Carassius gibelio (silver crucian carp): 128022194
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Entry
128022194 CDS
T08819
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
128022194
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
128022194
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
128022194
NCBI-ProteinID:
XP_052465462
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Position
A11:7312723..7374267
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AA seq
1137 aa
AA seq
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MHLSVFLFLLLWAQALTLKNLNYSIPEEKIQGVIGNIAKDAELELGEQGKKSNFRVLENS
APHLIDVDPESGLLYTKQRIDRETLCRQNTKCQLSMEVFANDKEICMIKVEIQDINDNAP
SFPAEQIDIDISENAVPGTRFPLAAAFDPDTKENGLKTYQITRDDYSIFSLDVKSRGDGT
KFPELVVQRALDREERSHHTLIITATDGGEYPKSGTMQINVKVTDSNDNSPVFEQPTYVV
EVPENSPPGTVLIDLNATDPDEGVNGQVTYSFSCYVSDRIKELFSIDPRTGVVKIQGKID
FEENPIIEIDVQAKDQGPNPIPGHCKVTVKVLDRNDNWPSIGFVAVRQGAVSEAAAPGTV
IALVRVTDKDSGRNGQLQCRILGNVPFKLEENYDNFYTVVTDRPLDREVKDEYNITIVSK
DNGNPPLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPDLGQNG
TVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPHLESN
TTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHIITTVRAVDNDFGESGRLTYE
ISDGNEEHLFEIDSVTGEVRTAQPLWEEVAPVVELIIKVTDHGKPSLSAMAKLIVKAYSG
PLPEGEPRINAEHHNWDMSLPLIVTLSIISIMLLAAMITIAVKCKRENKEIRTYNCRIAE
YTHPQLGKGKKKKINKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQTRLPLSS
PRSEVMYLKPTTNNLSVPQGHVGCHTSFTGPVTNTTETPVNRMSIIQTDNFPAEPNYMGN
RQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKATGLKPQ
PLEQEEDCVNCTEECRVLGHSDRCWMPQFTTGAGGAGTPQGEGSDYRTNLFVPAGMEAVA
VETETYETVCNPNGKKTFCTFGKERRDHTILVANVKPYLKTKRALSPLLQEVPSASCSPT
KGCNTGSPCSSAKGMGDGAESKPSTSHYGPPDGQYISPNKQNREQGYSTLPHSDPVAKVL
AAARSRISQETAVEMDSVLEQGRGEMGRGTMDADQVVRDIDKLLQDCRGNENSPVRK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttctgttttccttttcctacttttatgggcgcaagccctgacgttgaaaaac
ttgaactactctatacctgaggagaaaattcagggcgtcattggaaacattgccaaggat
gcagagctggaactgggagagcaggggaaaaaatccaacttcagggtgttggagaactcc
gccccacaccttatcgacgtggatcctgaaagtgggctattgtacacaaaacagaggatc
gacagggaaacactgtgcagacaaaacaccaagtgccagctctccatggaagtgtttgcc
aacgacaaggagatctgcatgattaaagttgagatacaggatataaatgacaacgcacca
agctttcctgcagaacagatcgatatcgacatatctgagaacgcagtcccaggcacacgt
ttccccttggctgctgcctttgaccctgacactaaggaaaatggcctgaaaacatatcag
atcacgcgcgatgattatagcatattctctttggatgttaaatccagaggggacggaact
aaattccctgaattggtcgttcaaagggccttagatcgagaggaacgtagccatcacacc
ttgattataactgccacagatggaggggaatatcccaaatcaggtacaatgcaaatcaat
gtgaaagtcactgattccaatgacaacagccctgtgtttgaacagcccacatatgtagtg
gaagtccctgagaattcacccccaggcacggtactgatagatttaaatgctacagatccc
gatgaaggggttaatgggcaggttacttattcttttagctgttatgtctcagacaggatc
