Carassius gibelio (silver crucian carp): 128022006
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Entry
128022006 CDS
T08819
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04517
IgSF CAM signaling
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128022006
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128022006
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgib04812
]
128022006
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128022006
Intermediate filaments
Intermediate filament-binding proteins
128022006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
SLATT_6
PH_13
Motif
Other DBs
NCBI-GeneID:
128022006
NCBI-ProteinID:
XP_052465156
LinkDB
All DBs
Position
A11:2685705..2772106
Genome browser
AA seq
2346 aa
AA seq
DB search
MTTVAAEYEHMDIQQQYQESVNNRWEDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVQAV
VAVARELETENYHDIKRIAARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNANAQKFARDEEGY
KPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEAWIREKEQIL
SSDDCGKDLTGAVRLLSQHRALEDEMSGRSGHLQHTVREGQEMADAGHFGEAKIRERIAD
VQAQWAALEQLAAVRKKRLEEACSLHQFQVDADDIDAWTLDALRIVSTADVGHDEFSTQA
LVRKHKDASAEVASYRPVIDALHEQAQSLPPEQAQAANVKERLAGIEERYKEVSELNRMK
KQALQDALALYKMFSEANACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHSGHPSETDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEAER
LAGEHPDQAKAITGRLAEITAVWEEMKDTLQNREASLGEASKLQQFLRELDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEDKINSVVEAGRRLASDGNINADRIQERAASIDDRHKKNR
ESAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIEKEGTQLVSEKPETEAVVKEKLATLQKMWTELETTTQTKAQCLFDANK
AELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVSILLKKQQMLENQVEVRQKEVEELQS
QAHVLRQEGKDTDEVDGRRKEVELKFKELLEPLQKRKNFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRCDDIFERSQSILTADSPNVEA
IRSRLSDLQQLWSLIIQETEKRHARLEEAHEAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVAANHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADDLINAGHTDAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAVRLQSAYAGDKADDIQRREGEVLEAWRSLLEACEGRRTRLLDTGDKFRFFSMVRD
LMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
REMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERRRKPPT
PEPVQVQDAETQQREGEQIAQNGLPSDQDSPRDGVDGEMNGVAERSSKEPSPAPSPSADR
RVKGSQSNTLPAKGQETLSAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNHEMGFYK
DNKSAAQGVPYHSEIPISLKEAVCEVAVDYKKKKHVFKLRVTDGNEYLFQAKDDEEMNTW
IQAIQNAGSGSSSSEKSEITPSNQSTPASSRAHTLPATVSLTTESSPGKREKDKEKRFSL
FSKKKQ
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcagaatacgaacacatggacatccagcagcagtaccaggaaagt
gtgaacaaccgctgggaagacgaatgggacaatgagaacagctcggcccgattgttcgag
cgctcgcgcatcaaggctctggcagacgagcgagaggccgtgcagaagaagaccttcacc
aaatgggtgaactcgcacctgtcccgcgtgtcctgtcggatcacggatctctacatggac
ctgcgggacggacggatgctcatcaagctgctcgaggttctgtccggagagagactgccc
aagccgacgaagggccgcatgcgaatccactgtctggagaacgtggacaaggccctgcag
ttcctcaaggagcagcgcgtgcatctggagaacatgggctcacatgatatcgtggacgga
aaccaccgcctcacgctcggactcatctggaccatcatcctccgcttccagatccaagac
atcagcgtagagaccgaagacaataaagagaagcgctcggccaaggacgcgctgctcctg
tggtgtcagatgaagaccgcaggctatcccaacgtcaacatccacaacttcaccaccagc
tggcgtgacggcatggctttcaacgccctcattcacaaacacaggccagacctgattgat
ttcgacaaactgaagaagtccaacgctcactacaacctgcagaacgccttcaacctggcg
