Carassius gibelio (silver crucian carp): 128021002
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Entry
128021002 CDS
T08819
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128021002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
128021002
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
128021002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
128021002
NCBI-ProteinID:
XP_052463817
LinkDB
All DBs
Position
A10:7501180..7527248
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AA seq
2751 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPVTTTKSLLYNGRIAEEVSCLLSRRDDT
LVSQLAHSLNQVSTEHIELKDNLGSDDPEGDVPLLLQTVLSRNPNLFREKSTPTRYGVQG
GLMQQPMLSPYKMPQNSMHGSPASNYQQTTITPSPPSRYVQPPAGSGTRYMPQQNSPVPS
PYAPQSPAGYMQFSHPPSYPQHQQIQQVSVSSPIVPGGMRNIHDNKVSCQVSGNSNHNAR
HCSNDEYISIVQRLGNDESDPAMRNASFPVRSICSPAGSEGTPKVGSRPPLILQSPPPYT
SPRDAASDLLLDSPERKKKQKKLMKEEGGKGAMYDIVSSPTKDSTRLTIKLSRVKSSETE
QSAEPLSVVEHGSEAENELSCNTSPYHRNPQERLSAGHCLSGEQSAYQQVPVLQNTGALA
AKQPGVVSGTPYDEAELDALAEIERIERESAIERERCSKEVQDKDKPLKKRKQDSYPQEP
GAAGTAGSSGTPGVGGGCNAGNKLVPQEACAASNGASRPALMVSIDLQQAGRVEGPMDSC
PVPATEAQRWPEDGSETTGVLRLKSKTDGEVQRKVDGRPEVIKQLLETTPQKTTSDGRSE
TPKHKHENRHEISNKGSSEKRLNLSKHRHDGMSDKVRPEGKGHETSRKQEGRLESTLESK
EERQKDWDSEDPKVRRPDTSKSNQVEHNREVDRNQEREKEGENWDKEREKDRDKVRNKDQ
EKVRDMVREKDRDMVREKDRDMVREKDRDKVREKDRDRVREKDRDKVREKDQDKVREKDR
DKERVKNRVKERVKDRDKERERVRDKDRDRDTEKDQEKERERVRDKDRNRDRDQEKKRHT
ESTESRDKPSPEQRSNPNSPRLKQEPRSGAESKKKQERSVHKTSNSKDERRSGDKNRLDG
HKPPSLDSKTAEFPNYLLGGKSSALKNFVIPKLKRDKDGNVMQEMRRELFSEPLVKLEKL
DLVEDLNKGVKPVVVLKKLSIDEVKKLISSSRSKSSKKMDSRMPLCERVKMNKRRRSSTN
EKPKYAEASSDDDSSSVELPPKRSKKDRDKTWEYEEKDRRGSGDHRRSGGHYDSRRSSGS
RHREQSPVDSDEDSPPPSLSDLARKLKKKEKQKKRKSYEPKLTEDEMMDSSTFKRFSTSV
DNILENLEDVDLTSLDDDEIPQELLLGKHQLSELSSETAKIKAMGIMHKIPSDKMVKVQS
ILEKNIQDGAKLSTLMNHDSDRDEEERLWRDLIMERVTKSADACLTALNIMTSARMPKAV
YIEDVIERVVQYTKFHLQNTLYPQYDPVYRVNPHGGGTLSSKAKRAKCSTHKQKVTVMLY
NKVCDIISNLSELLEIQLLTDTTILQISSLGITPFFVENVSELQLCAIKLVTAIFSRYEK
HRQLILEEIFTSLARLPTSKRNLRNFRLNSSDMDGEPMYIQMVTALVLQLIQCVVHLPSD
KYSDDYNDRKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEDDYRPLFENFVQDLL
STVNKPDWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLRKDAVTSTMD
QRSINRILGENSGGDEVQQLQKALLGYLDENVETDPSLLFARKFYIAQWFRDTSTETEKA
MKSHSQRDDDSSDGPHHARDVETTGEILQKAEARKKFLRSVIKTSASKFSSLRVNSDAVD
YEDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVVAVDPSILAR
SDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDMLIERILDTGISVRKRVI
KILRDICLEQPTFNKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPNHDKQAMTRK
ILNITDVVAACKDSGYDWFEQLLQNLLKSEEDASYKPARKACAQLVDSLVEHILKYEESL
ADCENKGLMSSCLVACITTLYLFSKIRPQLMVKHAMTIQPYLTTKCNTSSDFMVICNVAK
ILELVIPLMDHPSENFLTTIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTHNFKFVWSC
FNRYYGALNKLKLQHQEDPNSTVLVSNKPALLRSLFTVGALCRHFDFDQEEFKGSNKVVI
KDKVLELLLYFTKNEDEEVQTKAIIGLGFLFIQHPGLMFASDVKNLYNCLLADRKTSVNL
KIQVLKNLQMYLQEEDSRMQEADREWKKMSKQEDLKEMGDISSGMSSSIMQLYLKQVLES
FFHTQSSVRHFALNVIVLTLSQGLIHPVQCVPYLIAMGTDSEPTMRNKSDQQLVEIDKKY
TGFIHMKAVAGMKMSYQVQQAIVDSKDMIIRGFRQDETNTALCAHLYTMVRGNRQHRRAF
LISLLNLFDDNAKSDVNLLLYVADNLACFPYQSQEEPLFIMHHVDITLSVSGSNLLQSFK
ESLLKEPRPREKKKKRGKKYGSEEEDESSRGSSSDSDSSDEVIRRPKKSRRSAAVNSDSD
SDLDLEDVDKVMLRLPDNPEPLLDFANASQGILLLLMLKQHLKNLYGFSDSKILKYSPTE
SAKVYDKAVNRKANVHFNPRQTLDYLTNSLSNADLTYDVKRRVVRQYLDFKVLMEHLDPD
EEDEEGEASANSHARNKAITALLGGSSSSPKNNAAESYDDDSDADEKAPGSSRRSRKGGD
SAEASGHMNETVEAMDVIAICCPKYKDRPQIARVIQKTSKGYSIRWMAGSYSGTWAEAKK
RDGRKLVPWVDTIKESDIIYKKIALTSAHKLTNKVVQTLRSLYAAKEGTSS
NT seq
8256 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcctatcaccactctcgctgggatcgcaagcctcact
gacctgttaaatcagctgcctctcccttcccctctacctgtcactaccactaagagcctg
ctgtataatgggaggatcgccgaggaggtcagctgtctgctgtcccggcgggacgacacg
cttgtgtctcagctggcgcacagcctcaaccaggtgtccactgagcacatagagctgaag
gacaacttgggcagtgatgacccagaaggagatgtgcctctactgctgcagacggtgcta
tcaaggaatcccaatctcttcagggagaaaagtacgcccacccgatatggggttcagggc
ggtttaatgcaacagccaatgttatcaccatacaagatgcctcagaattcaatgcatgga
agtccggcatcaaactaccagcaaaccactataactccaagccctcccagccgatatgtt
caacctccggcaggttctggaaccaggtacatgccacagcagaacagcccagtgcccagc
ccgtatgcgccacagagccctgcaggctacatgcagttcagccatccacccagctaccct
cagcaccaacagatccagcaagtatctgtatccagtccaatagttcctggtggcatgaga
aacatccatgacaacaaggtctcctgtcaagtgtctggtaactccaaccataatgcaagg
cattgctccaacgatgagtacatcagcattgtccagagacttggaaatgatgagagtgac
cccgctatgagaaacgcctccttccctgtacgctccatatgctctcctgctggaagtgaa
gggacgccgaaagttggatctcggccgcccctgattcttcagtctcctccaccctacacc
tccccaagagatgctgcttctgacctcctcttggactcacctgaacggaaaaagaaacag
aaaaagttaatgaaggaggaggggggtaaaggtgccatgtatgacattgtcagctcaccc
actaaagactccacaaggctaacaataaagttgtctcgagtgaagtcttctgagactgag
cagtcagctgagccattatcggtggtagagcatggctcagaggctgagaatgaactatcg
tgcaatacctcaccatatcaccggaacccccaggaacggctctccgcaggtcattgtcta
tcgggtgagcagtcggcctaccaacaggttcctgtactacagaacactggggcacttgca
