Carassius gibelio (silver crucian carp): 128022139
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Entry
128022139 CDS
T08819
Name
(RefSeq) sortilin-like
KO
K12388
sortilin
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128022139
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
128022139
NCBI-ProteinID:
XP_052465368
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Position
A11:5725369..5744770
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AA seq
815 aa
AA seq
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MSTVFCCVLVVLCSVALCMDFEERPSISRRSEQTVFLKSHKTRNLLSLRDSQQPDHVKMK
RSEESAQNQCKSLHDYDPTLKNNTHTYNFNDLSGSVSLAWVGDGTGVLLVLTTFQLPLFI
MRFGQSRLYRSEDYGKTFQDITDLINKTFIQTEFGIAISPDNSGKVILTGDLTEGRVTKI
FRSVDFGKSFVTSELPFHPLMQITYNPRDSNKLLVYSINNDLWLSEDFGANWRKIHETVC
LVKWGMDDTIFLTTNPNGSCSDRGTLELRKSLDYGKTFKTIGSRIYSFGLGGRFVFASVM
TDSGSTRMIHVSVDQGETWDMAQLPTVGHEQFYSILAANYDMVFMHVDEPGDSGIGTIYV
SDDRGTVFSKSLERHLYTTTGGDTDFTNITSLRGVYMTSVLAVDRSVQTVITFNQGGEWQ
PLQKPWNGVCDSTTDYSDKCSLHIHASYSISMKLNVPMQPLSEPNAVGLILAHGSVGGSV
SVLSPDVYASDDGGYTWFQALKGPHHYAILDSGGLLVAVEHNPSHPISQIKFSTDEGQCW
HVHNFTDEPMYFTGLASEPGARSMNVSLWGYRETVRNQYWVSVTVDFRQLLSRDCQENDY
IQWLAHSSDISDPTDGCNLGYKERFLRLRKDSVCWNGRDYIVTKEPTTCPCTLTDFQCDF
GFYHAENSSVCVEQPDLIGHSLEFCLHGRKEQLQTSGYRKIPGDHCEGGITPERKEIDLS
KKCVSNLLRTELLTEEHSFNSAPIIAVVIAVLLISAVAGVHFIKKYVCGGRFLVHRYSVL
QRHAEANSIDGVDDLDTLEVGKIHYHDDSDEDLLE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgtgttctgctgtgttttggttgtattatgctcagttgctctgtgcatggac
tttgaagagagacccagcatctccaggaggagtgagcaaaccgtgtttctaaagagtcac
aaaacacgaaatctgctcagtttgagagattcacagcagccggaccacgtcaagatgaaa
aggagtgaagaatccgcacaaaatcaatgcaaatcactgcacgactatgatcccacgtta
aaaaacaacactcatacgtataacttcaatgacctgagtggctccgtgtctctggcctgg
gttggagacggcacaggggttctgctggtgctgaccacattccagcttcctctttttatc
atgcggtttggtcagtccagactgtacagaagtgaagactatggaaagacgttccaggac
atcaccgaccttattaacaaaaccttcatacagaccgagtttggcatcgcgattagtcct
gataattccgggaaggtgatcctcacaggtgatctaaccgaggggagagtgactaaaatc
ttccgttctgttgattttggcaagagctttgtgacctctgagcttcccttccatccgttg
atgcagatcacatacaaccccagagacagcaacaaactcctggtctacagcatcaataat
gatttatggctgtctgaggacttcggggccaattggaggaagatccatgagactgtttgt
cttgtgaaatggggaatggatgacaccattttcttaaccacaaaccccaatggatcctgc
agtgaccggggaacacttgaattgagaaaatctttagactatggcaaaacattcaaaact
ataggaagcaggatttattcctttggcctgggtggacgctttgtttttgcctcagtcatg
accgactctggctccacacgcatgattcatgtctcagtagatcagggggagacgtgggat
atggctcagctgcccaccgttggccacgagcagttctactccattctagccgcaaactac
gatatggtcttcatgcacgtagacgaacctggagactcaggtattggtaccatatatgtt
tcggatgaccgaggtacagtgttttccaagtctctggaacgccatttgtacaccactaca
ggcggagacactgacttcaccaacatcacctctctgaggggcgtatatatgaccagtgtg
ctcgccgtggatagatctgttcagacagtgatcacatttaatcaaggtggagagtggcaa
ccactgcagaaaccctggaacggagtttgtgactccacaaccgactactccgacaagtgt
agtctgcatattcatgcctcctacagcatctctatgaaactgaacgtccccatgcagccc
ctctcagagcccaatgccgtgggactcatcctggcacatgggagtgttggaggttcagtt
tctgtgctttctccagacgtgtatgcgtctgatgacgggggttacacatggtttcaggca
cttaaaggtccccatcactatgccatactagattcaggaggactgctggtagcagtggaa
cacaacccctcacaccccatatcacagatcaagttttccactgatgaaggtcagtgttgg
catgtgcataacttcaccgatgagccgatgtacttcactgggctggcatcagaacctggt
gcccggtccatgaacgtcagcctgtggggctacagggaaaccgtccggaatcagtactgg
gtttctgtcaccgtcgacttcaggcagttactctctagagactgtcaggaaaatgactac
atccagtggctcgctcactcaagcgatattagcgaccccactgatgggtgcaatctggga
tacaaggaaaggtttttacggttacgaaaggactcagtctgctggaacgggcgggattac
attgtcaccaaggagcccacgacatgtccctgcaccctcactgactttcagtgtgacttt
gggttctaccatgcggaaaacagctctgtttgtgtggagcagcccgaccttattggccat
tcactggagttctgtctgcacggacgcaaagagcagctccagaccagcggttaccggaaa
attcctggggatcactgtgaaggaggaataactccagaacgaaaagagatcgatctgagt
aagaaatgtgttagtaatttgctgaggacagagctactgacggaggaacattcattcaat
tctgctcctataatcgctgtggtcatcgctgtcctgttgatcagtgctgtcgctggggtt
catttcatcaaaaaatatgtctgtggaggacggttcttagtgcacaggtactcagtatta
cagcgacacgctgaagctaacagtatcgatggtgtggatgacctggacacactggaggtt
ggcaagatacactaccatgatgattcagatgaggacctcctagagtga
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