gagcagcacctggggctcaccaaactcctggaccccgaggatatcagcgtggaccatccc
gatgagaagtctgtcatcacttacgtcgtcacatactaccattatttctccaagatgaag
gccctgaaggtggagggcaaacgcatcggaaaggtgctggacaacgccatcgagacggag
aagatgatcgagaaatacgagtctctggcgtctgatctgctggagtggattgagcagacc
atcatcatcctcaacaaccgcaagtttgcaaactctctggtcggagtccagcagcagctc
caggccttcaacacttacaggaccgtagagaaaccacccaaattcactgagaaaggaaac
ctggaagtgcttctgttcaccatccagagcaagatgagggccaacaaccagaaagtgtac
atgcctcgagagggcaaactcatctcagacatcaacaaggcgtgggagcgtctggagaag
gccgaacacgagcgtgagctggcgctgaggaccgagctgattcgacaggagaagctggag
cagctcgccagacgcttcgaccgcaaggctgccatgagagagacctggctgagcgagaac
cagcgcctcgtctcacaggacaatttcggattcgacctccaggcggtcgaggcagctacc
aaaaaacatgaagccatcgagacggacatcgcggcgtacgaggagcgtgtgcaggcggtg
gtggccgtggccagagagctggagacggagaactatcacgacatcaagcgcatcgcggcg
cgtaaagacaacgttctgcgtctgtgggagtatctgctggagctgctcaaggcccgcaga
cagcggctggagatgaacctcggcctgcagcgcgtcttccaggagatgctctacatcatg
gactggatggacgagatgaagatgctgctgctgtctcaggattacgggaagcatctgctg
ggagtggaggatctgcttcagaagcacgctctggtggaggcagacatcggcatacaggct
gaccgcgtcaaagccgtcaacgccaacgcacagaagtttgccagagatgaggagggttac
aaaccctgtgacccccaggtcatccgtgaccgtgtggcacacatggagttctgctatcag
gagctgacccagctggcagcggagcgccgcgctcgtctggaagagtcccgccgactctgg
aagttcttctgggagatggcggaggaggaggcctggattcgggagaaagagcagatcctg
tcctcggacgactgcggtaaggatctgacgggcgccgtgcgtctgctgagtcaacaccgc
gctcttgaagacgaaatgagtggccgctccggacacctccagcacacggtgcgtgaaggt
caagagatggccgatgctgggcacttcggcgaagccaagattcgtgaacgtatcgcggac
gtccaggcccaatgggccgctctggagcaactggctgcggtgaggaaaaagcgcttggaa
gaggcttgcagccttcatcagttccaagtggacgcggatgacatcgacgcctggacttta
gacgcgcttcgcatcgtctccaccgctgacgtcggccacgatgaattctccactcaagct
ttggtcaggaaacacaaagacgcgtcggcagaggttgctagttatcggccagtgatcgac
gcgcttcacgaacaggcccagtcgctgcctcccgaacaggcccaggctgccaacgtcaaa
gaacggctagcaggcatcgaagagcgctataaggaggtctccgagctaaacaggatgaag
aagcaggccctgcaggacgccctggcgctctataagatgttcagcgaggcaaacgcgtgt
gagctctggatcgacgagaaggagcagtggctcaacagcatggagatcccagagaaactg
gaggacctcgaggtcattcagcacaggtttgagagtctggagcctgaaatgaataaccag
gcctcacgcgtggctgttgtcaatcagatcgccaggcagctgatccacagcggacacccg
agtgaaacagacatcaaagcccaacaagacaaactcaacaccaggtggagtcagttccgc
gacctggtggaccagaagaaagagtccctcaactcggctttgggcgtacagaactaccac
ctggactgcaacgagaccaaatcctggatccgtgagaagactaaagtcatcgagtccacc
caggagctgggcaacgacctgacgggcgtcatggccctccaacgcaagctcaccggcatg
gagcgcgatctggccgccatcgaagccaaactgggcgacctccgcggcgaggcggagcgc
ttggccggcgaacaccccgaccaggccaaagccatcaccggacggctggcagagatcacc
gccgtttgggaggagatgaaggataccctacaaaaccgcgaggcgtctctcggggaagcc
agcaagctgcagcagttcctccgagagctggacgatttccagtcctggctttcccgaacg
cagacggccatcgcgtccgaggacatgcccaacacactggccgaggccgagaagcttctg
gcccaacacgaaggcatcaagaacgagattaacaactacgaagaagactatcagaagatg
cgggacatgggcgagatggtgacgcaggggcaaacggacgctcagtacatgttcctgaga
cagaggctccaggctctagacactggatggaacgagcttcataagatgtgggagaaccgg
cagaaccttctgtcacagtctcacgcttatcagatcttcctcagagacaccaaacaagcc
gaggccttcctcaacaaccaggagtatgttctggctcatacagagatgcccaccaccctt
gaaggagcagaggctgccattaagaaacaggaggacttcatgaccaccatggacgccaat
gaggacaagatcaacagtgtggtggaggccgggaggagactggccagtgacggaaacatc
aatgctgaccgcatccaggagagagcagcctccatcgatgaccgtcataagaagaaccgt
gagtcggccgtggagctgctcatgaggctgaaggacaacagagacctgcagaagttcttg
caggattgccaggagctgtccctgtggattaatgagaagatgctgaccgcacaggacatg
