RLISSNVCGPHGRCRSHAGGHFSCECQEGFTGTYCHENINDCESSPCRNGGTCIDKINAY
QCICADGWEGHNCESNIDDCSLNPCRDRGVCRDLVSDFYCECENGWKGKTCHSRESQCDE
ATCNNGGTCSDEGDSFKCTCAPGWGGATCNIAKNSSCLPNPCQNGATCVVTGDGFTCVCK
EGWEGLTCSQNSNDCNPQPCYNSGTCVDGDNWYRCECASGFAGPDCRINVNECQSSPCAF
GSTCVDEINGYRCLCPPGRTGPRCQEVSGRPCLAGGRIAVDGSKWAEDCNTCYCHRGIVS
CTKLWCGPKPCHMLGSGRGDCPLGQLCVPVRDEQCFVKPCSSQGECWSAHRPAVRAHCHP
ESDCANITFTFNKDTMPQGVTVEQVCRELRLYLYVAKNVSISMSCEISSVTNNEIHVAIH
ATEDGIHGRAPVKEITDSLIDLVSKHSVNSSIIGSIAEVRVQRRPALNSNVDYLVPLLVS
IVTAIWLLALASVFLWCVRHRRKHSSSPSAINPTTPYSTGNTDDNTVNNAREQLNHIKNH
IEKNASNASLPGKELHCDDKNSVNAKIRTHLSESARLAQEDSNKSLQKTCFPRQSTYMLV
DRDDRLSANATDLRDPRWTNKRDNRVLESQHRDLDAQHRLHKLEYIV
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgagacagacagacagaggaggcatgattctgagacggagtccaagtttcgcggtgctg
tccattcatgtacttttgcggtgcctgtggatgcgggtatgtgaggcatcggggcatttt
gagatgcaggttttgtccatgcagaacttgaacggagagctgcagagcggcgcgtgctgt
gacggtgctcgcgacgacccggatcgctcgtgcacggctgacgagtgcgacacgtttttc
cgcctgtgtttgaaggagtatcagttgcgggtgtcatcgggaggcccgtgcagctacgga
agcggatctactcccgttatcggtgggaatagtttttctgtcaagcccctcgacaccccg
aacgacaaatccaggatcgtgctgcccttcagcttcgcgtggccgaggtcatatacgttg
attgtggaggctttggacttcaataatgactcgagcactggcagcgttaatggacaagtc
atagagaaagcggtccagtcaggcatgatcaacccaaaccgtcagtggcacgtcttgaaa
cacaacggcctcgtggctcacttccagtaccagattcgggtgacctgcgacgagcactac
ttcggcttcggctgcaataagttctgtcggcccagagatgacttcttcggccactataac
tgcgatcacaacggcaacaagacctgcttggagggatgggctggcccagaatgcaacact
gccatctgtaagcagggctgtagcactgagcatggctcctgtaaagtgcctggagattgc
aggtgtctgtacggctggcagggcgagtactgtgaccagtgtatccctcatcccggctgt
gtgcacggatcatgcatcgaaccctggcagtgcctgtgtgacaccaactggggaggccag
ctctgtgacaaagacttgaacacctgtggcacacgccagccctgtctgaatggcggcacc
tgtagcaacacaggaccagacaaataccactgcgcctgtcctgatggctactcgggacag
aactgtgagagagcagataacgcctgtctgtctgagccgtgtctgaacggaggcagttgt
gtggagtccagtcagggcttcgagtgtcagtgtgcaccgggatggaccggaccgtcctgc
aacatcaatgaagacgactgcagtccgaacccgtgcaatcacagcggtgtgtgtttggat
ctggtggacggttttaaatgcatctgtcctgcgcagtggaccggcaagacctgtctcatt
gatgctaatgagtgcgaggagagcccgtgcgtcaatgcccactcctgccggaatctgatt
ggcggatacttttgcgagtgcctctctggttggacgggccagaattgcgacatcaatgtc
aatgattgccatggacagtgtcttaacggaggactgtgtaaggatctggtcaatggatat
cgatgtgtgtgcgcagcaggctttgcaggtgaacactgtgagcgggacgtggacgagtgc
gctagtcgcccctgtctcaacggaggacgctgtcaggacgcgctcaaccgattccagtgt
