Carassius gibelio (silver crucian carp): 128021281
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Entry
128021281 CDS
T08819
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
128021281
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
128021281
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128021281
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128021281
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
128021281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
128021281
NCBI-ProteinID:
XP_052464345
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All DBs
Position
A10:14295600..14373452
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AA seq
1190 aa
AA seq
DB search
MDLPVVLFLLWGLSLDLLSVAVGGILYRVHEEQPPSTLIGSLAADQGLPDTGHLYKLEVG
APYLRVDGKTGDIFTTEIPIDRETLKDCRNKGRPCFLEFEVSVTDLIQNQSPRLIEGRIE
VQDINDNTPQFPSPVLTLSVPENTHVGALFSIPLATDKDTVRNGVADYTLTAGPEAVALF
GLQVAEDRGEKLPQLIVLGSLDRERKDSYDLTIKAVDGGSPPRYSSALLRVVIADANDNA
PQFEKSSYEAEVAENSPVGHSVLQVKANDSDLGPNGEIEYTLHQAIDPVPKLLRIDRSSG
IIYVKGLLDREEINNLNFYVVARDKGPSPKSSKTYVSIDVTDQNDNAPAVEIRGIGLVTH
SDGVANISEDMPVGTAVALVQVSDKDEGENAVVTCVVAGDVPFQLRPASDSSVDNKRKYF
LQTTTPLDYERVRDYRVEIVAVDSGNPALSSTNSLKVQVTDTNDNSPIFSPTLFEVKFAE
ENQPGEKVVDVVASDADSGTNAELVYSIIADSSTRGLFEIDPNSGEVRARSPLDREHKER
YEFRVTAADKGVPSHRGTATVVIKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVQ
DMDEVENAQVQLSVEPDVGKFVIQNGTGTILSSISFDREKESSYTFRLKAVDGGDPPRSS
YVGVTINVLDENDNAPVVTKPSNSSFIRLSPMAAPDSVVEVVEAEDIDSGSNAELVYSIG
GGNPHDLFYISPSNGEIILTKELTRKHSGLHRLVVKVSDRGKPSRHAIALVHIYVNETIA
NVSHVEALVGHSLYTPLDMDIAGDPDYGLAAQRSNIVYGSLAGVAGVVTVIVVVVFIRHR
LQREAKSGYQAGKKETKDLYAPKQGPKSGKGRKGKRGKPPKSPKPLGEDEESSLQKSLKF
NLDGVNDSPRIHLPLTYPPGSPDLGRHYRSNSPLPSIQLQAQSPSASQKHQAVQELPAAN
TFVGTGGDDNSTGSDQYSDYSYKTTQPKYSTKTLPHRRVTFSTANPMQDQQDSSQQSYYD
SGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDIRSLPDVAMTGNC
SQECSELGHSDACWMPGQPSPVRKTRNPPKLSTFVPYQERGSLGRLANGSVRLGAEENRP
RLPPSRSAYSSSDHNPSGHAPLEEVPLSVTSEFPPTNPPSNHTSKREIYL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggatctcccagtggtgttgtttctcctgtggggactgtcactggacttgctgagtgtt
gccgtgggtggcattctataccgcgtgcatgaggaacaacctccaagcacactgattggc
agtctggcggctgaccagggcctaccagacactggacacctgtacaaactggaggtgggc
gctccctatctgcgggtggatggcaaaactggagacatcttcacaactgagattcccata
gacagagagacactgaaggattgtcgtaataaaggcaggccctgctttctggagtttgag
gtatccgtcacagaccttattcagaatcagagtccacgactaatagagggaaggatcgaa
gtgcaggatatcaatgataacacaccacagttcccctcacctgtgctaaccctctcagtc
ccagagaacacccacgtgggggcgctcttctcaattccactggccactgacaaagataca
gtgagaaatggagtagctgactacaccttaacagcaggaccagaagctgtagcactcttt
ggtctgcaagttgcagaggacagaggtgaaaagttgcctcaactcattgtgttgggaagc
cttgatcgagaacggaaagactcctacgatctcaccatcaaagctgtggatggaggcagt
ccacctcgctacagcagtgccttgctgagggtcgtcattgctgatgccaatgacaatgca
ccccaatttgaaaaatcctcctatgaagcagaggtcgcagagaacagcccagttggacac
tctgtgttacaggtgaaggctaatgattcagacttgggtcctaatggtgagattgaatac
