Carassius gibelio (silver crucian carp): 128020880
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Entry
128020880 CDS
T08819
Name
(RefSeq) serine/arginine-rich splicing factor 9-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128020880
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128020880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
128020880
Spliceosome [BR:
cgib03041
]
Common components
Common spliceosomal components
SR proteins
128020880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
128020880
NCBI-ProteinID:
XP_052463607
LinkDB
All DBs
Position
A10:4276475..4281910
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AA seq
248 aa
AA seq
DB search
MSDGRIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVF
GRNGYGFGDNKLRVEYPRSSGSKFSGPAGGGGGGGGGGPRGRFGPPSRRSEFRVIVTGLP
PTGSWQDLKDHMREAGDVCFADVQRDGEGVVEFLRREDMEYALRRLDSTEFRSHQGETSY
IRVMEERGTSWGRSRSRSRSRGRYSPPYQSRGSPPPRYRSPPRHMTRHSPPSRRAPLQHH
SPPPRHYR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacggacggatctacgtgggaaaccttcccatggacgtccaggagagggacatt
gaggatctcttcttcaaatatggaaaaattcgggatattgagctgaagaacaacagaggc
accatcccgtttgccttcgtgcggtttgaggatccacgggatgcggaggacgccgtcttt
ggaaggaatggatatgggtttggagacaataagctgcgtgtggaatatccacgatcttcc
ggatccaaatttagtggacctgcgggaggaggaggcggaggaggaggaggaggaccgcgg
ggacggtttggacctccgtcacgcagatctgagtttcgcgttattgtgacggggcttcct
ccaaccggcagctggcaggatctgaaagaccacatgcgtgaagccggagacgtgtgtttc
gcagatgtgcagcgtgatggcgaaggtgtggtcgagttcctcagacgagaggacatggag
tacgctctgagacgcctggacagcacagagttcagatcccatcagggagagacgtcctac
atcagagtgatggaggagcgcggcacaagctggggtcgctcacgctcccgctccaggtct
cgaggacgatactcgcccccgtaccagagcagagggtcaccgccgccccgttaccgatcg
cccccgcgtcacatgacccgtcatagccctccgtcccgccgagcgccgctgcagcatcac
agccctccgccgcgacactatcgatga
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