Carassius gibelio (silver crucian carp): 128021078
Help
Entry
128021078 CDS
T08819
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128021078
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
128021078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
HTH_40
Pribosyltran_N
Motif
Other DBs
NCBI-GeneID:
128021078
NCBI-ProteinID:
XP_052463953
LinkDB
All DBs
Position
A10:8708257..8817546
Genome browser
AA seq
1488 aa
AA seq
DB search
MAANAGSMFQYWKRFDLKQLQKELDATAGALANRQDESEQSRKKLIDQSREFKKNTPEDL
RKQIAPLLKGFQAEIDALSKRSKESEAAFLSVYKRLIDVPDPVSALEAGQQLQVTGRKMH
DLETENQRLKDTLQEYEREIAEVKNQEVTIKALKEKLEQYEHSLQAKNTEEAPDQNQDPS
GREEGESKGENLPNNYADKESQPQPSQDSRTEDLDMKTQSLQTALEATQAELDELKIKYD
EESTAKANEIEAVMTDLERANQRAEAAEREAVSLREQLTSAQPSNQIQKAPEMDKSPEAL
SCSNLEAELGAKEREVERLAEDVQRLQASLAQLSETSTNQISQLEQQLSSKEALLKQLEE
KLQEQSDYEEIKRELGSLKSVEHNSSDHHSSVQDSSKPLEMLLTGKVHSQLSESALKRLA
NNDFSGSVRRKSKETTVENPQRLPATPVPTTLQGSPPPPSPQLLMRTGTATSESAASANG
THPFSPTGIGPDFFTPGMASVGATFPPLAGKMALNSLLQRQLMQTIYTKALHDTSPSSVL
FGPPHYATTNSLSSPLPPQSAGSPEVNGLAPSPSQSEGAGSTSEGEEMDTSEIARQVKEQ
LIKHNIGQRVFGHYVLGLSQGSVSEILARPKPWSKLTIRGKEPFHKMKHFLSDEQNILAL
RSIQGRQRENPGQNLNRVFQDVPKRRTGSEGSTRPGNITTRIRTPETGSDEAIKSILEQA
KRELQVQKADGVGERHRRSGYHRGSGSYFQIYAHSLRLVESSQPPSSSSSSDENIRSILE
QARREMEAQQVALEPVLKANSMAPTDLSLLGSPLSTLPYTPIAQSLKKPSTSPLLDFHSG
VKKEMGEVAVSDVGVDGVPKLGRLSESGGGLGGGSWREHWWSTGLSERRGTGQPSVSEDA
HGQEDSKEKLPRLGSTAPVAPASSLDYWKDWPSSESPYSQSSELSLQMPSGSETPQSSPL
PSSSPLLSLPKVAKPVVPPLTPEQYEYYMYQEVDTVDLTQQVKDKLAKNGICQRIFGEKV
LGLSQGSVSDMLSRPKHWSKLTQKGREPFIRMQLWLNGELGQALLPMPGQTQEITPKTSA
SCSPAPESPLSSAEESVKSQQEEQMCQASIQEPSETSESQPGTPLPLPLPGHAGLSIQEM
VAMSPELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLARPKPWHKLSLKGR
EPFVRMQLWLNDPRNVEKLMDMKRMEKKAYMKRRHSSIGESHLLESGLSGSDLTQSASPQ
NLSQQHQQQQQQQQQHQPHLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELASQLNLK
TSTVINWFHNYSLVRGSHRSRIRRELFIEEIQAAAGEGGSPSARPGKSGGEGDNSCDGTE
SDSTAEGRPSGSEERRGLLESPNLSHRDEEGEAEFPSASGTSRPRGGIIDSLFGIPESVS
TAPATATATPCRNPKDSSLRKKKAANLNNIIHRLEKAANRDEPHEWEF
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgcgggatcgatgtttcaatattggaaacgctttgatttgaagcagctc
cagaaagaactggatgccaccgccggagccctagccaacagacaggatgaaagtgagcag
tccaggaaaaaactcatcgaccaaagccgcgagttcaagaagaacactccagaggatttg
cgtaaacagatagctcctttgctgaagggcttccaagcagagatcgacgccttgagtaaa
agaagtaaagaatcagaggctgctttcctcagcgtgtacaagagattaatcgatgtccca
gatcctgtctcggctctggaggcaggtcagcaactccaggtgactggtcggaagatgcac
gacttggagacagaaaaccagagactcaaagatacactacaagagtacgaacgagaaatt
gcagaggttaaaaaccaagaagtcactattaaagcacttaaagagaagctggagcagtat
gagcattctctgcaggccaagaacacagaggaagctcccgatcagaaccaggacccatca
ggaagagaagagggggaaagcaaaggggaaaaccttcctaacaactatgcagacaaggag
agtcagccacagccgagccaggacagcaggacagaagacttggacatgaaaacgcagtcc
ttacaaacagcacttgaagcaactcaggcagaactcgatgaactgaagataaaatacgat
gaagaatccacagcaaaggccaatgagattgaagcggtgatgacagatctggaaagagcc
aatcagagggccgaggcagcagagagggaggctgtgagcctgagggaacagctcacttca
gctcaaccatccaatcagatccagaaagcaccggaaatggacaagtctccggaggcgctg
tcttgcagcaatttagaggcagagcttggtgcgaaggagagagaggtagagcgtttggct
gaggacgttcagagacttcaggccagtctggcccagctcagcgagacatccaccaatcag
atcagccagctcgagcagcagctgagctccaaagaggccctattaaagcaacttgaagaa
aagcttcaagagcagtcagactacgaggagatcaaacgagaactgggcagcctgaaatca
gtggagcacaactcatcagatcatcactcttcagtacaggactcatccaagccattggag
atgttgctgacggggaaagtccatagccagctgtcagagagcgctttgaaacgactggcc
