Carassius gibelio (silver crucian carp): 128021485
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Entry
128021485 CDS
T08819
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128021485
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
128021485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Motif
Other DBs
NCBI-GeneID:
128021485
NCBI-ProteinID:
XP_052464692
LinkDB
All DBs
Position
A10:19965402..19989818
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AA seq
876 aa
AA seq
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MVTSTPGLVILSVCLQLCGFSRGSRTECEQSQFQCGNGRCIPSVWQCDGDLDCSDGSDET
SCVRKTCAEVDFVCRSGQCIPKRWQCDGEPDCEDGSDESIDMCHTRTCRVNEFSCGVGST
QCIPVFWKCDGEKDCDNGEDEINCGNITCAPLEFTCASGRCVSRNFVCNGEDDCGDGSDE
QDCAPASCGPSEIPCGNNTCIPRSWLCDDDVDCQDQSDESPERCGRNPTPPAKCSTSEMQ
CGSGECIHRKWRCDGDPDCKDGSDEKNCSARTCRPDQFKCDDGSCIHGSRQCNAFRDCED
GTDEINCKNLTQCNGPDQFKCRSGECIEMNKVCNKVRDCADWSDEPIKECNMNECLLNNG
GCSHICRDLTIGYECDCMPGLQLIDHKTCGDVNECLNPGICSQICINLKGGYKCECHNGY
QMDPTTGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVAVDADFTQQMIFW
ADLGQKAIFSTVLDKQEASHSKVIDNVQMPVGIAVDWIYKNIYWSDLGSKSIAVANFNGT
RRKVLFNSGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGIDRQVLVETDIQWPNGI
TLDLIKSRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGENE
AIYGANKFTGSNVTLLASNLNEPQDIIVYHELIQLSGTNWCNEKIENGGCSFMCLPAPQV
NKHSPKFTCVCPQGQTLTSDGLRCRPEAHKVIPQDVGRVTPHPSHPKASAMPKVASEPVR
AEGNISTSIHEVNSSAKGSAAAWAVLPVLLLAMAAVGGYLMWRNWQIKNKKSMNFDNPVY
LKTTEEDLNIDISRHGASVGHTYPAISMVNTEDDLS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtctactccggggctcgtcattctgtctgtctgtcttcagctgtgtggattc
tcgcgcggttcccgaacagaatgtgagcagtctcagttccagtgtgggaacggccggtgc
atcccgtctgtgtggcaatgcgacggcgacctggactgctcggacgggagcgatgagacg
tcctgcgtgaggaagacctgtgcagaggtggacttcgtgtgccgcagtggccagtgcatt
cccaagagatggcagtgtgatggggagccggactgtgaggacggctcagacgagagcatc
gacatgtgtcacacaaggacctgtcgagtgaacgagttcagctgtggagtcggctccacg
cagtgcattccagtcttctggaagtgtgacggtgagaaagactgcgacaacggagaggac
gagattaattgtggtaacattacatgcgcccctctggagttcacctgtgccagtggtcgc
tgcgtgtctcgtaattttgtctgtaatggtgaggatgactgcggggacggcagcgacgaa
caggactgtgctcctgcctcctgcggcccgagtgaaatcccgtgtgggaataatacctgc
attcctagaagctggctgtgtgatgacgatgtggactgccaggaccaatcggatgagtca
ccggagcgctgcggccgcaaccccacaccgccggctaagtgttcaaccagtgagatgcaa
tgcggctctggggaatgcatacacaggaagtggcgctgtgacggagatccagactgcaag
gacggcagcgacgagaaaaactgctctgcccgtacctgcaggcccgaccagttcaagtgt
gatgacggcagctgtatacatggcagccgacagtgcaatgctttccgagattgtgaagac
ggcacggatgaaatcaactgcaaaaacttaactcagtgtaacggtcctgaccagttcaag
tgtcggagtggagagtgcattgagatgaataaagtgtgtaacaaggtccgtgactgtgct
gactggagtgatgaacccatcaaagagtgcaatatgaacgaatgcctgctcaataacgga
ggctgctcgcacatctgccgtgacctgaccattggttatgagtgtgactgcatgccagga
ctccagctcatcgatcacaagacctgtggtgatgtcaatgagtgcctcaaccctggtata
tgtagtcaaatatgtataaatcttaaaggaggatacaaatgtgagtgtcacaatggctac
cagatggaccccaccaccggagtgtgcaaggctgtaggtaaagagccctgtcttattttc
acaaatcgaagagacatccgtaaactgggactggagcgccgtgaatatactcagattgtg
gagcagctacggaacacagtggctgtggatgctgacttcactcagcagatgattttctgg
gctgacctggggcagaaggcgatttttagcacagtattggataagcaggaggcaagtcat
tcaaaagtgattgacaatgttcagatgcctgttgggattgcagtggactggatttacaaa
aacatctactggtcagacctgggcagtaagagtatagcagtggccaacttcaatgggacc
aggaggaaagtgctctttaacagcggcctaaaggaaccagcctctattgctgtagaccct
ctatcaggattcctgtattggtcagactggggtgagccagctaagattgagaagtccgga
atgaacgggatagacagacaggtcctagttgagaccgatattcagtggcccaatggaatc
actcttgatctgataaagagccgactctactgggtggattcaaagctgcacatgctttgt
agtgtagacttgaatggagacaaccgtcggaaggtgctgcagtcaccagactacctggcc
cacccttttgcccttacggtttttgaggatcgagtgttctggaccgatggtgagaatgag
gccatctatggcgcaaacaagttcacaggatctaatgtaactctgctggccagcaacctc
aacgaaccccaagacatcattgtgtaccatgagctaattcagctgtctgggactaactgg
tgtaacgagaagatagagaatggaggctgttcctttatgtgcctgccagctccacaagtt
aacaaacattctcctaaattcacctgtgtttgtccgcaaggtcaaacactcacttcagat
ggcctgcgctgcagaccagaggcacataaagttatacctcaagatgtagggagggtgacc
cctcaccccagtcatcccaaagcatctgcaatgccgaaggttgcctctgaaccagttcgg
gctgaaggaaatataagcacctcgatacatgaagtaaattcatctgccaaaggatctgct
gctgcctgggctgttctgcctgtgttgttattagcaatggctgcggtgggtggttattta
atgtggcgcaactggcagatcaaaaataaaaagagcatgaacttcgataatccagtatat
ctgaagaccacagaggaagacctcaatattgacatcagcagacacggcgcttctgtaggc
cacacataccctgctatttcaatggttaacacagaagacgacttgtcataa
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