gccaagcaacccggggtagtaagtggaaccccctacgacgaggcagagctggatgctctt
gctgagatcgaaaggattgagagggaatccgctattgaacgagaacgctgctctaaggaa
gttcaagataaagacaaacccctaaagaagagaaagcaggattcgtatcctcaggaacca
ggagctgcaggcaccgctggctcttctggaacacctggcgtgggtggtggatgcaatgct
gggaacaaattggtacctcaagaggcttgtgccgctagtaatggagccagtcgtccggcc
ttgatggtcagtatagacctgcaacaggcaggcagggtggaagggccaatggactcctgt
cctgtccctgcaacagaggcccagcgctggcctgaagatggttctgaaaccaccggggtc
ttgcggctcaaatcaaagacagatggagaggtgcagaggaaggtagatggacgtccagaa
gtcatcaagcaactgttggaaactacaccacagaaaaccacttctgatgggcgatcagag
actcccaaacacaagcatgagaaccgccatgagatctccaacaaagggagttcagaaaaa
agattgaatctttccaagcacagacatgatggtatgtctgacaaagtaaggcctgaggga
aaaggtcatgaaacttccagaaaacaggaaggacgtttggagtcaactctagagagcaaa
gaggagaggcaaaaagattgggacagtgaagatcccaaagtccgacgaccagatacgtct
aagtccaaccaggtagagcacaaccgggaggtagatcggaaccaggagcgggaaaaggaa
ggggaaaattgggacaaagagcgagagaaagatcgagacaaggtgcggaataaggatcag
gagaaagttcgggacatggtgcgggaaaaagatcgggacatggtgcgggaaaaagatcgg
gacatggtgcgggaaaaagatcgggacaaggtgcgggagaaagaccgggacagggtgcgg
gagaaagaccgggacaaggtgcgagagaaagatcaagacaaggtgcgggagaaagataga
gataaagagcgggttaaaaatcgggtcaaggagcgggtaaaagatcgggacaaggaacgg
gagagggtccgggataaagatcgggacagggatacagagaaagatcaggaaaaggaacgg
gagagggtccgggataaagatcggaacagggatcgagaccaagaaaagaaacgccataca
gaatcaacagagtcccgtgacaagccatctcctgagcagcgctccaatcctaacagtcct
cggttgaagcaggaacctcgtagtggagcagaatcaaaaaaaaaacaggaacggtcagtc
cacaaaacttccaacagcaaagacgagaggcggagtggagacaagaaccgacttgatgga
cacaagccaccatccttggacagtaaaacggcagaatttcccaactacctactggggggc
aaatcgagtgcattaaaaaactttgtcatccccaagttgaaacgagacaaagatggtaac
gtcatgcaggaaatgcgacgagaactgttttcagagccacttgtgaaattagaaaaactg
gacctggtggaggacctcaataagggcgtaaaacctgttgttgttctgaagaaactttcc
attgatgaggtcaagaagttgatcagtagttcgcggagcaagtcaagcaagaagatggat
tcccgtatgccactgtgtgagagggtgaaaatgaataaacgcagacgcagctccactaat
gagaagcccaagtatgctgaagccagctcagatgatgatagtagttctgtagaactgccc
ccgaagcgttcgaaaaaggatcgagacaaaacatgggaatatgaagaaaaggaccggagg
ggttctggagatcatcgacgaagtggaggtcactacgacagccggagaagttcaggcagt
cgacacagagaacaaagtcctgtggactctgatgaagattcaccccctcccagtctgagt
gatctcgccagaaagttgaagaagaaggaaaagcagaaaaagaggaaatcctacgagccc
aaactgactgaggatgaaatgatggactcctccacgttcaagagattttccaccagtgtt
gacaacattcttgaaaaccttgaagatgtggacttgacatcattagatgatgatgagatt
cctcaggagctgctcctcggaaaacaccagctctctgagttaagcagtgaaacagcaaaa
ataaaggctatgggcatcatgcataagattccatctgataagatggtgaaggtccagagt