acattacatcaggccattgatcctgtgccaaaacttctcaggatagaccgctcatcaggc
atcatatatgtcaaaggcctgttggatcgtgaggaaatcaacaatttgaatttttatgtt
gttgcacgagacaaaggcccctcacccaaaagttctaaaacatatgtttctattgatgtg
actgaccaaaatgacaacgcaccagcagtggaaatccgaggcattggtcttgtcacccat
agtgatggagtagcaaacatttcagaggatatgcctgtaggcactgcagtggcattggtc
caggtttcagacaaggacgagggagagaatgctgtggtgacatgtgtggttgctggtgat
gttcctttccagcttcggccagccagtgattcatcagttgacaacaagagaaagtatttt
ctgcagacgacaacacctctggactatgaaagggttagggactaccgggtggagatagtg
gcagtggattcaggcaacccagctctgtccagtaccaactcgctaaaagtccaagtgact
gacacaaatgacaattcccctattttctcaccaactctgtttgaagtgaagtttgctgag
gagaaccagccaggagaaaaggtggtagatgtagtcgcctcagatgcagacagcggcact
aatgcagagctggtctacagtattattgcggactcttcaacaaggggactttttgagatt
gaccctaactcaggtgaagtacgtgctcggagccctcttgatcgtgagcacaaggagcgc
tatgaattccgtgttactgcagcagataaaggggttcccagtcacaggggtaccgccaca
gttgtaatcaaagtacttgatcggaatgacaatgatcccaaattcatgctgagtggatac
agcttctcagtcttggagaacatgccaccccttagccctgttggcatggtaacagtacag
gacatggacgaggttgagaatgctcaagtgcagctttctgtggaaccggatgtgggtaaa
tttgtgatccagaatgggactggcactattctgtccagtatctcatttgacagagagaag
gagagcagttacactttccgcttgaaagctgtagatggaggggatccaccaaggtcatcc
tacgttggagtgaccatcaatgtccttgatgagaatgataatgcccctgttgtcaccaaa
ccatctaattcatccttcatacgtctgtctcctatggctgctccagacagtgttgtggaa
gtggtcgaagctgaggacattgattccggttccaatgcagagttagtttacagcattggt
gggggaaatccacatgaccttttttatatctcaccatctaatggtgagatcattttaacc
aaggaactaactcgaaaacatagtggtctgcatcgtctggtggtaaaagtgagcgatagg
ggcaaaccttcccgccacgccattgccttggtacacatttacgtaaatgaaaccattgcc
aacgtaagtcatgtggaggcacttgtagggcatagcttgtacacaccactagacatggac
attgcaggagacccagattatggtttggctgcccaaagaagcaacattgtatatggcagt
ttagctggagtggcaggtgtggtcactgtgattgttgtagtagtcttcatcaggcatcgc
cttcaaagagaagctaagagtggttatcaggctggcaagaaggagaccaaagatttgtat
gcccccaagcaagggccaaaaagtggcaaggggagaaagggtaaaagaggtaagccccca
aaatcacctaaacctcttggagaggatgaggaaagcagtcttcaaaagagtctgaaattt
aaccttgatggggtcaacgacagccccaggatccatttgcctctgacatatccgcctgga
agccctgaccttggcaggcactaccgttccaattccccattgccttccattcagctccag
gcccaatccccatctgcatcccaaaagcatcaggctgtccaggagctccctgctgccaac
acctttgtgggaacaggtggtgatgacaactccaccggctcagaccaatactcggattac
agctacaagaccactcaaccaaagtacagcacaaaaacgctcccgcatcgcagagtgaca
ttctctacagccaatcccatgcaagatcagcaggactcctctcagcagagttactatgac
agtggtctggaggagtctgagacccccagcagcaagagctcttcaggaccacgcatcggc
cccctcgccctgcccgaggaccactatgaacggaccacccctgatggtagcatcggagag
atggaacacccagaaaacgatattcgctcactgcctgatgttgccatgacgggaaactgc
agtcaggagtgtagcgagctgggtcactcagatgcttgttggatgcctggtcagccttcg
cccgtccgcaagacccgcaatccccctaaactgtccacgtttgtgccttatcaggagagg
gggagcttgggacgcctggccaatgggagcgtgaggctgggagcagaggagaacaggcca
cgcctcccaccttcccgtagtgcctactccagtagtgaccacaaccccagtggccacgcc
ccactggaggaggtgcctctgagcgtgacatcagagttcccacctaccaatcccccatcc
aatcacacctcgaaaagagaaatatacctgtga
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