Carassius gibelio (silver crucian carp): 128021487
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Entry
128021487 CDS
T08819
Name
(RefSeq) pumilio homolog 3
KO
K14844
pumilio homology domain family member 6
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128021487
03009 Ribosome biogenesis [BR:
cgib03009
]
128021487
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
128021487
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
128021487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
128021487
NCBI-ProteinID:
XP_052464695
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All DBs
Position
A10:complement(19994902..20002621)
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AA seq
627 aa
AA seq
DB search
MEAKPKKKSFTPRDGKKPSFRPKGKPGGKPQGKRPFKPHNTDKAKSFKRSAGDGGLRKFN
RKPADGKFTKKRKHPGSKDEEGPEGKKPKWGEFKQKKKELKQNRQQNEKKESYQIVSRAK
QVWEIVRRKDCDKQKRVKLMKELQTLVKGKIKTIAFAHDSTRVLQCFIQFGSDQQRQEVF
EELKEHIVELSKSKYARNIVKKFLMYGSKQQVGAVMSAFKGNVRQMLRHSEASSVVEYAY
NDKAILSQRLMLTEELYGNTFQVCKSSVCPTLEKVLEANPEKLDGIMDEMKQILTPMAQK
EAVIKHSLVHKVFLDFFEHAPAKQRTEMIESIREAVVYMAHTHDGARVTMHCLWHGTPKD
RKVIVKTLKSYIAKFAMGEYAHLVLLAAFDCIDDTKLVKQIIISEMVSSLSEVIGNKSGK
KVLLYLLSPRDPAHFLPEIIQVLEKGDGNAHSKKDVAIRRKELLEAVSPPLLKHLCENAP
SMVMDKACSVAVRDILGAAIGDLRPAMEAVAALAAGSLTPGGEDGQLHMAEHPAGHLVLK
WLIEQDAKMKEAEREERFSRILLQKVGPENLKTWASVNRGAMVLCCLLQSADESVAEEVK
VMLKSILPELQKVQNSKGVEVLLEKLV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaaaccgaaaaagaagtcgtttacgcctagagacgggaagaaaccatcattc
aggccgaaaggtaaaccaggaggaaaacctcagggcaaacgaccattcaaacctcacaac
actgacaaagcaaagagctttaaaagatcagctggagatggaggactgcggaaattcaac
agaaaaccagcagatggaaagttcacaaagaagagaaaacaccctggaagcaaagatgaa
gaaggccctgaagggaagaaacctaaatggggtgaattcaaacaaaagaagaaagagttg
aagcagaatcgccagcagaacgagaaaaaagagagttaccagattgtcagcagagcaaag
caagtgtgggagattgtaagacggaaagactgtgacaagcagaaaagggtcaaactgatg
aaagaactacagactcttgtgaagggcaaaattaaaacaattgcctttgctcatgattcc
acacgagtgcttcagtgttttattcagttcggcagtgaccagcagagacaggaggtcttc
gaggagctcaaagagcacatcgtggagttgagtaaatcgaaatatgctagaaacattgtg
aaaaagtttctaatgtatgggagtaaacagcaggtgggggcagtgatgtcggcttttaag
gggaacgtcagacagatgctcagacactccgaggcgtcttcagtagtcgagtacgcttac
aacgacaaggccatcctgtcccagagactcatgctcaccgaggagctctacggaaacaca
ttccaagtctgcaagtcctcagtttgtccaacgctagagaaggttttggaagcaaatcca
gagaagttagacggcatcatggatgaaatgaagcagatcctcacacccatggctcagaag
gaggccgtcatcaaacactcgttggtccacaaagtttttctggacttctttgagcacgct
ccagccaagcagaggacggagatgatcgagtccatcagagaggcggtcgtgtacatggca
cacacacatgatggagccagagtcaccatgcactgtttatggcacggcacacccaaggac
cgaaaagttatagtaaaaaccttgaaatcatacattgcgaaatttgcaatgggtgaatat
gctcatcttgtactattggctgcattcgattgcattgatgacaccaagttggttaaacaa
atcatcatctcagaaatggttagttccttatctgaagtaattggcaataaatctggtaaa
aaggtgttgctttacctgctgagccccagagaccctgcccacttcttacctgagatcatt
caggtgcttgagaaaggtgacggcaacgcacacagtaagaaggatgtggcgatccggagg
aaggagctgctggaggccgtgtctcctcctctgctgaagcacctgtgtgagaacgctccg
tctatggtcatggataaagcctgcagcgtggctgtgagggacatcctgggcgccgccatc
ggagatctcagacctgccatggaggccgtggcggctctggcagccggatccctcacaccg
ggaggagaagatggccagcttcatatggcagagcaccccgctggtcatctggtgttgaaa
tggttgatcgagcaggatgctaagatgaaggaggcggagagagaagagcgtttctccagg
attcttctgcagaaggtcgggccggagaacctcaagacgtgggcttcagtcaaccgtggg
gccatggttctttgttgccttctccagagtgcagatgaaagtgttgctgaagaagtgaaa
gtcatgctgaaatccatccttcctgaactacagaaggtccagaactcgaaaggagttgag
gttctgcttgaaaaactggtctga
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