KEGG   Carassius gibelio (silver crucian carp): 128021062
Entry
128021062         CDS       T08819                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03030  DNA replication
cgib03410  Base excision repair
cgib03420  Nucleotide excision repair
cgib03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    128021062
   03410 Base excision repair
    128021062
   03420 Nucleotide excision repair
    128021062
   03430 Mismatch repair
    128021062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgib03032]
    128021062
   03036 Chromosome and associated proteins [BR:cgib03036]
    128021062
   03400 DNA repair and recombination proteins [BR:cgib03400]
    128021062
DNA replication proteins [BR:cgib03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    128021062
  DNA Replication Termination Factors
   ELG1-RFC complex
    128021062
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    128021062
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     128021062
  Check point factors
   HRAD17(Rad24)-RFC complex
    128021062
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 T2SSE AAA_11 DUF2247 AAA_30 ABC_tran T4SS-DNA_transf AAA_2 AAA_5
Other DBs
NCBI-GeneID: 128021062
NCBI-ProteinID: XP_052463919
LinkDB
Position
A10:8458680..8461330
AA seq 356 aa
MSLWVDKYRPTSLAKLDYHKEQANQLKNLVQCGDFPHLLVYGPTGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITTPSKKKLEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQ
IQSSAQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIGPIRSRCL
AVRVPLPSVEELCSVLSGVCRKEGLLLPPELARLIADKSGRNLRKALLMCEACRVQQYPF
SPDQDIPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPEVIMKGLVTELL
SNCDGHLKAEVAQMAAYYEHRLQLGSKAVYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttatgggtggataaatacagaccaacgtcattggctaaactcgactaccacaag
gagcaagcaaaccagctcaaaaatctggtccagtgtggtgattttccacatttgttggtt
tatggaccgactggtgctggtaagaaaacccggatcatgtgtttgctcagagagctgtac
ggagccggtgtcgagaaacttcggattgaacaccagtccatcacgactccatctaaaaag
aagcttgaaatcaacacaattgccagcaactaccatctagaggtgaatccaagtgatgct
gggaacagtgaccgtgtggtcattcaggaactgatcaaaactgttgcccagtctcagcag
attcagtccagtgctcaaagggagttcaaagtggtgctgctgacagaggtggaccgtctc
actaaagatgcccagcatgccttgcgccgtacgatggagaagtacatgtctacttgtcga
ttgatcctgtgctgtaactccacctcaaaagtgattggccccatcaggagcaggtgtctg
gctgtgagagtccccctaccaagtgtggaagagctgtgcagtgttctgtcaggtgtgtgc
aggaaggagggactgctgcttcctcctgaactggccagactgatcgctgacaaatctggc
cgtaaccttcgtaaagccctgctgatgtgtgaggcctgcagagttcaacagtatccattc
tccccagaccaggacatccccgagacagactgggaggtttacctcagagagaccgctaat
gctatagtcagccagcagagccctcaaagacttttggaggtccgggcacgattgtatgaa
cttctgactcactgtattccgccagaagttatcatgaagggcctggtgacagagttgcta
agtaactgtgatggacacttgaaggctgaggtggctcagatggcggcatactacgaacac
agactgcagctgggcagcaaagcagtctaccacctggaggcttttgtagctaaattcatg
gccatctacaagaagtttatggaagatggacttgacaactttatgttttga

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