Carassius gibelio (silver crucian carp): 128021132
Help
Entry
128021132 CDS
T08819
Name
(RefSeq) HMG box transcription factor BBX-like isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128021132
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128021132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
128021132
NCBI-ProteinID:
XP_052464067
LinkDB
All DBs
Position
A10:10646028..10678301
Genome browser
AA seq
905 aa
AA seq
DB search
MKGGGGGKEPPVEGEVSGKRPKRKCLQWHPLLAKKAPDFSEEEEEEDEEELEKEPVLCAE
SGAQEGECGGMEDDSEEYSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPSNSVSNARKKVWSLPS
NPSKDSSLAKKQPKTDSTPQLNFAMADPNKMGGLSMLLLAGEHALTAREMSSSSSQTGGT
DVAKHTGKSALFQLAEISSSPGQPAGGSMKAEDTSSLTHVEASGPSQPSSPDLPKSCVKS
PLFQLAEQISSSRSQSASEGRQCGQSALFQLAEMCLASEADKMEAGSSQPSGGSSSLCAQ
HGSSSTDITQHQEQADAPELPLTTPSSSSSSSSTSGSTSSSPTDTTPSDLSPCKTLKKKK
KKKTNKDSDENPASPKKAKKRHSPESDLDSVMFTIEAVAKGAWGLEETPRKKSHPSSSES
SPTMDQSPAVKKKAKSKPKKQLKFKDDSAEEEEEWDVETNKPQDEEMKTEEAPLTPKAES
ENEQDMKVETPSGVEDMAPHCSPPRPTELEEEKDTDTKPPQTSPEDKEPEVKPETCGSRK
SERSCKGALYKTLVSEGMLTSLRANVDRGKRGSMRGSVSDHEGGWNDESWGFSQAVTSNP
KKLKKSKSKEEATTGLGKLEEEFEKKFNSLPQYSPLTFDKKSMAITKKKKNSTSSPPEPP
KTCKGSSSSQKKTLFHKIVNKYKHRKEKSSAADKDIVPTDPMATESSPLKSGSPCVSPSP
EPQKVLDTPVGSQKRKARKSKITHLVRTADGRVSPAEAEDKFKNQDEKPFTQETLCNSGI
CYKDPRSAEADVADASGSLPAFFSLAALAEVAAMENVHRAQRAVNIPTEGQVKDIAPVLI
SCADQ
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcggaggtggagggaaagaacctccggtggagggagaagtcagcggaaagagg
cccaaacgcaagtgtctgcagtggcacccgctgctggccaagaaagctccagacttctcc
gaggaagaggaggaggaggatgaagaggagctggagaaggagccggtgttatgtgcagag
agcggagcacaggagggagagtgtggcgggatggaagatgacagtgaggaatactcctct
gaacaacgggctcgccggcccatgaacgcctttctgctgttctgcaagcgacatcgttcg
ctggtccgacaggagcatccgcgactagacaaccgaggagccactaagatcctggcggac
tggtgggccgtactggaccccaaagaaaaacaaaaatacacagacatggccaaggagtat
aaggatgcgttcatgaaggctaatcctggttacaaatggtgtcctgccaccaacaagccg
gtaaagagtccgtctaactccgtgagtaacgctcgcaagaaagtctggtctcttccatcc
aacccaagcaaggattcttcacttgccaaaaaacagcccaaaactgacagcacaccccag
ctcaactttgccatggctgatcccaataagatgggcggcctgagcatgctgctgttagcc
ggggagcatgcgctgactgccagagagatgtcctccagctcttcccagacaggaggcaca
gatgttgctaagcacactgggaaatcagcccttttccagctggctgagatttcttccagt
cctggacagccagctgggggaagtatgaaagctgaggacacaagctctctcacacatgta
gaggcctctggaccatctcagccaagttcgccagacctacctaagagttgtgttaaatca
cccttgtttcagctggcggagcagatctcctccagtaggtctcagtcagcatctgagggg
aggcagtgcggccagtcggctcttttccagctcgctgagatgtgtttggcctctgaggct
gacaagatggaagctggatcgtcgcagccctctggtggttcctcctcactctgtgctcag
cacggctcaagtagcacagacatcacacaacaccaagagcaggcggatgctcctgaactt
cctctcaccacaccatcatcatcctcatcatcttcctctacctctggctccacctcgtca
tctcctactgacaccaccccatcggatctcagcccatgtaagacgctgaagaagaagaaa
aagaagaaaacaaataaagactcggacgaaaatcctgcatcgcccaaaaaggcaaagaag
cgccattcgccagagtcggacctggacagtgtgatgttcaccatcgaagcggtagcaaaa
ggtgcttggggcttggaagaaacacccaggaagaaatctcatccctcaagtagcgagagc
agccccacaatggaccaatctccagctgtgaagaagaaagcaaaatctaaaccgaaaaaa
cagctgaaatttaaagatgacagcgcggaagaagaggaagaatgggacgtagagaccaat
aaaccacaggacgaagagatgaaaactgaggaagctcctctgacccctaaagcggagagt
gagaatgagcaagacatgaaggtggagacacctagtggtgtggaggacatggcaccacac
tgctctcctcctcgacctacagaactagaggaggagaaagacacagacaccaaaccacct
caaaccagtccggaagataaagagccagaggttaagccggagacctgtgggtccaggaag
tctgagagaagctgtaaaggagcgctttataagactctggtttccgaagggatgcttaca
tcgctgagagcaaatgtggacagagggaaaagaggttcaatgcgaggcagtgtgtccgat
catgagggcggctggaatgacgagagctggggattttctcaagctgttaccagcaaccca
aaaaagctcaagaagtccaagtctaaagaggaagccaccacaggactaggaaagcttgag
gaggagttcgagaaaaaattcaacagcttaccgcagtacagcccactgacttttgacaaa
aagagcatggcgatcaccaagaagaaaaaaaacagtacatccagccctcctgaaccgcct
aaaacctgcaagggttcatcttcatctcagaaaaagaccttattccacaagatagtgaac
aagtacaaacacaggaaggagaaatccagtgccgcagacaaagacatcgtcccaactgac
ccaatggctacagaatcaagtccactaaagtcgggcagtccatgtgtttctccctctcct
gaaccccagaaggttctggacacacctgtgggcagtcagaagaggaaggccaggaagagt
aaaatcacacacttggtgcgcacggctgatggcagagtgtcacctgcagaggcagaagac
aaattcaagaatcaggatgaaaagccattcactcaagagacattatgcaatagcgggatc
tgctataaggaccccagatcagcggaagcggatgtggctgatgcgtccggcagcctcccg
gccttcttcagcttggctgctctcgctgaggttgcagccatggagaatgtgcacagagcc
cagcgtgctgtgaacatccccactgaaggtcaagtgaaggacatagctcctgtgctgatt
tcctgtgcggaccagtga
DBGET
integrated database retrieval system