attttggaaaaaaacattcaagatggtgcgaagctctccaccctcatgaatcatgacagt
gacagggacgaagaggagcgtttgtggcgtgacctcatcatggaacgtgtcaccaaatct
gctgatgcttgtctgacggctcttaacatcatgacctcagcacgaatgccgaaggccgtt
tacattgaggatgttatcgagagggttgtgcagtacaccaagttccatctacagaacaca
ctgtacccgcagtacgaccccgtctacagggtgaaccctcatggcggtggaacactaagc
tcaaaagccaagcgagcaaagtgctcaacgcacaagcagaaagttactgtcatgctctac
aacaaagtttgtgatattatcagtaacctgtctgaactgttggagattcagctgttgact
gacacaaccatccttcagatctcgtctctaggtatcactccattctttgttgagaatgtg
agtgagctgcagctttgtgcaattaaactagtgacggctattttctctagatatgagaaa
cacaggcagctgatcctggaggagatcttcacctctcttgccagactgccaaccagcaag
agaaacttaagaaatttcagactgaacagcagtgacatggatggggagcccatgtacatt
cagatggtgaccgcgctggttctgcagcttattcagtgtgtggtccatctaccttctgat
aaatactcagatgattataatgacagaaaggttgatcaggatgtattaatcacaaactcg
tacgagactgcaatgagaacagcacaaaacttcctctccgttttcctcaaaaagtgtggt
agcaagcaaggtgaggatgactacaggccactgtttgagaactttgttcaggatctactg
tccaccgtcaataaacctgattggccagctgcagaactgctgctgagccttctgggaagg
ctgctggttcaccagttcagtaataagcaaacagagatggctttgagagtggcctctttg
gattatctgggcacagtggctgcacggcttcgcaaagatgctgtcaccagcacaatggac
cagcgttcaattaaccgcatcctcggagagaactcaggcggtgatgaggttcagcagctg
cagaaggctttgctgggttacctggacgagaacgtagagactgacccgtcgctcttgttt
gcacggaagttctacatcgcgcagtggttcagggacaccagcactgagacagagaaagcc
atgaaatcgcatagtcagagggacgacgactcgtccgatgggccgcaccatgccagggat
gtcgagaccactggtgagatcttacagaaagctgaagcgcgcaagaagttcctccggtct
gttatcaagacctcagcatcaaaattcagctctctgagagtaaactcagatgctgttgac
tatgaggactcgtgtcttattgtgcgatatctggcctccatgaggccgtttgcacagagc
tttgatatttatctcacacagattttgagagttctcggtgaaagtgccatcgcggtgaga
actaaagccatgaaatgtctttctgaagtggttgcggtggatccaagcattctggctcgg
tcggacatgcagcggggagttcatggccgactgatggacaactccaccagcgtgagagaa
gctgcggtagagctgctggggcgcttcgtactgagtcgaccacagctaactgaacagtat
tacgacatgctgatcgagcgcatcctggacacaggcatcagtgtgaggaagagggttatt
aaaatcctacgggacatctgtctggagcagcccaccttcaacaagatcacagagatgtgt
gtaaagatgatcaggagggtcaatgacgaagaaggaatcaagaaattggtaaatgagaca
tttcagaagctgtggttcacccctacacctaatcatgataaacaggccatgactcgcaag
attctcaacatcacagacgtggtcgctgcatgcaaggattctggttacgactggtttgag
cagctccttcagaatctgttaaagtcagaagaggatgcctcgtacaaaccggccaggaag
gcttgtgctcagctggtggacagtctcgtggagcatattctgaaatacgaggagtctctc
gctgactgtgagaataaggggttgatgtccagttgcctagtggcttgtattaccacgctg
tacctgtttagtaagatccgaccccagctgatggtgaaacatgccatgactatccagccg
tatctaactacaaagtgtaatacctcgagtgattttatggtgatctgtaatgtggctaaa