tcctacgatgaagctcgcaacctgcacagcaaatggctcaaacaccaggccttcatggct
gaactacagtccaacaaagaatggctggacaaaatcgagaaggaagggacgcagttggtc
tcggagaagccggagacagaagccgtggtgaaagagaagctggccacattgcagaagatg
tggaccgaactggaaaccacgactcagactaaagcccagtgtctgtttgatgccaacaag
gccgaactcttcacgcagagctgcgccgatctggacaaatggctggtgggtctggagggc
cagatccaatcagatgactacggcaaagatctgaccagcgtcagcatcctgctgaagaaa
caacagatgctggagaaccaggtggaggtgcgtcagaaggaggtggaggagctccagtct
caagctcatgtgttgagacaggaaggaaaggacacggatgaggtcgatggacgccggaag
gaggtggagctgaagtttaaggagctgctggagccattgcaaaaacggaagaacttcctc
atggcctctcgagagatccatcagtttaaccgcgacgtggaggatgagattctctgggtt
gaggagcggatgcctcttgctacgtcgacagaccatggccataacttacagactgttcag
ctgctcatcaagaagaaccagacattacagaaggagatccagggccatcagccgcgctgt
gacgacatcttcgagcgcagccagagcatcctgacagccgacagtcccaacgttgaagcc
atccgatcccgtctgtccgacctgcagcagctgtggagcctgatcatccaggagacggag
aaacggcacgccagactcgaggaggcccatgaagcccagcagtactactttgatgcagct
gaagctgaagcctggatgagcgagcaggagctctacatgatgtctgaagagaaggccaag
gatgagcagagctcagtggccatgctgaagaaacaccagatcttggagcaggcggtggag
gactatgctgaaaccgtgcaccaactgtccaagacgagccgaggcctggtggccgcaaac
caccccgagagtgagaggatcggcatgcgtcagtcacaggtggataagctctacgccgga
ctgaaggacctatcagaggagaggagaggcaaactggaggagcgcttccgcctcttccag
ctcaaccgggaggtggacgatctggagcagtggatcgccgagagagaagtggtggctgga
tctcacgagctcggacaagactacgaacacgtcactatgttgcaggagcgtttccgtgag
tttgctcgcgacacggggaacatcggtcaggagcgcgtggacggagtcaaccgtatggct
gacgatctgataaacgcagggcacactgacgcagcgactgtggccgagtggaaggacggt
ctgaacgaggcctgggccgatctgctggagctcatcgacacacgcacacagattcttgcc
gcatcctacgagctgcacaagttctaccacgacgccaaggagatcctgggacgcatcctg
gacaaacacaagaagcttccagaagagctgggacgagaccagaacacggtggaaaccttg
cagaggatgcacaccacgtttgaacacgacatccaagctctcgggacacaggtgcggcag
ctgcaggaggacgccgtgcgtctgcagtcagcgtatgctggagacaaagcggacgacatc
cagcggcgtgaaggcgaggtgctggaggcctggaggagtctgctggaggcctgcgagggc
cggaggacacggctgctggacaccggagacaagttccgcttcttcagtatggtgcgtgac
ctcatgctctggatggaggacgtcatccgcctcatcgagacgcaggagaagcccagggac
gtgtcgtctgtggagcttctcatgaacaaccaccagggaatcaaggctgaaatcgatgct
cgtaacgacagcttcacggcctgcatcgagctgggcaaatctctcctggctcggaaacac
tacgcatcagaggagatcaaagagaagttgttgcagctgacggataagaggaaagatatg
attgacaagtgggaggacagatgggagtggcttagactgattctggaagtgcaccagttt
tcacgtgacgccggcgtggcagaggcgtggctgctgggacaggagccctatctgtccagc
agagagatgggacagagcgtggacgaggtggagaagctgatcaaacgacacgaagccttc
gagaagtcagccgccacctgggaggaacgcttctcggcgctggagcgactgaccacgttg
gagttattggaagtgagaagacagcaagaggaggaagagaggaggaggaaaccacccaca
ccagaaccggttcaggtgcaggacgcagaaacacagcagagagaaggagagcagattgcc
cagaacggactgccatcagaccaggactctccacgggatggagtggacggcgagatgaac
ggagtggctgagaggagctcgaaggagccgagtcccgccccgtctccgagcgcagacaga
cgggtcaaaggcagtcagtccaacacacttccagcgaagggtcaggagacgctgtctgcg
cagctggagggattcctgcaccgaaaacacgagtgggagggacacaacaagaaagcctcc
agcagatcctggcataacgtctactgcgtcatcaataaccacgagatgggcttctacaaa
gacaacaagagcgcggcgcagggcgtcccgtaccacagcgagatccccatcagcctgaag
gaggccgtctgcgaggtggccgtcgactacaagaagaagaagcacgtcttcaagctcaga
gttactgatggaaacgagtatctcttccaagccaaagatgatgaggagatgaacacatgg
atccaggccatacagaacgccggaagcggctcctcgtcctccgagaagtccgagatcaca
cctagcaaccagagcacccccgcctccagccgcgcccacacgctcccggcaaccgtctcc
ctgacgaccgaatccagccccggcaagcgcgagaaggacaaggagaagcgcttcagtctc
ttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
