Carassius gibelio (silver crucian carp): 128021501
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Entry
128021501 CDS
T08819
Name
(RefSeq) erbin-like isoform X1
KO
K12796
erbb2-interacting protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128021501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_LRWD1
LRR_13
LRR_5
LRR_NXF1-5
PDZ_6
PDZ_2
LRR_At5g56370
LRR_9
Motif
Other DBs
NCBI-GeneID:
128021501
NCBI-ProteinID:
XP_052464719
LinkDB
All DBs
Position
A10:20045749..20125941
Genome browser
AA seq
1378 aa
AA seq
DB search
MSSKRSLFVRLVPCRCLRGEEEPVTSLDYSHNSLEQVPKEIFSFEKTLEELYLDANQIEE
LPKQLFNCQMLYRLSLPDNDLAVLPPGIANLINLRELDVSKNSIQEFPENIKNCKVLSVV
EASVNPISKLPEGFTQLLSLTQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSM
HKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTFLPGMIGTLKQLRYLDVSKN
SLDMVDEQISGCENLQDLLLSNNALTQLPGSIGSLKRLTTLKVDDNQLMYLPDTIGGLTT
LDELDCSFNEIEALPSTTGQCVNLRTFAADHNLLTQMPPEMGSLKNVTVVFLHSNKLETL
PEEMGNMQKLKVINLSDNKLKNLPYSFTKLNQMTAMWLSENQSKPLIPLQKEEDPETHKT
VLTNYMFPQQPRTEDYVPSSDSESFNPSLWEEQRKQRAQVAFECDEDKDERETPPRDCNL
KRNPTPYPEELKNMVKTAQSVAHRLKEDESGDEGGKETRASDRNHLGVQDVGVKVIEGSC
INGRAVEMEPKAMMNSRQNYEPIDSLDNHHVERIPLKTSDNMRAMVNHDDTLEDSEELSY
EEEEEMKIAEMRPPLFDISINQPKVVALSKDKKDDGKDADSLLDETVANSNQNNSNCSSP
SRMSDSVSLTTDSSQDNSLCTPEREAKMPLVPKNRQEDENLNQLKQMTPLLQNCNGSETS
LQTFLKNQQSYESKSDQMTDYSLSMEERLAFIEKGIKNGVAEQYSKWDQINMNVAKLPPD
NMVSYEDLERTKSPSAKESMSSNNNAMLSLENLENGNRIQENFNGRTDQVPLRYESTRTV
STGVTALSDMSLSRSTEELSPEKKYPPAPVVKSQSIANMDGGGMKLYSIERESPPYEVAC
AARTSISGAQGQSIVRSKSASLLDDQPLQIYPGSSASSSDLLSSSKPPISSAHYPTGPPP
QYNIQYASSTVPKDNLWSQRTPVPPEQPYLQPQHSLANTNFSNRNNAPPYPQPQQRGPPK
TPDMWVKERMLPPVGQRGTLQRQGSGSSGSSMSMSDPRRMPGVEGEYMTYRDIHTAGRGP
LQMSQALHRPLSARTYSIDGPNAPRPQSARPPPHELPERTMSVSDFNYQHVSPSKRPSMR
VKSEHSLLDGPVSGGGRVPADWRDQVMRHIEAKKMEKSALSRSLATLTGSQSSLAFSAID
GWQFGAHGPSDDVFSPQGQQGYHIDTLRKVPLMNGQMCAPVRSPMSCGQPPMARHPSREQ
LIDYLMLKVSQQPPGPPRVPHETLQQELHVKIEKNPELGFSISGGVGGRRNPFHPDDNGI
FVTRVQSEGPASKLLQPGDKIIQANGYSFVNIDHGYAVSLLKMFPNTVDLIIFREMAA
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaagcggagtttgtttgtgcggctggtgccgtgccgctgcctgcggggcgag
gaggagcccgtcacctcgctggactactcacacaacagcctggagcaggtccccaaagag
atcttcagcttcgagaagaccctagaggagctctacctcgacgccaaccagatcgaggag
ctgcccaaacaacttttcaactgccagatgctctaccgattgagtctaccagacaacgac
ctggcggtgctgccgcccggcatcgcaaacctcatcaacctcagggagctcgacgtcagc
aagaacagcatccaggagtttcctgaaaatatcaagaactgtaaagtcctgtccgtggta
gaagcgagtgtgaaccctatatcaaaactcccagaaggcttcacgcagctcctcagcctg
acccagctctacctgaacgatgccttcctcgagttcctaccggccagcttcggcagacta
accaaactgcagattctggagctgcgggagaaccagttaaagatgttgccaaagagcatg
cataagctcacccagctggagcgcttggatctgggcagtaatgagttcactgaagtgcct
gaagtgttggagcagcttacaggaatcagagagctgtggatggatggaaataagctgacg
tttttaccagggatgatcgggacactgaagcagctccgctacctggacgtgtccaaaaac
agtttggacatggttgacgagcagatatccggctgtgaaaacctgcaggatctactgctg
tccaacaacgctctgacgcagctgccggggtctataggctctctgaaaagactgaccact
ctgaaggtggatgataaccagctcatgtacctgcctgacacgataggaggactcacgact
ctggatgagctggactgcagcttcaatgagatcgaggcgctgccgtccaccaccggccag
tgtgtgaacctgcggacctttgctgcagatcacaacctgctcacacagatgcctcctgag
atgggcagtttgaagaacgtcaccgttgtcttcctgcactcaaacaagctggagactctg
ccggaggagatgggcaacatgcagaaactcaaggtcatcaatctcagcgacaacaagttg
