Carassius gibelio (silver crucian carp): 128022160
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Entry
128022160 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP-like isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128022160
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128022160
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128022160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_11
zf-RING_UBOX
WEMBL
Crescentin
FmiP_Thoc5
Zn_ribbon_8
zf-RING_Vps41
zf-C3HC4_4
Fez1
Lzipper-MIP1
DUF2968
zf-RING_5
CENP-F_leu_zip
KASH_CCD
T3SSipB
DUF1664
KxDL
zf-RING-like
FANCL_C
GAS
LRRFIP
ANIS5_cation-bd
HIP1_clath_bdg
RINGv
COG3_N
KIF9
AAA_13
MscS_porin
DUF948
zf-RING_16
CC2-LZ
MAD
Motif
Other DBs
NCBI-GeneID:
128022160
NCBI-ProteinID:
XP_052465409
LinkDB
All DBs
Position
A11:6245571..6250792
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AA seq
453 aa
AA seq
DB search
MPIRAYCTICSDFFDNCKDVAAIHCGHTFHYVCLLQWFQSAPNKTCPQCRKQVSTRHIIN
KLFFDIAPEDDGAPADPESLQNELDRMKAVLSEKEKEWRDRQKSVDTLKDTIERQKRDLE
RLRKEIGDKEMLCSVLRKQMNFLESQKIEGQAAKEEAKRLRVKMKTYESLDVVLQGQRSE
VEAMITDMGVGQSAVEQLSIYCISLKKEYDNLKGSLKSSNEMCEKLKRELFSSNNKLQKA
TAETNGTKEDMKALQNDLSNADKEITSLKKKVEILQRTLSTPTRTNEAISRLVFESPAPL
ELKPPGRGLMTDSQEIDLNLTFDINTPEQVERKPVQVPSKKMRLETSVSSSKNMENALGR
TKSRVKEDDVMMGPMLRNSLLFRKNTLGSMLDPCKFGTVRSGYDGLGGRAKFIQPSPLSE
IRPLAMKSKRKKVSRPITSKPTSSLTTLDAFLE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcccattcgagcatattgcaccatctgctcagatttctttgataattgcaaagatgtc
gctgcaattcactgtggccacacttttcattatgtatgtcttctccagtggtttcagtcg
gccccaaacaaaacctgtccacaatgcaggaaacaggtcagtacgcggcacattatcaac
aagctgttctttgacatagcaccagaggatgatggggcgccagctgatcctgaaagttta
cagaatgagcttgatcgcatgaaagcagtgttgtctgaaaaagagaaagaatggagggac
aggcagaaatcagtggacactctaaaagacacaatcgagaggcagaagagggacctggaa
agactccggaaggaaatcggagacaaagagatgctgtgttctgtcctccggaaacagatg
aatttcttggagagtcagaaaattgaaggccaggcagccaaagaggaagccaagcgactc
cgggtcaaaatgaaaacctatgaaagcttagatgtggtcctacaaggtcagaggtcagag
gtggaggccatgatcactgatatgggtgttggtcagtctgctgttgaacagctgtccata
tactgcatctcacttaaaaaggagtacgacaatctgaaaggaagcctcaaatcatcaaat
gagatgtgtgagaaactaaaaagggaactgttctcttctaacaacaagttgcaaaaagcc
actgcagagacaaatggaacaaaggaggacatgaaagcacttcagaacgacctttccaac
gcagacaaagagatcaccagcttgaagaagaaggtggaaattctgcagcggacattaagc
actccgacccgcaccaatgaggccatcagcagactggtcttcgaaagccctgctcctctg
gagctgaagcctcctggtcgtggtctgatgactgactctcaggaaattgacctcaacctg
accttcgacattaacacacccgaacaggtggagaggaaacccgttcaggtgccatctaag
aagatgcgtctggaaacttcggtatcatcatccaaaaacatggaaaatgcactcggacgt
actaagtctcgtgttaaagaagatgatgtcatgatggggcccatgttaaggaactcactg
cttttcagaaagaacacgttagggagcatgctggacccatgcaaatttggcactgtaaga
tctggctatgatggacttggaggaagagccaaatttatccaaccttctcctttatctgag
attcgacccctcgccatgaagtccaagaggaagaaggtgtccaggcccattacaagcaag
cccacctccagcctgaccactctggatgctttcttggaataa
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