Carassius gibelio (silver crucian carp): 128022105
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Entry
128022105 CDS
T08819
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128022105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128022105
03041 Spliceosome [BR:
cgib03041
]
128022105
03032 DNA replication proteins [BR:
cgib03032
]
128022105
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
128022105
Spliceosome [BR:
cgib03041
]
Complex A
U1 snRNP components
Sm proteins
128022105
U2 snRNP components
128022105
Complex B
U1 snRNP components
128022105
U4/U6.U5 tri-snRNP components
128022105
Complex C
U2 snRNP components
128022105
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
128022105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
DUF777
Motif
Other DBs
NCBI-GeneID:
128022105
NCBI-ProteinID:
XP_052465311
LinkDB
All DBs
Position
A11:complement(5020498..5023367)
Genome browser
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRIMLKGDNITLLQSVSN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagaggacaaggacagaaggttcagaaggtcatggtgcagccgatcaacctt
atttttaggtatctacagaatcgttcccgaatccaggtatggctctacgaacaggtcaac
atgcggatagagggctgcatcattggatttgatgagtacatgaatttggttttggatgac
gcagaggaggttcacatgaagaccaagaacaggaagccccttgggcggattatgttgaaa
ggagataacatcacattgctgcagagtgtgtccaactga
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