Carassius gibelio (silver crucian carp): 128022232
Help
Entry
128022232 CDS
T08819
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
128022232
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128022232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_CHD1_Hrp3
PHD_2
DEAD
Chromo_MIT1
AAA_22
HMG_box
Motif
Other DBs
NCBI-GeneID:
128022232
NCBI-ProteinID:
XP_052465541
LinkDB
All DBs
Position
A11:8601612..8633440
Genome browser
AA seq
1997 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDVPDEDEDGVRRRSVPLSPLERFFSEDDSVKQHKKKKPSKM
MEGKEPKVKKKKKKEGLPSGLDDMSDREDHGHRSGSESSTYSTLKKKKKKPKEKKERKTK
QRKKDDDEDDDDDDDGNMKEPKSSSQLMQEWGLEDVQYAFSEDDYKTITNYKAFSQFLRP
LIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGTSATAVAAAVAAAVETVNVAPPICIRS
IQQISPSGPIKKAKTKEGKGPGAKKKSKPVKETKKKGKPKKSKSKAGQGGKRKKGSSSEE
DFLDDFSDFDDISIHSASVRSDTSAAPKKKSTRKGQKKRKTGEDGDGYETDHQDYCEVCQ
QGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDEEEEDEVAGEE
EDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKGKVQK
ILHWVWGDPPLPPEVPLGQDGEKVDGLAKMPLKGRPERQLFVKWAGLSYWHCSWVSELQL
ELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNNEKRRSKDPQYAAMEERFYRYGIKPEW
MIIHRILNHSFDKDGDVHYLIKWRDLPYDQCTWETDDFDVPYYDSFKQAYWDHRNQMLGE
SHHPLLFRKGKRLKEEIKRREPPPDTPVVDPTIKFEQQPWYIDDTGGTLHPYQLEGLNWL
RFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMW
APDFYVVTYTGDKDSRAVIRENEFTFEDSTVKFGRKVFRMKKDTPIKFHVLLTSYELITI
DQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYRIYYKLLLTGTPLQNNLEELFHLLN
FLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVE
LSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPN
GSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKYERID
GGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAF
SRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDD
ILKFGTEELFKDDVEAARTMGDNKEGEEGSVIHYDDNAISKLLDRSRDATEDTEIQNMNE
YLSSFKVAQYVVREEDGEEEVQREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGK
RIRKQVNYNDASQEDQEWHDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKSDRD
KPLPPLLARVSGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSNWLVRDLRGKSEKEFR
AYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKFS
TPDLIPVGLELKKLTESVSSDPNTPVPASPVPTQPSTPVPLEKTESVSCSQEDKEIIEPE
STKSMDPEQPVIQEPFPAPEKTNDGEEPKSPERKGMEESKKNDTPSVHSEPSSNQAQPPT
KPSEQTSNQTPLDCRKGKETSPERGENKASPAKIDDKEQKPAIPDDFKSEDPPENQLNGE
KDARDDTDESHRDDKNSIKTRFMFNIADGGFTELHTLWQNEERAAVSSGKMYDIWHRRHD
YWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLLEQALV
IEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVL
NQLEELLSDMKADVTRLPSMLSRVPPVSARLQMSERGILSRLTTRGNEPPPQQPFPQGSF
GCSQMFNSSFAGGFRGPGGTAMVNYSQMPLGPYVSVSSNGPPAPTSHLEKKSSDALRDVA
TPDLKSGKPSDVICIED
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatcgctaagcaatgaagatgaggggcaagacgatatggattttgaggacgac
gtgccagatgaggatgaggatggtgtacgtcggaggagtgtccccctgtcacccttagag
aggtttttctctgaggatgattcggttaaacagcataagaagaagaaacccagcaagatg
atggaggggaaggagcccaaagttaagaaaaagaagaaaaaggaggggcttcctagtggg