aagaatcttccatacagcttcactaaactcaaccagatgaccgcaatgtggctgtctgaa
aaccagtcaaagcccctcattcccctgcagaaagaggaggatccggagacacacaagacc
gtactcactaactacatgttccctcaacagcccagaactgaggactatgtgcccagctca
gacagcgagagctttaacccgtctctgtgggaggagcagcgcaagcagcgggcacaagtg
gccttcgagtgtgacgaagacaaggatgagagagaaacgcccccacgggattgcaatctg
aagcgaaaccccacaccgtatcctgaagaactgaagaacatggtgaaaacggctcagtcc
gtagctcacagactcaaagaggacgagtccggggacgagggaggaaaagagacccgggcc
agcgacaggaaccacctcggagtgcaggatgttggcgtgaaggtgatcgaaggttcctgc
attaatggcagagctgttgaaatggagcctaaagcaatgatgaacagtcgtcaaaattat
gagcctatagattcattagacaaccaccacgttgaaaggatccctctcaagacctcagac
aacatgagagctatggtgaaccacgatgacacccttgaggactcagaggagctgtcatac
gaggaggaggaggaaatgaagatagctgagatgagacctccactcttcgacatctccatt
aaccagcctaaagtagtggccctcagcaaggacaaaaaagatgatgggaaagatgccgac
tctttgctggatgagacggtggccaacagtaaccagaacaacagcaactgctcttcacca
tcacgcatgtctgattcagtgtccttgaccacagacagcagtcaggacaactccctctgc
accccagagagagaggcaaagatgcctctcgtccccaagaacagacaagaggatgaaaac
ctcaaccagctgaagcagatgacccctctactccagaactgtaatggctctgagacgtcc
ctacagaccttcctgaagaaccagcagagctatgaaagcaagtcagaccagatgaccgac
tacagtctctccatggaggagaggcttgccttcattgaaaagggcataaagaacggtgtg
gcagagcagtacagcaagtgggatcagatcaacatgaacgtggccaaactcccacctgac
aacatggtgtcatatgaggacctggaaaggaccaaaagtccctcagccaaggagtccatg
tcaagcaacaacaatgccatgctgtcgctcgagaaccttgagaatggcaatcggattcag
gagaattttaatggccgaacggatcaagttcccttgcggtatgagtcgacgaggaccgtc
tccacaggtgtaacagccttaagcgacatgagtctttctcgtagtacagaggagctgtcg
ccagagaagaaatatccaccagccccagtagtgaaatctcagagcattgccaacatggat
ggtggagggatgaagctgtactccatcgagagagaaagccccccctatgaagtggcatgt
gcagccagaacatctataagtggcgctcaaggccagagcatcgtccgctccaaatcggcc
tctttgctcgacgatcagccattgcagatctaccctggttcctctgcatcatcctctgac
ctgttgtccagctccaaacctccgattagcagcgcccactaccccactggcccccctcca
cagtacaacatccagtacgccagtagcactgtgcctaaagacaacttgtggagccaacgt
acccctgtaccacccgagcagccgtacctccagccccagcactccctcgccaacaccaac
ttctccaaccgcaacaacgcccccccatatccccagccccaacaacgtggcccgcccaag
accccggacatgtgggtcaaggaaaggatgctgccacctgttggccagcgaggcaccctg
cagagacaaggtagtggatcctctggcagctccatgtccatgtcggacccacgtcgcatg
ccaggagtggagggagagtacatgacctaccgggacattcatacagcaggccgtgggcct
ctgcagatgagccaggcgctccacagacccttgtcggcccgcacctatagcatagacgga
cccaacgctccccggccgcagagtgcccggcccccacctcacgagcttccggagaggacc
atgtctgtcagcgacttcaactaccagcacgtcagccccagcaagagacccagcatgagg
gtgaagtccgagcactcgttgctggatgggccagtcagcggagggggcagggttccagca
gactggagggatcaggtcatgagacacatcgaagccaagaagatggagaagagcgctctc
tctcggtctttggctactctcactggcagtcagagctctctggcctttagtgccatagac
ggatggcagtttggagctcatgggcccagcgatgatgtcttcagtcctcaaggacaacag
ggctaccatatcgacactcttagaaaagtgcctttgatgaacggccagatgtgtgctcct
gtgagatcccccatgagctgcggtcagcccccgatggcacgtcacccctcacgagagcag
ctgatcgactatctgatgctcaaagtgtcccagcagcccccggggcctccacgggtccca
cacgagacgctgcagcaggagctccatgtgaagattgagaagaatcccgagctggggttc
agtatatcgggaggagtgggtggacgcaggaatcccttccacccagacgacaacggcatc
ttcgtgacgagggtccagtcggagggacctgcttcgaaactccttcagcctggggacaag
atcatccaggcgaacggatacagcttcgtcaacattgatcacggatacgcagtatccctt
ctgaagatgttccccaacacggtcgacctgatcatctttcgagagatggccgcataa
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integrated database retrieval system