ctgtgtccacctggtttctcaggggacacgtgtcagctggacatagactactgtgagagc
ggcccgtgtcagaacggggcacagtgctttagcctggcctcagattactactgcaagtgt
cccgaagactacgaaggcaaaaactgctcccagcttaaagaccactgcctcatcacacca
tgtcaagtgattgacagctgcacggttgcggtggcgtctaacagcactccgggcggcatg
cggctcatctcctctaacgtctgtggtcctcacggccgctgtcgaagtcacgccggagga
cacttcagctgcgagtgtcaggagggattcaccggcacctactgccacgagaacatcaac
gactgtgaaagtagtccctgtcgtaacggcggtacttgcattgataaaatcaacgcgtac
cagtgtatctgtgctgatgggtgggagggacacaactgtgagagcaacattgacgactgc
agcttgaacccctgtcgggatcgaggagtgtgtcgggatctggtcagtgacttttactgc
gagtgtgaaaacggctggaagggaaagacctgtcactcacgcgagagccaatgcgacgag
gctacttgtaacaacgggggcacgtgttctgacgaaggcgactcatttaagtgcacgtgt
gctcctggatggggaggagcgacctgtaacatagcaaagaacagcagctgcctgccgaac
ccctgccagaacggagccacgtgtgtggtgaccggtgacggcttcacctgcgtctgcaaa
gaaggctgggaggggctcacctgcagccagaattccaatgattgcaacccacaaccatgc
tataacagcgggacgtgtgtggacggtgataactggtaccgctgtgagtgtgccagtgga
ttcgcagggccggactgtcgcatcaacgtcaatgagtgccagtcgtctccctgtgcgttc
ggttccacgtgtgtcgatgaaattaacggctaccgctgcctgtgtccccccggaagaacc
ggacccagatgtcaggaagtctctggacgtccgtgtttggccggaggtcggattgctgta
gatggatcgaagtgggctgaagactgtaacacctgttactgtcaccgagggattgtcagc
tgtaccaagctgtggtgtggccctaagccttgtcatatgcttggctcgggacgaggcgac
tgtcctctgggtcagctgtgtgtgccggtgcgagacgagcagtgtttcgtgaagccctgc
tcctcacagggtgagtgctggtctgctcaccggccggccgtgagggcccactgtcacccc
gagagcgactgcgccaacatcaccttcaccttcaacaaggacaccatgccacagggagtg
acggtggagcaggtgtgtcgtgagctgaggctgtatctgtatgtggctaagaatgtctcc
atctctatgagctgtgaaatctcttctgtcaccaataatgagatccatgtggccatccat
gcgactgaggatggcattcacggccgggctcctgttaaagagatcacagacagcctcatt
gatctggtgagcaagcacagcgtgaacagctccatcatcggctccatcgctgaggtccgt
gtgcagcgcagaccagcactgaactccaacgtagactacttggtgccactgctggtgtct
atagtgactgcgatctggcttttggccctggcgtctgtgttcctgtggtgcgtgcgccat
cgacgcaaacacagctccagccccagcgccatcaaccccaccaccccctactccacgggg
aacacagacgacaacacagtgaacaacgcccgcgagcagctcaaccacatcaagaaccac
atcgagaagaacgcgtccaacgccagcctgccaggaaaagagctccactgcgacgacaag
aacagcgtcaacgccaaaatcaggacgcatttgtccgaatcagccagactagcgcaggag
gactccaacaagagtctgcagaagacatgctttccacgccagtcgacttacatgctggtg
gacagagacgacaggctgagcgccaacgccacggacctaagagatccacgctggactaat
aaacgagacaacagggtcctggagtcacagcacagagatctggacgcacaacaccgcttg
cacaaactggagtatatcgtatag
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