Carassius gibelio (silver crucian carp): 128021354
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Entry
128021354 CDS
T08819
Name
(RefSeq) GATOR complex protein DEPDC5-like isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
128021354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128021354
Membrane trafficking [BR:
cgib04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
128021354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
FAM104
Motif
Other DBs
NCBI-GeneID:
128021354
NCBI-ProteinID:
XP_052464428
LinkDB
All DBs
Position
A10:16182499..16205955
Genome browser
AA seq
1603 aa
AA seq
DB search
MTVIMKANRSYKLVVHKKGFGGSEDELMMNPKVFPHVKLGDIVEIAHPNDEYSPLLLQVK
SLKEDLQKETISVDQTVAQAFKLRAYQDVIINIVDPKDVTLDLVELTFKDQYIGRGDMWR
LKKSLVSTCAYVTQKVELAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQ
MSCEMWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYSAKSLEEFPE
IQRVSVRQDHEGRYYEDFYRVVDQNERRDEWMSLLITIKKLFIQYPVLVRLKGADGFLCG
SNSTAAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQR
MIDNGIGVDLVCMGEQPLHAVPLFKLHNRTVHGDSRIGDDYNLPHWINHSFYTSKSQNSC
SCFTPRIKLAGKKAHAEKAKSNKEHSLGAPKNVENSLPLQVDYDAHDAQVFRLPGPSRSQ
RSTNFRSSRERESTSRKSWGSTDVGGGVVGISPPPRPTGLEEQRSLPSDDSLSHVSNILL
IPRPAQGQYEVSSSLGYTSCTRELLEKMVDSQRDSSAPGRFTVGSAESTLHIRPGGYTPQ
RALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQVSEQRDPART
SAELLELAYHEATGSKRTISRHVGENGLYITGVPDNVSGSPASSNSTGTPVNRSSFEDYS
SPDPILLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLLP
HTDLERRDDESPVMMAHQVFEEFICQRLMQGYQIIVHPNRKPQPAIAPPLSSSPLYSRAL
VSRRKPEEEESVYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESTQIQYSYNLCPPHADA
HFLPFWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVAD
GEGHWDVYGEGIGAGRDSLSGTGDWSLLDGFIRFLEGLNRIRRRHRSDRIIRKGATIKGL
MVTGSLSPCNPEPIAPPVGKKCTSALSALLELDQTQKSLEEQQLAAQHGGKSCGPLSDAA
SVALTTTYVDSPRKDAAFILDFIRSPRSSYTCHSQLPAEQVPANHIEGGLSDKGGNQPGE
RTSATSQATGDPTLGTGGETGSSGLSLSSSSTLMEILEAIKHPTTGVQLLPEQRGLPPNC
FVSAEVVHWLVSTVENVATQGIAVEIMQKMLDEGLIMHASGDAMRTFVYGFYLYRIVDKD
YEKASTTQLPPAGASVWSAAALEDLALFQRKWFEVAFVMEERRPCDLPAFLLPWLPSRPA
SYASRHSSFSRSFGGRSQTAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGNFSLS
AAFEIKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALSSYLYGDPLRAQLFI
PLNIQCLLKEGCDSLFEGFEPETYWDRMQLFQEAILFRFGFVQDKFSASAFNFPSENKPQ
YIHVTGTVFLQLPYSKRKYSGGQRRRRNSANSSSQNLFGSEERVGYNWAYNTMLTKAWRT
GVLGDEKLADRLLRDFTDFCANKDNRLVMYWESCVEKMNASAP
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgactgttatcatgaaggcaaacaggtcctacaaacttgtggtgcacaagaagggcttt
ggagggagcgaggatgagctgatgatgaatcctaaagtctttcctcacgttaaactgggg
gatattgttgagattgcacatccaaatgatgagtacagtcctctgctgctgcaggtcaag
agtttgaaagaagacctgcagaaagaaactatcagtgtagatcagacagtggctcaggcc
ttcaagcttcgcgcttaccaggacgtcatcatcaatattgtggacccaaaggacgtgact
ttggatctggtggagctcacctttaaagatcagtatattggacgaggagacatgtggaga
ctgaagaagagcttagtgagcacgtgtgcgtatgtgacacagaaagtagagcttgctggg
atcagggcccaggccagtgaattgtgggtaaaaggagagaaggtcacttgtggctacatt
agtgaagatacaagggtggtgttccggtccacctctgcaatggtttatatattcattcag
atgagctgtgagatgtgggactttgatatttatggtgatctttactttgagaaagctgtt
aatggtttcctctcggatctgtttgccaaatggaaagagaagaattgcagccatgaggtt
acagtggtgctgttctctcgtaccttctactctgccaaatcactggaagagttcccagag
atccaaagagtgtcagttcgacaagaccacgagggacgctattatgaggatttctacagg
gtggtggaccagaatgaaaggcgcgatgagtggatgtctctacttatcactattaaaaag
ctcttcatacagtatcctgtgctggtgcgtctcaaaggagctgatggattcctgtgcggg
agcaattccacggctgctcaggggaattatctggaagctatcaacttgtctttcaatgtc
tttgataagcactacatcaaccgtaactttgaccgtacgggtcagatgtcagtggtcatt
actccaggagtgggtgtgttcgaggtggaccgcttgctcatgatcctcaccaaacagcga
atgattgacaacggcatcggtgtagatctggtgtgcatgggagagcagcccctccacgct
gttccactcttcaagttacataaccgtacagtgcatggagactctagaattggtgatgac
tacaacctgccacactggatcaaccacagcttttacacatcaaagagccagaactcatgc
