KEGG   Carassius gibelio (silver crucian carp): 128022008
Entry
128022008         CDS       T08819                                 
Name
(RefSeq) protocadherin-20-like
  KO
K16498  protocadherin delta 1
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    128022008
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cgib01009]
    128022008
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cgib04515]
    128022008
Protein phosphatases and associated proteins [BR:cgib01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     128022008
Cell adhesion molecules [BR:cgib04515]
 Cadherins
  Protocadherins
   128022008
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th DUF4139 FAM176 Pox_I1
Other DBs
NCBI-GeneID: 128022008
NCBI-ProteinID: XP_052465165
LinkDB
Position
A11:2833550..2837859
AA seq 883 aa
MWNTKRGTCLHSKGELWGLFILLLYTSPLSCSSNFSHLIYKIKEGLPKGTLIGAISSDLK
LDLSVNPPRSFNLELKTASQQYVNLNNTSGELFTSALEIDREALCAESHEGQGCAIFLDV
LILPQQYFQLVKIKIIIEDVNDNRPHFPVGEIRVFVPENAPVNARFAVEQSAVDPDIGIH
GVQTYWLVNDYGVFTLDVEENEGGELTPFLIITESLDRETQAEYVTDIIAEDGGTPPLLG
TATLRIIIMDVNDNCPKFTESQVNVTLYGNASKGMQLARLQAYDPDEGANALITYTFSER
VTQESRNLFHLDTNTGVLKLAGKIDNNTGKLFKLIVLANGPTCIPEVATVTIHVIKQLSG
PPVVIPRYIASEKDGVVSISESEPAFSPIALFTIKNTEPQQKIECLLEGTGPFRLVPYER
FKNEYLLETTELLDYEQQQDYEIVIVVRNSHGLVVNTVVKVHVLDVNDNAPVFKQSFIEI
TVEENNPPNTFLAQLQATDADSESRGEVYYLLGADAPTIFDLDRSTGVLTVSTSLDREEK
ETYRFMVRAIDRGTPRKESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGEIGALT
VTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTSLDREQQGTYYVWIEAIDGGEPAL
SCITMVTVLLLDVNDNPPTVLFPQSNQSYMLVLPNTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRTDGEPGSFDIDPYTGNITLRKSLSNRGLYSLWVKVRDHGQPELYSTVLVNLFVNE
TVSNETLIQSLLPRSVDIDHGVLPPDKEGRKGEQVPNLCGEYQVLLLALTATCLGLFLTV
LSLVMFICCKKRKPKKKRLESEIPLNLINQEMVVKNLMEISNI
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgtggaacactaaaaggggaacctgtcttcacagcaaaggagagttatggggtttgttc
atcctcctcttgtacaccagtcccctctcctgctcgtcaaatttcagtcacctcatctat
aagataaaagaaggattacctaaagggacactcataggggctatcagttcggacttaaaa
ttggatctttccgtcaatcctcctcgctcgttcaatctggagctgaagacggccagccag
cagtacgtgaatctgaataacacgtcgggggagctgttcacatctgcgctggagattgac
agagaggctctgtgcgcggagtcccacgagggccagggctgcgcaatctttctggacgtg
ctaatccttcctcagcagtactttcagctggttaagattaaaatcattatagaggatgtg
aatgacaaccgtccgcatttccctgttggagaaatcagggtgtttgtgccggagaacgca
cctgttaacgcaaggtttgcggtggagcaatccgcagtagatcccgacatcgggattcac
ggcgttcaaacatactggcttgtaaatgactatggcgttttcacattagacgtagaggag
aacgaaggcggtgaactgacgccgtttctaatcattaccgagtctcttgatagggagacg
caagctgagtatgtgactgacattatagccgaggacggaggcactccgccgcttctaggc
actgcaactctgaggattatcatcatggacgtcaacgacaactgccctaagtttacagag
tcacaagtgaacgttacactttatggaaacgcttctaagggcatgcaactggctcgtcta
caagcctacgatcctgacgagggagccaacgccttgatcacttataccttcagcgaacgg
gtcactcaggaaagcagaaacctgtttcatttggatacaaacactggggttcttaaacta
gcgggaaagattgacaacaacaccgggaaactcttcaaactaatcgtgctggccaatggg
ccgacttgtattccagaagttgcaacggttaccattcatgtcatcaaacagctctctggc
cctccggtggttatcccacgttatattgcgtccgagaaggacggtgttgtgagtataagt
gaatcagagccagcgttttcacccattgctttgtttaccatcaaaaacacagagccacag
cagaagatagagtgtcttcttgaaggtacaggtccgtttaggcttgtaccgtatgagcgt
tttaaaaacgagtacctgcttgaaaccaccgagctattggattatgagcagcaacaggat
tatgaaattgttattgtggttcgcaactctcatggattagtagttaacactgtagtgaag
gtccatgtgctggacgttaacgacaatgctccggttttcaagcaatctttcattgaaatc
acagtggaggagaacaacccgccaaatacattcctcgctcagcttcaggccaccgatgca
gacagtgaaagcagaggcgaggtgtattacctactcggcgctgacgctcccaccattttt
gacttggatcggtcaaccggggtactgacggtgtccacttctcttgaccgagaggaaaag
gagacgtatcgtttcatggtgcgagccatagaccgtggcacgccgagaaaggagtcgatc
gccactgtgattatcaccgtccaggatcggaatgacaacagtccaaggttcatcaacaag
gacttcaccttcttcgtgccggagaactttccaggttttggggaaattggcgctcttact
gttacggatgcagacgctggggagaacggctgggtggcgttgtccattcttaacgggagc
gacatcttcgtgattgacaccggacgaggagcgctgcgggccaagacctctctggaccgg
gagcaacagggaacgtactacgtttggatcgaggcaattgacggaggcgaacctgctctc
tcttgcatcacaatggtgactgttctcctcctggatgtcaacgataaccctccaactgtt
cttttccctcagtccaaccagtcgtacatgttggtgcttcccaacacgcttccaggaacg
tctataacggaggtttacgcggtggaccgggacactggaatgaacgctgttattgcgtac
agcatcatcaagagaacggatggagagccgggctcgtttgacattgacccctacacggga
aacatcaccttgaggaaatccttaagtaatcgaggcctctacagtttgtgggttaaagtc
agggaccacggtcaaccagaactctactctaccgttctggtcaacctgtttgtgaatgag
acagtcagcaatgagaccctcattcagagtttgttgcccagaagtgtagatattgaccat
ggtgtgcttcctccagataaggaagggaggaagggcgaacaagtgccaaatctgtgtggc
gagtaccaagtgttactgcttgcactgacggctacctgcctgggattatttctgaccgtt
ttgtcgctggtgatgttcatctgctgcaagaaaaggaaaccaaaaaagaagaggttagag
agtgagattcctttaaatctcatcaaccaagaaatggtggtcaagaacctaatggaaatt
tcaaacatctga

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