Carassius gibelio (silver crucian carp): 128020998
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Entry
128020998 CDS
T08819
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128020998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128020998
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128020998
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
HECT type E3
128020998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
128020998
NCBI-ProteinID:
XP_052463815
LinkDB
All DBs
Position
A1:complement(38751607..38772909)
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AA seq
1047 aa
AA seq
DB search
MMLCWGSSGSGQLGIGASEASVFEPRSCCMFDGRGLKEVACGSQHSLFLLHDGSVYASGS
NSFGQLGHDKGGWRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGEGGQLGLGA
AEEVVRVPRLIKKLCEHRISQVMCGNQHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLS
PQPLKSLSGIPLALISAGGDHSFALSLSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLR
SQKVVYISCGEEHTAALTKDGGLFTFGNGSRGQLGHDSTRNEPLPRRVMELMGTEVSQIA
CGRHHTLAFVPSTGLVYAFGSNTQGQLGTGLRGNAKSPLPVRNIQPLCIGYTHTKAECYT
VGKIHSGGDHSFLLLSTTKAGSSCPEDFRIMNTTKSIAVINSESLDSWRMKLHDNSDSSI
TNDIILLFSSTACWNASFLDQSDDGHFKTNPKVPGIDFNAVRLLFETLMKPAFARLLEQA
TKSFESLLIPQLPCSPPDVEAMRIYLILSECPALHDSKNYISLTIPLAMAILRLDANPSK
VLDNWWSLMDCEVFSRLVEMYKSIVVFLLTGGKALLMPVFLESYTSAALRLLEKLHKVNL
KAQRVEYNHFYIPDISRLVDIQEDYLKWFLRKADIKMRCPPVQGSVTLCAYPFILNAQAK
TTVLQTDAELQMQMAVSGANLHNVFMLLTMEPLLARNPFLVLHVRRNLLVSDALRELTVY
SDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPIYGMFTQYSESNLLWFSDKCF
VEHNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLNVSPTLDDLKELSPTEGRSLQQLL
EYEGDVEETFCLNFAITREYYGITEVKELVQGGKTIAVDKTNRKEFVHAYLQYVFSDSVQ
EQYLAFSSGFLKVCGGEILSLFQPSELMAMVVGNSNYNWEEMEKNASYKGEFSASHPTVK
MFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMASLRIVIQSTAAEEHYLPVAHTCYNLLD
MPCYQTKETLRHRLTQAVEQYEGFSLV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgctggggaagcagtggctcgggtcagctgggcatcggtgcctcggaggcg
tctgtctttgagccgaggagctgttgcatgttcgacgggaggggtcttaaagaagttgcc
tgcggcagccaacactcgctcttcctgttgcatgatgggagcgtttacgcctctggctcc
aacagctttggtcagctgggccatgacaagggaggatggaggccagagctggttggagca
ctggatgctcagaagatctccggtgtgtcgtgtgggcaagctcactctctggcggtgaac
gagcaggggcaggtgtttgcctggggggctggagaaggagggcagctcggtctgggtgca
gctgaagaggtggtccgtgtgcccaggttgattaaaaaattgtgcgagcatcgaatctca
caagtaatgtgtggaaaccaacactgcatagcactttccaaagatggtcagttgtttgta
tggggagagaactccagcggtcagctgggtttagggaagggagagcccagcactctgtct
cctcaaccgctcaaatctctgagcgggatccctctggctctgatcagcgctggaggagac
cacagcttcgccctgtcactctctggagccgtgttcggctgggggaagaacagcgccggg
cagctgggcctcaatgacgagcaagatcgggctgttccctgtcacatcaagttcctgcgc
tcacagaaggtggtgtacatcagctgtggagaggagcacaccgctgccttgacaaaggac
gggggtctgttcacatttggaaatggttcaagaggacagctgggccacgattccaccaga
aacgagcctcttccacgcagagtcatggagctcatgggcactgaggtgtctcagatcgct
tgtgggcggcaccacaccctggcattcgtgccctccactggtctggtttacgctttcggc
tccaacactcagggccagctgggtacaggcctcagaggaaatgctaagagcccacttcct
gtcagaaacatccagcccctgtgcattggatatacacatacaaaagccgagtgctacacc
gttggtaaaattcacagtggaggcgaccacagtttcctgttgttgtcgactacaaaggcg
ggttcatcttgtccagaggattttcgcattatgaataccaccaaaagcatcgctgtgatt
aattctgagagtctggacagctggaggatgaagctccatgacaacagcgattcaagcatc
accaatgacatcatactcctgttttcctcaactgcatgttggaacgccagctttttagac
caaagtgatgacgggcatttcaaaaccaaccccaaagtcccaggcatcgatttcaatgct
gttaggctgctttttgagacgctgatgaaaccggccttcgcaagacttttggagcaggcc
accaagagctttgagagtctcctgatcccccagctgccctgctctcctcctgacgtggaa
gccatgcggatctacctgatcctgtctgaatgtcccgctctccacgactccaaaaactac
atctctctcaccatccctctagccatggccatcctcagactggacgccaaccccagcaaa
gtcctcgataactggtggtctctgatggattgcgaggtcttctccagactcgtggagatg
tacaaaagcattgtggtgtttctgttgactggcgggaaggcgctcctgatgcctgtgttt
ctggagagctacaccagtgctgccctgcgactgctggagaaacttcacaaggtcaatctg
aaagcccaacgcgtggaatacaaccacttctacatccctgatatctccaggctggtggac
atccaagaagactacctcaaatggtttctacgcaaagctgatattaaaatgcgatgccct
ccagtgcagggttctgtcacgttatgtgcctatccgttcatattgaacgcgcaagccaag
acaaccgtgctgcaaacagatgccgagctgcaaatgcagatggcagtaagcggcgctaac
ttgcacaacgtcttcatgctgttgactatggaacctttgctggcaagaaaccctttcctg
gtgctccacgtacgaaggaacctcttagtcagcgatgctctccgggaactcacagtctac
agtgatgtagacttgaagaagccacttaaggtgatctttgatggagaggaagctgtggat
gctggaggagtcactaaggagttcttcctgctcctgctgaaggagttgatggaccctatc
tatggcatgttcacccaatattcagagtccaatctgctgtggttctctgacaaatgtttt
gtggagcacaattggttccacttgattgggataatttgtggcttggccatctataactcc
actgtggtggacttgcactttcccctggtgctctacaagaagcttctgaacgtttcgcct
acactggatgacctgaaagagctttcgcctacagagggaaggagtcttcagcagctgttg
gagtatgagggcgatgtggaggagaccttctgtctgaactttgcaattacgagagagtat
tatgggatcacagaagttaaagagctggtacaaggagggaagaccatcgccgtggacaag
acgaacaggaaggagtttgttcatgcgtatctgcagtatgtgttcagcgactctgtgcag
gagcagtatttggccttctccagcggtttcctgaaggtctgtggtggggagatcctctct
ctcttccagccctctgagctcatggccatggtggtgggcaacagcaactacaactgggag
gagatggagaagaatgcatcctacaagggcgagttctctgcatcccacccaacagttaag
atgttttgggaggtgtttcatgaatttcccttggagaaaaagaaacagtttttattattt
ttgacaggcagtgaccgtatccccatccacggcatggccagtctacgcatcgtcatccag
tcgactgctgcggaagagcattaccttcctgtggcccacacctgctataacctgttggac
atgccctgctaccagaccaaagagaccctgcggcaccggctcacgcaagccgtggagcag
tacgagggcttcagtctggtctga
DBGET
integrated database retrieval system