ctagatgacatgtcagacagagaggatcatggtcacaggtcaggaagtgagagcagcacc
tacagcaccctgaagaagaaaaagaagaagcccaaagagaagaaggagaggaaaactaaa
cagcgaaagaaagacgatgatgaagacgacgatgatgacgatgatggaaacatgaaggaa
ccaaagtcatccagtcagctgatgcaagagtggggtctcgaagatgtgcagtatgccttc
tcagaggacgactataaaaccatcaccaactacaaagccttcagccagtttcttaggccc
ctcattgccaagaagaaccccaagatccccatgtcaaaaatgatgacggtgctcggagcg
aaatggagagagttcagcgcgaacaaccctttcaaaggcacctctgcaactgctgtagcg
gctgccgtggccgctgccgtggaaactgtcaatgtggctccgcccatctgtattagaagt
atccaacagatctcaccatctgggccaatcaaaaaagccaaaaccaaagagggaaagggg
cctggcgctaaaaaaaaaagcaagccagtgaaagaaacaaaaaagaaagggaaaccgaag
aaatccaaatcgaaagcaggccagggtggaaaaaggaaaaaaggctcttcgagtgaggag
gatttcctggatgacttttcagactttgatgacatcagcattcacagcgcctctgtacgc
tcagatacttcagcggcacccaagaagaagtcgacccgcaaaggacagaaaaaaagaaaa
acaggagaggatggagacggctacgagacagaccatcaagactactgtgaggtttgtcag
cagggaggagagatcattctatgcgacacctgtcccagagcatatcacctggtgtgtctt
gatccagaactggagaaagcccctgagggcaaatggagctgcccccactgtgaaaaagaa
ggcattcaatgggaggccaaagatgatgaggaggaagaggatgaggttgctggtgaggag
gaagatgaccacatggagttctgcagagtgtgtaaggatggaggagagctgctgtgctgt
gacacctgcccttcctcctaccacatccactgtctcaacccaccgcttcctgaaattccc
aacggagaatggctgtgtccacgatgcatgtgtccaccactaaaagggaaagtccagaag
attctgcactgggtgtggggcgatcctcctctaccacccgaggttcctcttgggcaagat
ggagagaaggtggacggtttggctaaaatgccactaaagggtcgtccagagaggcagctg
tttgtgaaatgggctgggctgtcctactggcactgctcctgggtcagcgaactacagttg
gagctatatcacacggtgatgtaccgtaactaccagcgtaagaacgacatggatgaaccg
ccaccatatgactacggctctggggaggaggagcttaacaatgagaagaggaggagcaaa
gaccctcagtatgcagcgatggaggaacgattttaccgttacggcataaagccagagtgg
atgatcattcatcggatcctcaaccacagttttgataaggatggagatgtgcactacctg
attaagtggagagatttgccatatgatcagtgcacctgggagaccgatgacttcgacgtc
ccatattatgacagctttaaacaagcctactgggaccacaggaatcagatgctcggtgaa
agccatcaccccctgctgttcagaaagggaaagagacttaaagaggaaataaagagaaga
gaacctccaccagacactcctgttgtggatcccaccatcaagtttgaacagcagccatgg
tacattgatgatacagggggaactttgcacccataccagctggaaggcctgaactggttg
cgattctcttgggcccaaggaaccgacacaatcttggctgatgaaatggggcttggcaag
actgtgcagactatagtgttcctgtactcactctacaaagagggtcactccaaagggccg
tttctggtcagtgcgccactctccaccatcatcaactgggagagagagtttgagatgtgg
gctccggatttctatgttgtgacttacacaggggacaaagacagcagggctgtcatacgc
gagaatgaatttacctttgaggacagcaccgtcaaatttggtcgcaaggttttccgaatg
aagaaggacacaccgataaagtttcatgtcctgttgacgtcatatgaactgatcaccatt
gatcaagcaatacttggctccattacctgggcctgtttggttgtggatgaagcccaccga
ctgaagaataaccagtcaaagtttttcagaattctgaatggctacagaatctactataaa
ctgctcctgaccggaacccctctgcagaacaatctcgaagagctttttcacctgctcaac
tttctcaccccggagcgcttcaataacctggagggctttctggaggagtttgcggacatc
tcgaaagaggaccagattaagaaactacacgacctgcttgggccacacatgctcaggaga
ctgaaggcagatgtgtttaagaacatgccagcaaaaaccgagctcatagtgcgggtcgag
ctcagcccgatgcagaaaaaatactacaagttcattttaacacgtaactttgaggcattg
aattccaagggaggagggaaccaggtgtctcttcttaacatcatgatggacttgaagaaa
tgttgcaaccatccctacctgtttccagttgctgcagtggaagctccggtcttacccaat
ggttcttatgatgggaacctcctggtgaaatcctcaggaaaactcaccctgctacagaag
