Carassius gibelio (silver crucian carp): 128021183
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Entry
128021183 CDS
T08819
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
128021183
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
128021183
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Ank
Ank_3
PKD_channel
Ank_5
YVC1_C
BAR_4
Motif
Other DBs
NCBI-GeneID:
128021183
NCBI-ProteinID:
XP_052464160
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Position
A10:11955287..11968395
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AA seq
925 aa
AA seq
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MSQLYFRRTGNFSYRDRIPLRIVRAESELSPLEKAYLCAVEKGDYASVKQALIEAEIYFK
ININCIDPLGRTALLIAIENENLEITELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEVIKMLVQKGVSMPQPHQVRCNCME
CVSSSDVDSLRHSRSRLNIYRALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELELILNYKDNMNLLEDEENNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFSGWRRRHWASKFITCMFIGFLFPFFSLLYLIAPKSHYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHVDRMDNQELTELTKWGPVLPKQGPEPTTVEWMIL
PWVLGFVWAEIKQMWDGGFQDYIHDWWNLMDFVMNSLYLATISLKFVTYFKFSDNYGQRE
AWVMWHPALVGEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLV
LLAFANGLNQLYFYYETDGRIINNVTCKGIRCSEQNNAFTTMFETLQSLFWSIFGLVALH
VTNVEAQHEFTEFVGATMFGTYSIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKL
WMSYFEEGGTLPPPFNIIPSPKSAWYLIRWIKTHFFNIKHRKRAETFGSLGMRAAENVRT
NRQYQEVLRNLVKRYVAAMIRDGKKEEGLTEENFKELKQDISSFRYEVMGMMKGTKIGMS
NSKGNLVYPDNPLKCSSTSAGSQLKGKLRLQNVATSVIQEGGLKSNAWKPGGLRGLVDGF
ISNNSNQMNCKGPNNPGEIYSVSEEAGESENEEQDDGKQGENGNQNKESEDRVNKTSQED
DEMLYMRYMCAEEMNEEREYDGSRL
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctctactttcgcagaacgggaaacttctcgtacagggaccggatccctctg
cggatagttcgagccgagtcagagctgtcacccctggaaaaggcctacctgtgtgctgtg
gagaaaggtgactatgccagcgtcaaacaagcactgatagaagccgaaatctactttaaa
atcaacatcaactgcatcgaccctctgggacggacggctctgttgattgccattgagaat
gagaatctggaaatcactgagctgctgctcagctttaatgtgtatgtgggggatgcactt
ttacacgccatacgaaaggaagtggtgggggctgtggagctgcttttgaaccataaaaag
cccagcgggggcatgcaggtacctcctatcctgttggataaacagttctctgattttact
cctgacataacgcccatcatcttggccgctcacaccaacaactatgaggtcatcaagatg
ttggttcagaagggtgtttccatgcctcagccccaccaggtgcgctgcaactgcatggaa
tgtgtgtccagctcagacgtggacagcctgcgacattccagatcccgtcttaacatctac
cgggccctggccagcccctcgctcatcgccctctccagtgaagaccccttcctaacggcc
tttcagctcagctgggagctccaggagctcagcaaggtggagaatgaattcaagtcagag
tatgaagagctttcccagcaatgcaagcagttcgccaaagatctgctcgaccaaacacgc
agctctagagagctcgagttgattctgaactacaaggacaatatgaatctcctagaggat
gaagagaataatgatctcgccaggctcaaactggctatcaagtaccaccagaaagagttt
gtagcacagccaaactgtcagcagctgctcgcatctcgctggtacgatgagttctcaggc
tggagacgccgccactgggccagcaagttcatcacctgtatgttcatcggattcctcttt
cctttcttttcgctgctctacctgatcgctcccaagagccactatggcctcttcatccgg
aaacccttcatcaagtttatatgccacactgcttcatatctgaccttcctctttctcctg
ctgttggcctcccaacacgtggaccgaatggacaatcaagagctcacggagctcactaaa
tggggtccggtgcttcccaaacagggtccagagcccaccactgtggaatggatgatccta
ccctgggttttaggatttgtatgggctgagatcaaacaaatgtgggacggtggatttcag
gattatattcatgattggtggaacctcatggactttgtgatgaattctctgtatctggct
accatctcactgaagtttgtcacttactttaagttctctgacaactacgggcagcgggag
gcatgggtgatgtggcaccctgccttggtgggggaggccttgtttgccattgctaatata
tttagctccctacgactgatttcacttttcacagccaactcccacctgggccctcttcag
atctccctcggacgaatgctgctggacatccttaaattcctcttcatttactgcctggtg
ctactcgcatttgctaatggcctcaatcaactgtatttctattatgaaactgatggtaga
attattaacaacgtcacatgcaagggtatccgctgctctgagcagaacaatgcattcacc
accatgtttgagacattgcagtcattgttctggtccatatttggtcttgttgccctgcac
gtgaccaatgttgaggcccaacacgaattcacagaatttgttggagccacaatgtttggg
acctacagcataatctctctggtggtgcttcttaatatgctcattgctatgatgaataat
tcctatcaacatattgctgaccatgctgatattgagtggaagtttgccagaacaaaactt
tggatgagctactttgaggagggtggcacactgcctcctccctttaacatcattccaagt
ccaaaatcagcgtggtacctcatcagatggatcaagacccacttcttcaatattaaacac
agaaaaagagctgaaacatttggatcactcgggatgcgagctgctgaaaatgtccgcaca
aaccgccagtaccaggaggtacttagaaacctggttaagcggtatgtggcagcaatgatc
agggatggcaaaaaagaagagggattaactgaggagaactttaaggaacttaaacaggac
atctcaagcttccgttacgaggtgatgggaatgatgaagggaacaaagattggcatgtca
aactcaaaggggaacctagtgtatcctgataaccctctgaagtgcagttctacttcagct
ggaagtcagctaaaaggcaaactgagactgcagaatgtcgccacctctgtgatccaggag
ggtggactcaaatccaacgcctggaagcctggcggcttacgaggccttgtggatggtttc
atctcaaacaatagcaatcaaatgaactgcaaagggccaaacaacccaggagagatttac
tctgtgtcagaagaagctggtgaatctgagaatgaagaacaggatgatggcaaacaggga
gaaaatgggaaccaaaacaaggaatcagaggacagagtgaataaaacatcgcaagaggat
gatgaaatgttatatatgcgttatatgtgtgctgaagaaatgaatgaggaaagagaatat
gatggaagcagattataa
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