Carassius gibelio (silver crucian carp): 128021941
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Entry
128021941 CDS
T08819
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
128021941
03037 Cilium and associated proteins [BR:
cgib03037
]
128021941
Transporters [BR:
cgib02000
]
Other transporters
Pores ion channels [TC:
1
]
128021941
Cilium and associated proteins [BR:
cgib03037
]
Other cilia and associated proteins
Stereociliary proteins
128021941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
E1-E2_ATPase
Motif
Other DBs
NCBI-GeneID:
128021941
NCBI-ProteinID:
XP_052465003
LinkDB
All DBs
Position
A11:complement(1038613..1055446)
Genome browser
AA seq
831 aa
AA seq
DB search
MDGGVTSDADRVSDFEIPEDEDWVHDSFSQLIQEQCYYPYDVIEMTPLDLEEEGRGQITP
PVTSDSSLTDLCISDDVECLEADRDVPQQTDPLIEERWSSDTLRVLSSMPSRTIGRSRGA
IISQYCNRTMQLRRRRQSRPSIQHFPRSARPSICGYGVETDATDFEEEENKRERLVNNLQ
NLSAGDRVRMLRAMPLSLSEKKELRMLVLNKAEHSLSQNLIPCCSQLKYYIIIALRHGWY
GWLSFLSSLQLWQTALKRVSGRFGTGVLSYFVFLRTLLFFNVFLFLVTGLLLVVPQAISH
PHHDQDISVRSSWGLEVLTGAGYFSHSLLYYGYYNNQTLQTGHSCPASRNRMSCSSGLSY
NMPLVYFFTIFTAFFITCIILVYSMSKSFGQSFRIDKSKGLLAIKVFSSWDFKVIKKSSV
KLQRANFGTQLKELVAEVNRQEQKISVLQRLFRLFIHMLAWILCLGSTLACVLAVYYFSE
HMHGDLRSRSHTASSDSLLEEVSLLAVPVVVSSINLLLPGFFNVVSWMEKYDSPSVLNYI
SISRNLLLKVSVLGVLCYHWLGRVASDPQSLGLECWESYVGQELYRFLLMDFIFMLLDTF
FGEFLWRVFSQRALKRKRKPVFDIARNVLELIYGQTLAWLGVLFSPLLPAVQIIKLLFLF
YMKKVSLMMNCQASGKPWRACQMTTIFITLLCFPGFLGATVCVTYTMWSMTPSAGCGPFR
GLKNMFEAGKRWVHDLAAVNPDLHWLASAHSYLVENPLFLFLCAGIFLIVIYFHSQVVDG
QRKIIELLQEQIENEGEDKKFLITRLQDIHERKRRVTPRRVKGGIEDSSYS
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggacggcggggtcacttctgacgctgatcgggtctctgattttgagattccagaagat
gaggattgggttcatgactcattcagtcagctgatccaggaacagtgttactacccttat
gatgtcatcgagatgaccccgcttgacctggaggaggagggcagaggtcagatcacacct
ccagtgacatcagacagcagtctgacagatctctgtatctcagatgacgtcgagtgtctg
gaggccgacagagacgtgccgcagcagacggatcctctgattgaagaacgctggtcatct
gacacgctcagagtcctgtcctccatgcccagccgcaccatcggtcgcagtcgtggagcg
atcatctctcagtactgtaaccgcaccatgcagctgcgcagacgcagacagagcagaccc
tccatccagcacttccctcgatccgcgcggcccagcatctgcggatacggcgtggaaacg
gacgcaaccgattttgaggaagaagagaataagagggagcgcttggttaataatctgcag
aatctgtcagccggtgatcgcgtgcgtatgttgagagcgatgcctctgagtctctcagag
aagaaagagctcaggatgttggtgttgaataaagccgaacactcgttgtctcagaatctg
attccctgctgcagtcagctcaagtattacatcatcattgcgctgaggcacggctggtac
ggctggctctccttcctgtcctcgctgcagttgtggcagacggctctgaagcgtgtcagc
ggccgcttcgggacaggcgtcctctcctatttcgtcttcctcagaacgctcctcttcttc
aacgtcttcctgttcctggtcacgggtttgttgctggtggttcctcaggccatctctcac
ccgcatcatgaccaggacatctctgtcaggagctcgtggggtctggaggtgctcactgga
gctggttatttctcacactctctgctgtattatgggtattataataaccaaacgctacag
acgggtcacagctgccctgcgtccaggaacaggatgtcctgtagttctggactgtcttat
aacatgcctctcgtttacttcttcaccatcttcaccgccttcttcatcacctgcatcatc
ctcgtctacagcatgtccaagtcgttcggtcagagtttccgcatcgataaatccaaaggc
ctgctggccatcaaggtcttcagctcgtgggactttaaagtgatcaagaaaagctccgtc
aaactccagcgggcaaacttcggcacacagctgaaggagctggtggcagaggtgaaccgt
caggagcagaagatctctgttctccagcgcttgttccggctcttcatccacatgctggcg
tggatcttgtgtttgggaagcacgttagcgtgtgtgctagctgtgtattatttctctgaa
cacatgcatggggatctgcgtagccgctctcacacagcgtcgtctgattcgctgctggag
gaggtcagtctgctcgccgttcctgtcgtggtgtccagcattaacctcctcctgcccgga
ttcttcaatgttgtgtcctggatggagaaatatgattctcccagtgtgctcaactacatc
tccatcagcaggaacctgctgctgaaggtgagtgtgctgggagtgctgtgctatcattgg
ctgggccgcgtggcgtcagatcctcagagtctgggtttagagtgctgggagagttacgtc
gggcaggagctgtaccgcttcctcctgatggacttcatcttcatgctgctggacaccttc
ttcggagagtttctgtggagggtgttttctcagagggctctgaagaggaagaggaagccc
gtgtttgatatcgccaggaacgttctggagctcatctatggacagactctggcctggctc
ggggttctgttctctcctctcctgccggcggttcagatcatcaaactgctgtttctcttc
tacatgaagaaggtcagtctgatgatgaactgtcaggcgtcggggaagccgtggcgcgcc
tgtcagatgaccaccatcttcatcacgctgctgtgtttcccaggattcctgggcgccacc
gtgtgtgtgacctacaccatgtggtcgatgacgccgtcggccggctgtgggccgttccga
gggctgaagaacatgttcgaggcggggaagcgctgggttcatgatctggcggcggtgaac
cctgacctgcactggctggcctcggctcactcttatctggtggagaaccctctcttcctc
ttcctgtgcgccggcatcttcctgatcgtgatctacttccacagtcaggtggtggatggt
cagaggaagatcatcgagctgcttcaggaacagattgagaacgagggcgaggataagaag
ttcctgatcacacgactgcaggacatccatgagcgcaaacgaagagtgacgccacgccgc
gtgaaaggaggcatcgaggactccagttattcatga
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