aacaatgacttcagcggatcagtgcggcggaaaagtaaagaaaccacagtggaaaaccct
cagcgtcttcctgccactccagtccctaccacactccaggggtccccccctcccccctcc
ccccagcttttgatgaggacgggaaccgctacctccgaatctgctgccagtgccaacggt
acccatcctttctcccccacgggcatcgggccagacttctttacccccggcatggccagc
gtgggtgccacgttccccccgttagctggcaaaatggcactcaactctcttcttcagagg
cagctcatgcaaaccatctacaccaaagccctccacgacacttctccaagttctgtgctc
ttcgggccaccccattacgctacaaccaactctctctccagccccctacccccgcagtca
gcgggcagcccggaggttaacggcctggcaccctctcccagccagtcggagggtgcaggc
agtacgtcagaaggggaggaaatggacacatctgagatcgctcgacaggtcaaggagcag
ctgatcaaacacaacatcggccagcgtgtgttcggccattatgtgttgggtctgtcccaa
ggctcggttagtgagattctggcccggcccaaaccctggagcaagttgactatccgtggc
aaagagccctttcacaagatgaagcacttcctgtctgatgagcagaacatcctggcactt
aggagcatccagggcaggcagagagagaacccaggccagaacctgaacagagtgtttcag
gatgttccgaagcgaagaaccggctcggaaggctccacgcggccaggtaacatcaccaca
cggatccgcacgcctgagactggctccgatgaagccatcaagtccatcttggaacaggca
aagagagagttgcaagtgcagaaagcagacggtgtgggggagaggcatcggcgatcaggt
taccacagagggtcgggcagctatttccaaatatatgcacacagtctaagacttgttgag
agttctcagcctccgtcctcctccagcagctccgacgagaacattcgttccatccttgag
caggctcggagggagatggaggcccagcaggtggctctggagcctgtactgaaggccaac
tctatggccccgactgatctctcgctcctgggctccccgctctccaccctcccatacacc
cctattgctcagtctctgaagaagccctccacctctcctctcttggacttccacagtgga
gtgaagaaggagatgggtgaggtggccgtctcagatgtgggggtggacggtgtgcccaag
ctcggacgtctctctgagagtggaggaggtttaggtgggggttcttggagggagcactgg
tggagcacaggtctctctgagcgtcgcggaactgggcagccctctgttagtgaagatgca
cacggccaagaggatagcaaggagaagctccctcggctgggcagcactgcgcccgtggct
cctgcttcctctctggattactggaaagactggccgagctcagagtccccatactcccag
agctcagagctgagtctgcagatgcccagcggcagcgagacccctcagagcagcccactg
ccttcctcctcgcctttactgtccctccccaaagtcgccaaacctgtagtgcccccgctt
acacctgagcagtacgagtactacatgtaccaggaagtggacactgtcgatctcacacag
caggtcaaagacaaactagccaagaatggcatctgccaacgaatctttggcgagaaggtg
ctaggcctctctcaggggagcgtgagcgacatgctctctcggccaaagcactggagcaag
ctcacacagaaagggagagagccgtttatacgcatgcagttatggctgaacggagagctg
ggccaggcactgctgccaatgcctggacagacacaagagattactccgaagacctcagcc
agctgcagtcctgccccagaatcccctctgagttcggctgaagagtcggttaaaagccag
caggaggagcagatgtgccaagcgtccatccaggagcccagtgaaacttccgagtcccag
cccggcacgcctctaccgttacctctgccgggacacgcgggtctcagcatacaagagatg
gtagcaatgtcgcccgagttggacacctacgccatcactaagaaagtgaaagaagttcta
acagataacaaccttggccagcgtctgtttggtgagagcatcttgggtttgacgcagggc
tccgtgtctgatctgctggcccggcccaagccctggcacaagctcagcctgaagggccga
gagccgttcgtacgcatgcagctgtggctaaacgacccacggaacgtggagaagctcatg
gacatgaagcgcatggaaaagaaagcctacatgaagaggcgccacagctccattggtgag
agtcatttgctggagagtggtctatcaggaagtgacctcactcagagcgccagcccccaa
aacctctcccagcagcatcagcagcagcagcagcaacaacagcagcatcagccccatctg
aagaaaccccgtgtggtgctggctccagaagagaaggaagctctgaagagggcctaccag
cagaagccttacccctcccctaaaaccattgaggagttagcgagccagctcaacctcaaa
accagcacagtcatcaactggttccacaactacagtctcgttcgtggttcccacagatcc
cgtatccgacgagagctctttatagaagagattcaggcggcggccggcgaaggcgggtcc
ccctcggcgcggcccgggaagtctgggggcgagggagacaacagctgcgatggcaccgag
tctgacagcactgcagagggccgaccgagcggctccgaggagcgcaggggcctcctggag
agccccaacctcagccacagagacgaagagggcgaggccgagttccccagcgcctcgggc
accagcaggccacgaggaggcatcatagacagcctcttcggcatccccgagtctgtatcc
accgcccccgccactgccacagcgaccccctgccgaaacccaaaggacagcagtctgcgc
aagaagaaagcagccaacctcaacaacatcatccacaggctggagaaggcggcaaaccgc
gacgagcctcacgaatgggagttctga
DBGET
integrated database retrieval system