atcctggagcttgttattcctttgatggaccatccgagtgaaaatttcctcaccaccatc
gaagaagacctgatgaaactcatcatcaaatacggcatgacggttgtgcagcactgcgtg
agttgtctcggtgcggtcgtcaataaggtcacccataacttcaagtttgtgtggtcttgt
ttcaaccgatactacggagcactaaacaagctgaagttgcagcatcaggaagacccaaac
agcaccgtactggtgtctaataaacctgctctgctgcgttcactcttcactgtgggtgcc
ctgtgccgacacttcgactttgaccaagaggagttcaaaggcagtaataaggtggtcata
aaagacaaagtgctggagctgctattgtatttcactaaaaatgaggatgaagaggtgcag
accaaggccatcattggtctaggcttcctgttcatccagcacccagggctaatgtttgct
tcagatgtgaaaaacctctacaactgcctcctggctgacaggaaaacgtcagtgaatctg
aagatccaggtgctaaagaacctgcagatgtacctgcaggaggaagactcgcgcatgcag
gaagccgacagggagtggaagaagatgtctaagcaggaggacctgaaggagatgggtgac
atctcatctggcatgagcagttctatcatgcagctctacctcaagcaggtgctggagagc
tttttccacacgcaatccagcgtacggcactttgccctcaatgtaatcgtcctgacactc
agccaaggcctcattcatcctgtacagtgtgttccgtatcttattgcaatgggaaccgac
tcggaacccacaatgaggaataaatctgatcaacagctggtggagatcgataagaaatac
acaggattcattcacatgaaggctgtggcggggatgaagatgtcctatcaggtgcagcaa
gccattgtggattcaaaggacatgataatcagaggtttccgacaggatgagacaaacaca
gctctttgcgctcacctctacaccatggtgcgtggaaacaggcaacaccgcagggctttc
ctcatctccctgctcaacctgtttgatgacaacgcgaagtcagacgtgaacttgctgttg
tatgtcgcagacaatctggcctgcttcccatatcagagtcaggaagagccgctgttcatt
atgcaccatgtagacatcacactatcagtgtccggcagtaacctgctgcagtcattcaaa
gagtctttgctaaaggaacctagaccacgggaaaagaagaaaaaaagagggaaaaaatat
ggctctgaggaagaggatgaaagtagcagaggaagcagcagtgatagtgatagtagtgat
gaagtcatccgtcggccaaagaaatccagacgatccgctgcagtgaactctgactccgat
tcagacctggacttggaggacgttgacaaggtcatgctgcgtctacctgacaaccccgag
cccttattggactttgctaatgcctctcagggcatcttgctgctcctgatgctcaagcag
caccttaagaacctctatggcttctctgacagtaaaattctgaaatactcacctacagaa
tcggcaaaggtttatgataaggctgtaaacaggaaggccaatgtgcatttcaacccacgg
cagacactagactacctgacaaacagcctgtccaatgcagatcttacttacgatgtcaag
aggagagtcgtcagacagtatttagattttaaggtactgatggagcacttggacccagat
gaggaagatgaggaaggagaggcttcggccaattcccacgccagaaataaagccatcact
gctctactaggaggctccagctccagccccaagaacaatgctgcggagtcgtacgatgac
gacagcgatgcggacgaaaaggctcctgggtcatcacggagatccaggaaaggcggagat
tcggcagaggcatcaggtcacatgaacgaaacggtggaagccatggacgtcatcgctatc
tgctgccccaaatataaggaccggccgcagatagcgcgtgttattcagaagacaagcaaa
ggatacagcatacgctggatggccggatcatactccggcacctgggcggaggccaagaaa
cgcgacggacgtaaactggtgccttgggtggacactattaaggagtcggacattatttac
aagaaaattgccttgacaagtgcgcacaaactgaccaacaaagtagtgcagactttacgt
tcactatacgcagccaaggaaggaacttccagctaa
DBGET
integrated database retrieval system
