Carassius gibelio (silver crucian carp): 128021062
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Entry
128021062 CDS
T08819
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03030
DNA replication
cgib03410
Base excision repair
cgib03420
Nucleotide excision repair
cgib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128021062
03410 Base excision repair
128021062
03420 Nucleotide excision repair
128021062
03430 Mismatch repair
128021062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgib03032
]
128021062
03036 Chromosome and associated proteins [BR:
cgib03036
]
128021062
03400 DNA repair and recombination proteins [BR:
cgib03400
]
128021062
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128021062
DNA Replication Termination Factors
ELG1-RFC complex
128021062
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128021062
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128021062
Check point factors
HRAD17(Rad24)-RFC complex
128021062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
T2SSE
AAA_11
DUF2247
AAA_30
ABC_tran
T4SS-DNA_transf
AAA_2
AAA_5
Motif
Other DBs
NCBI-GeneID:
128021062
NCBI-ProteinID:
XP_052463919
LinkDB
All DBs
Position
A10:8458680..8461330
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLAKLDYHKEQANQLKNLVQCGDFPHLLVYGPTGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITTPSKKKLEINTIASNYHLEVNPSDAGNSDRVVIQELIKTVAQSQQ
IQSSAQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIGPIRSRCL
AVRVPLPSVEELCSVLSGVCRKEGLLLPPELARLIADKSGRNLRKALLMCEACRVQQYPF
SPDQDIPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPEVIMKGLVTELL
SNCDGHLKAEVAQMAAYYEHRLQLGSKAVYHLEAFVAKFMAIYKKFMEDGLDNFMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatgggtggataaatacagaccaacgtcattggctaaactcgactaccacaag
gagcaagcaaaccagctcaaaaatctggtccagtgtggtgattttccacatttgttggtt
tatggaccgactggtgctggtaagaaaacccggatcatgtgtttgctcagagagctgtac
ggagccggtgtcgagaaacttcggattgaacaccagtccatcacgactccatctaaaaag
aagcttgaaatcaacacaattgccagcaactaccatctagaggtgaatccaagtgatgct
gggaacagtgaccgtgtggtcattcaggaactgatcaaaactgttgcccagtctcagcag
attcagtccagtgctcaaagggagttcaaagtggtgctgctgacagaggtggaccgtctc
actaaagatgcccagcatgccttgcgccgtacgatggagaagtacatgtctacttgtcga
ttgatcctgtgctgtaactccacctcaaaagtgattggccccatcaggagcaggtgtctg
gctgtgagagtccccctaccaagtgtggaagagctgtgcagtgttctgtcaggtgtgtgc
aggaaggagggactgctgcttcctcctgaactggccagactgatcgctgacaaatctggc
cgtaaccttcgtaaagccctgctgatgtgtgaggcctgcagagttcaacagtatccattc
tccccagaccaggacatccccgagacagactgggaggtttacctcagagagaccgctaat
gctatagtcagccagcagagccctcaaagacttttggaggtccgggcacgattgtatgaa
cttctgactcactgtattccgccagaagttatcatgaagggcctggtgacagagttgcta
agtaactgtgatggacacttgaaggctgaggtggctcagatggcggcatactacgaacac
agactgcagctgggcagcaaagcagtctaccacctggaggcttttgtagctaaattcatg
gccatctacaagaagtttatggaagatggacttgacaactttatgttttga
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integrated database retrieval system