aaagagctgttctcaatagacccccgaacgggtgtggtaaagattcagggtaaaatcgac
tttgaggagaacccaattatagagattgatgttcaggcaaaggatcaaggccccaaccca
attcctggccattgtaaagtcaccgttaaagtgcttgacaggaatgacaactggccatca
ataggtttcgtagctgtgcgtcagggggcggttagtgaagcagcagctccagggacagtg
atcgcactcgttagagtcacagacaaagattcaggccgcaatgggcagctccagtgtagg
attttggggaatgttcctttcaagctggaagagaactatgataacttctacacagtagtg
actgacagacccctggacagggaggttaaagatgagtataacatcacaattgtctccaaa
gacaatggcaacccacccctgaactcaacaaagtctttcactgttaagattctagatgaa
aatgacaatgcaccccgcttcacaaaaatggtctacctcctccaggtgcctgaaaacaac
atcccaggggaatacctgggttctgttcttgctcatgacccagatttgggccaaaatgga
acagtatcctattcccttcttccttctaatgtaagtgaggaatccatcactacatatgtt
aacatcaaacccactgatggtgcaatttatgccctgaggagttttaactatgaacaaacc
aagtattttgactttaaggtccaggcgaaggattcaggtaaccctcacctggagagcaac
accactgtccgtgtcagtgtgctggatgttaatgataacattcctgtcattgtccttccg
ttacttcagaatgacactgctgagatccatgtgcctcggaacgtgggagtcggacacatt
atcaccaccgtgagagcggtggacaatgatttcggtgaaagcggccgtctcacctacgag
atctcggatggcaatgaggaacacctgtttgagattgactcggtgacaggtgaggtacgg
acagcccagccattgtgggaggaggtggcacctgttgtggaactcatcatcaaggtgact
gaccatggaaagccatcactgtctgccatggcgaaacttatcgtcaaagcctactccggg
cccttaccagagggtgaaccacgcatcaacgcagaacaccataactgggacatgtcgctc
ccactaatagtaaccctgagtatcatctcaattatgctcctcgctgccatgatcaccatc
gcagtcaagtgcaaacgggagaacaaggagatccgcacatacaactgtcgcatcgccgag
tacactcatccacaacttggcaagggcaagaagaagaagatcaacaagaatgacatcatg
ctagtgcagagcgaagtggaggagcgggacaccatgaacgtgatgaacgttgttagcagt
ccctctttggccacctcgcccatgtacttcgactaccaaactcgtctgcccctcagctct
ccaaggtcagaagtcatgtacctcaaacccaccaccaacaacctcagtgttcctcaaggg
cacgttggctgtcataccagcttcacgggacctgttacgaacaccaccgagaccccagtg
aacaggatgtcaataatacagacagacaattttcctgctgagcccaattacatgggtaac
aggcagcagtttgttcaaagcagctcgacgttcaaagatccggagcgagccagtctcaga
gacagcgggcacggggacagcgaccaagcggacagcgatcaggacactaataaaggctcc
tgctgtgacatgtctgctaaggaagcgctcaagatgaaggccactgggctcaagcctcaa
ccacttgagcaggaggaggattgtgtcaactgcacagaagagtgtcgagtgctcggtcac
tctgaccgttgttggatgccccagtttaccacaggagccggaggagcgggaactccccaa
ggcgagggctcggactaccgcaccaacctcttcgtaccagcaggcatggaggcagtcgca
gtggagaccgaaacttatgagacggtttgcaaccccaatggcaaaaaaactttctgcaca
ttcggaaaggagcgtcgggaccacaccatcctcgtggcaaatgttaaaccctacctaaag
accaaacgtgccctcagccctctcttgcaggaggtcccgtctgcctcatgtagccccacc
aaaggctgcaatactggttccccatgctcttcggccaaaggtatgggtgacggagctgaa
agcaagcccagcaccagccactacggacccccagatggacagtacatctccccaaacaag
cagaacagagagcagggctactccacgctgcctcactccgaccccgtagccaaagtcctg
gccgcagcacgttcacgaatcagccaggagacggcggtggaaatggacagcgttttggag
caaggcagaggagagatgggccgtggaaccatggacgcagaccaggtggtcagagatatc
gacaaactgctgcaggattgtcggggaaatgaaaactcccccgtcagaaagtag
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