agctgttttacaccacggatcaagctggctggaaaaaaggctcatgctgagaaagctaaa
agcaacaaagaacattctcttggtgcaccaaaaaatgttgagaacagcctccctctccag
gtggactatgatgcgcatgacgctcaggtcttcaggcttcctggaccttccagatcccag
aggtccaccaacttcaggtcgagtcgggagagggaatcaaccagcaggaaaagttggggc
tcgacggatgttggtggaggtgtagtgggcatctctccccctcccaggcctacaggactt
gaagaacagaggagcttgccatcagatgacagtctgagccacgtctccaacatcctgctc
atcccgcgcccggctcagggccagtacgaggtcagcagctccctggggtacaccagctgc
acaagagaattgctagaaaagatggtagattcccagagggactccagtgccccgggccgc
ttcacagtgggaagcgctgagtccaccctgcacatacggccgggcggttacacgccccag
agggctctcatcaacccgttcgccccctcacgcatgccaatgaaactcacctccaaccgc
cgccgctggatgcacacatttcctgtgggtccttctggagaggcaatccaaatccaccat
cagacgcgacagaacatggcagagctgcaggttagtgagcagagagacccggctcgtacc
tctgccgaactgctagaactggcctatcacgaagctacgggaagcaagcggacaatatcc
cgtcatgtaggagagaatggactgtatatcactggagttcctgataatgtctctggaagc
ccagcaagtagcaacagcactggaacaccagtgaaccgtagttcctttgaggattactcc
agtccagatccgatcctgctgctgtctgcccctccgacagtgcctagtttttgctgcacg
gtcggggtggactggaagtcccttaccactcccgcctgtctccccctcacgaccgattac
tttcccgaccgtcaaaccctgcagaatgactacacggagggctgctatgacctgctgcca
cacacggacctggagaggcgtgacgatgagtctccagtgatgatggcccatcaggtgttt
gaagagttcatctgtcagcgtctgatgcaaggctaccagatcattgtacatcctaacagg
aagccacagccggctatagccccgcccctcagcagcagccccctttattcccgagcgctg
gtgtctcggcgtaaaccagaggaggaggagagtgtttactggctcagtatgggaagaacc
tttcataaagtctgccttaaagataagatcattactgtcacccgctatctcccaaagtat
ccctacgaatccacacagattcagtacagctacaatctgtgccctccacatgcagacgcc
cacttccttccattttgggtggagttcagccacgagcgtctggaggagtacaagtggaac
tacctggaccagtacatctgctctgctggctcagaggacttcagtcttatcgactctctg
aagttttggcggacgcgcttcttgctgctgccagcgggcggagccaggcgcgtggcggac
ggtgagggtcactgggacgtgtatggggagggaataggggcaggacgagatagcctctct
ggcactggggactggtctcttttggatggatttatccgctttttggaaggcctgaacagg
attcgtcggcgtcaccgatctgatcgaattatccgcaaaggagccaccattaaaggcctg
atggtgacaggatccctttcaccctgcaacccagaacctatagcaccccccgtgggcaaa
aagtgcacctctgccctctctgcgcttctggagctggatcagacacagaagagtttagaa
gagcagcagcttgctgctcagcatggtgggaaatcatgtggtcctctcagtgatgctgcc
agcgttgccctaacaaccacctatgttgacagcccccgtaaggacgctgccttcattttg
gactttattcgtagtccacgttcctcctacacctgtcactctcagctgccagctgaacag
gttccagccaatcacattgagggtgggttgtcagacaaaggaggaaaccaaccaggagag
agaacatcagctacatcccaagccacaggagacccaaccctaggcactggtggagagact
gggtccagtggattaagcctttcctcatcttccacactaatggagatcctggaagccatt
aagcatcccaccactggagtgcagcttttgccagagcagaggggcctgcctcccaactgc
tttgtcagtgctgaggttgtacattggctggtcagcaccgtggagaatgttgccacacaa
ggcattgcagtagaaatcatgcagaaaatgctggatgaaggtctgataatgcatgcctcc
ggtgatgccatgcggacgttcgtttatgggttctacctctaccggattgtcgacaaggac
tatgaaaaggcttctacgactcagctgcccccagcgggagccagtgtatggtcagctgca
gctttggaggacttagccctgtttcagaggaagtggttcgaggtggcctttgttatggag
gaacgtcggccttgtgacctacctgccttcctcctcccctggttgcccagccggccagcc
tcgtatgcaagtaggcatagctccttcagccgcagcttcggtggacgcagccaaactgct
gcactgctagctgccacggttccagagcagaaaacagtcaccttggacgttgatgtgaac
aatcgcagtgatcggactgaatggtgcagttgctattaccatggaaacttctccctcagc
gctgcctttgaaatcaagctgcactggatggctgttactgcagccgtactctttgaaatg
gtgcaagggtggcacagaaaggcggcatcttgtgggttcctgcttgtacctgtgttggag
gtgccctttgctttgtcatcgtacctgtatggtgacccactccgtgctcagttgtttatc
cccttaaacatccagtgcctgctaaaggagggctgtgatagcctgtttgaggggtttgag
ccagagacatactgggacagaatgcagttgtttcaggaggccatactcttcagatttggc
tttgttcaagacaaattctcagcatcagcttttaactttccatcagagaacaaacctcaa
tacatccatgtaacaggtacagtttttcttcagctgccttactcaaaaaggaaatactcc
ggtggacagcggcgacggcgtaactccgcgaactcctccagtcagaatctatttggttct
gaggagcgagtgggctacaattgggcttacaacaccatgctgaccaaagcctggaggact
ggcgtgctgggggacgagaaactggctgaccgcctgctgcgagatttcacagacttttgt
gcaaacaaggataatcgactggtgatgtactgggaaagctgtgttgagaaaatgaacgca
agtgccccttaa
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integrated database retrieval system
