Carassius gibelio (silver crucian carp): 128021053
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Entry
128021053 CDS
T08819
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128021053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128021053
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128021053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128021053
NCBI-ProteinID:
XP_052463897
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All DBs
Position
A10:complement(8185040..8187641)
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AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHRSFLKENCRPDGRELGEFRPTTLNISSISTADGSALVKIGNTTVIC
GIKAELTMPPSDAPNKGYIVPNVDLPPLCSSRFRPGPPGEQAQSASQFIADVIESSDLIN
LEELCIEKSKLCWVLYCDIMCLDYDGNLLDACIIALLAALRNAQLPEATINKETDLAEVD
IQKKRHLKINRHPVGSSFAVFDDSIIIVDPTAEEESLSTALLTVVTDEEDRLCAVHKPGG
TSLSGEKLQHCINRAITRNKEISKLVDKVFESMKTAK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggtttcaaaaccgcagagcctctagaatatcacaggagctttctgaaagaa
aactgtcggccagatggaagggaattgggagagttcagacccacaaccttaaatattagc
tctatatctacagctgatggatcagcattggtaaaaattggaaacaccacagtgatctgt
gggatcaaagctgaattgactatgccaccatctgatgctccaaataaaggatatatagtc
ccaaatgtagatctgcctccactgtgctcatctagattcagacccggtccaccaggagaa
caggctcagagtgccagccagtttatcgcagatgtcattgaaagttcagatttaataaat
ttggaggaattgtgcattgaaaaatctaagctttgttgggtgctgtactgtgatattatg
tgtttggattacgacgggaacttacttgacgcctgtatcatagctctgctggcagcttta
aggaacgcccaactccctgaagccactataaacaaggagacagatttagcagaagttgac
atccagaagaagaggcacttgaagatcaaccggcatccagttggctcatcatttgcagta
tttgacgactctataatcatagtcgaccccacagcggaagaagaaagcctgtcaacagca
ttactgaccgtggtaacagacgaggaggatcgactctgtgccgtccacaaaccaggtggg
acgtcgttatctggtgagaaactgcaacactgcataaatcgggccataacgagaaacaaa
gaaatcagcaaactggtggacaaagtctttgagagcatgaagacggcgaaataa
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