atgctcaaaaaactgaaagatgaagggcacagggttctcatcttctctcagatgacaaag
atgctagacctgctagaggacttcctggagtttgaaggatataaatatgagcgtattgat
gggggcatcacaggggggctgcgacaggaggccattgatcgctttaacgcacccggagct
cagcagttctgttttctgctgtccacacgtgctggaggattgggtatcaatctggcaacc
gcagacactgtgatcatatatgactctgactggaacccacacaatgatattcaggcattc
agcagggcacatcgtatcgggcaaaataaaaaggtgatgatctatcgctttgtaactcgg
gcatctgtagaggagcgtattacccaggtggccaagcgaaagatgatgctgacccacctg
gtggtgcgccctggcttgggctctaagacgggctccatgtccaaacaggaactcgacgac
atcctcaagtttggcaccgaggagctgtttaaagacgatgtggaagccgccaggacaatg
ggagataataaagaaggagaggagggtagtgtgatccactacgatgataacgccatttct
aaactgctggaccgtagccgggatgccaccgaagacacagagatccagaacatgaacgag
tacctgagctcatttaaggtggcgcagtatgtggtgagagaggaggatggagaggaggag
gtccagagggagattattaagcaggaagagaatgttgatccagactactgggagaagctc
ttgaggcaccattatgagcagcagcaggaggatctggcccggaacctgggcaaagggaaa
cgaatccgcaaacaggtcaactataatgacgcctctcaggaggaccaagagtggcacgac
gatctttcagataatcagtctgagtactctgttgggtccgaggatgaggatgaagatttt
gaagaacgccctgaaggaggacgcagacaatctcgaagacagttgaagagcgatcgggat
aaaccattgccgccgttgctggctagagttagtggcaatatagaggttttgggatttaac
gcccggcagcggaaagccttcctgaatgcgattatgcgctggggtatgcccccacaagat
gccttcaactctaactggctggtccgtgacctgagagggaaaagtgagaaggagttcagg
gcttatgtgtctctgttcatgaggcacctgtgtgagccaggggcagatggagcagaaaca
tttgcagatggggtcccgagggaaggcctgtcccgccaacatgttctcacccggattggt
gtaatgtctctggtccgcaagaaggttcaggaatttgagcatgtgaatgggaagtttagt
acaccagatttaatccctgtaggattggagctgaagaaacttactgaaagtgtgtcgtcg
gaccccaacacacctgttcctgccagtccagttccgactcaacccagcacacctgttcct
ttagaaaagacagagtcagtgtcttgttctcaagaagacaaggagattatagaaccagag
agcaccaaatcgatggaccctgagcagccagttattcaagaacccttccctgccccagag
aaaactaatgatggagaagaaccaaaaagtcctgaaagaaaaggaatggaagagagtaag
aagaatgataccccgtctgtccattcagagccatcgtccaatcaagcacagccacccaca
aaacctagtgagcagacatccaatcagacaccattagactgtcgtaaagggaaagaaact
tctccagaaagaggggaaaataaagccagcccagcaaaaatagatgataaggagcaaaag
ccagccattcctgatgattttaaatctgaagacccccctgagaaccaactgaatggagag
aaagacgcgagggacgacacggacgagagccacagagatgacaaaaacagcatcaagact
cggttcatgtttaacatcgcagatggtggattcacagaattacacacgctgtggcaaaat
gaggaacgtgcagctgtatcatctggcaaaatgtacgacatctggcaccgtcgccatgac
tactggctgctggctggcattgtaacacatggctatgcccggtggcaggacattcagaat
gacccacggtacgccatcctcaatgagcctttcaagactgaaatgcacaaagggaactac
ttagaaatgaagaataaatttctcgccaggcgttttaagctcctggaacaggctttggta
attgaagagcagctacggcgcgctgcatacctgaatatgactcaggatcccagtcacccc
gccatggccctcaacacacgtttcgcagaggtggagtgcctggctgagtcccaccagcac
ctctccaaagagtcacttgctggtaacaagccagccaatgctgtgctgcacaaagtgttg
aatcagctggaggagctgttaagcgatatgaaggctgatgtgacgcggttgccctccatg
ctttcgagggtcccacctgtctctgcccggctccagatgtcagagcggggcatcctcagc
aggctcaccacccgaggcaacgaaccgccacctcagcagcctttccctcagggctctttc
ggctgttctcagatgtttaatagcagtttcgccggaggtttccgtggacctgggggcact
gcgatggtgaactacagccagatgcccctggggccgtacgtcagcgtgtcctcaaatgga
cctccggcgccaaccagccaccttgagaagaagtccagcgatgctctgcgagatgtggcc
acccctgatctgaaatcaggcaaacctagcgatgttatatgcattgaggactag
DBGET
integrated database retrieval system
