Carassius gibelio (silver crucian carp): 128022305
Help
Entry
128022305 CDS
T08819
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03083
Polycomb repressive complex
cgib04980
Cobalamin transport and metabolism
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128022305
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
128022305
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128022305
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
128022305
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgib03036
]
128022305
03029 Mitochondrial biogenesis [BR:
cgib03029
]
128022305
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128022305
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
128022305
HMT complexes
COMPASS/SET1 complex
128022305
MLL-HCF complex
128022305
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
128022305
Mitochondrial biogenesis [BR:
cgib03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
128022305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_5
Kelch_1
Kelch_4
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
128022305
NCBI-ProteinID:
XP_052465653
LinkDB
All DBs
Position
A11:10645345..10661647
Genome browser
AA seq
1776 aa
AA seq
DB search
MTSTGSAVPGTTGAPLQPRWKRVQGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGEIPPGCAAYGFVCDGTRLLAFGGMVEYGKYSNDLYELQASRWE
WKKLKPKAPKSGAPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSNTVGWDIPVTYGVLPPPRESHTAVVYTEKATKKSRLVIYGGMSGCRLGDLWTLDIDT
LTWNKPAISGVAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDTLSWETVLMDTLEDNIPRARAGHCAVGINNRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPNPPSRVQLVRANTNSLEVSWGAVSTADMYLLQLQKYDIPAATAATSPSLNAVPSL
PGNSPKSPAPAAAAPSAQSLPQSGFTLVPQAASPTASVLPSTPASPVAASTARGPAILKV
AAPQSGTGTSYVTVRQASQAGKSPVTMTSLPAGVRMVVPAQTTQGTPIGSSPQMSGMAAL
AAAAAATQKIPPSPGATLLNVPAGATIVKTVAVTPGSTTLPNTVKVGSPVMVSNPATRML
KTAAAQVGTPTVSSPTTAARPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPLSM
GGNLISSLGKVMSVVQTKPVQTSAVTGQASSNPVTQIIQTKGPLPPGTILKLVTSADGKP
TTIITTSQAGGTGNKPTILGISGMSPTSTKPGTTTIFKTIPMSALQQGAAGLTSSTGVKS
PITIITSKMMTSGTGTPGKIITAVPKIGTAAGQQGLTQVVLKGAPGQPGTILRTLPMGGM
RLVSPVSGVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGSLASANATLATPVTTLGTI
ATLSNQVITATAVSAAQSNLNTVTSTMQPTQVTLITTPSGVEAQPVQDLPVSILASPTSE
QATSTESGAGDGSGNVTLVCSNPPCETHETGTTNTATTATANMGTGPAGTVQRVCSNPPC
ETHETGTTNTATTASANMGAVQRVCSNPPCETHETGTTNTATTASSNMGTAPAGTVQRVC
SNPPCETHETGTTNTSTTASSNMGGNQTGTVQKVCSNPPCETHETGTTNTSTTASSNMGG
NQTGTVQKVCSNPPCETHETGTTNTATTATCSMETDEGTAQQSDEVSESTTSTEGLPSTA
ASQSRAITIVTQATPLPGPAVPSISSITESSSDAGAEPVVMESSEAESLQTEGQAEAEAV
SMQAEFQTESGEVAMPSDFQAEAAALPSDFQGEAIAVAMQAESQAEEGAVPMEHDASSMA
EGGTAQEQLPTAEMEGVEAVSASQAEALALPPELMSDGQPTTLMVTGLTPEELAVTAAAE
AAAQAAATEEAQALAIQAVLQAAQQAVMSSGDAGGDNQQTHTIPIVLTQQELAALVQQQQ
QLQAAQQAAAQAALPTEGLAPADSLNDPSSESNGHNEVAAAATSTVVGLLPSTSAESMCE
ALAPSCTLAPAVVASPAKMQAAAALTEVANGIVAVKQNPPTVTVKPQVKKENQWHDVGIV
KVTNMVVTHFYMPADDAAYVEDDSGTIPDYSQMKKVDLQPGTAYKFRVAGINTCGRGAFS
EISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKITEYSVYLAIQSSQTTEVK
PSAPAQLAFMRVYCGPNPSCLVQSSILSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRW
LQESNKDGLSAKPAPKRAVSSPDTKGIGQKKARMDQ
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccggttccgctgtgcctggcaccaccggagctccgttgcagccgcgatgg
aagcgggttcagggatggtccgggccggtcccccgaccgagacacggacacagagccgta
gccatcaaggagctcatggtcgttttcggcggaggaaacgaaggcatcgttgacgagttg
cacgtttataatacagcaacaaaccagtggttcataccagctgttcgtggagagattcct
ccagggtgtgcagcttatggttttgtatgtgatggcactcgtctattagcttttggtgga
atggtggaatatggaaagtacagcaatgacctttatgagttacaggcaagcagatgggaa
tggaaaaaattgaaaccaaaagcccctaaaagtggagcaccaccatgccctcgcctgggc
cacagtttttctcttgtgggcaacaagtgttatctttttggagggcttgccaatgacagc
gaagaccccaagaacaacattcccagatatttgaatgacctttatacccttgagctgcgt
ccgggctccaacactgtgggctgggatataccggtcacatatggtgtacttcctccgcca
agagagagccacactgctgtagtttatactgaaaaagctactaagaagtcccgtcttgtt
atatacggtggaatgagtggttgccgtttgggagatctttggactttagatattgataca
ctgacctggaacaagcctgcaataagcggcgtagctccccttccccgtagcctccactca
gccaccacgattacaaacaaaatgtatgtttttggtggctgggttcctttggtgatggat
gatgtgaaggtggccacgcatgagaaggaatggaagtgtacaaacacactggcctgcctg
aacttggacaccttgtcttgggagactgttttgatggacactttggaggacaacatacca
cgtgcacgagcaggacattgtgctgttggtattaacaacagactttatgtttggagtgga
cgggatgggtaccgcaaagcttggaacaatcaggtgtgctgcaaagatctctggtacctg
gagaccgagcgacctaatcccccttcacgggtacagcttgtccgggccaacacaaattct
ttagaggttagctggggagcagtgtctacagcagacatgtacctgcttcagcttcagaaa
tatgatatcccagcagccactgctgccacatccccatccctcaacgctgttccctccctc
cctggaaactcgcctaagagtccagcgcctgccgcagctgcaccgtctgctcagagtctg
ccgcaaagtggcttcaccctcgtgccccaggcggcttctcccacagcctcagtcctgccc
agcacacctgcaagtcctgtggctgcctcaaccgcacggggcccagctattctgaaagtt
gcagcccctcagtcgggcaccgggacgtcgtatgtcactgttcggcaggccagccaggcc
ggaaaatccccagtcactatgacatcacttcctgcaggtgttcgcatggtagtgccagca
cagaccactcaaggaacgcccattggcagcagccctcagatgagtggaatggcagctttg
gccgcagctgctgcagccacacagaaaatccctccttctcctggagctactcttctcaat
gtgccggcgggggccacgattgttaaaacggtggctgtgacacctgggtccaccactctc
cccaacaccgttaaagtgggatcacctgtcatggtaagcaaccctgccactcgcatgctg
aagactgcggctgcacaggtgggcactccgacagtgtccagtcccaccacagctgctcgg
cccatcatcaccgtgcacaagtctggcacagtaaccgtagcccagcaggctcaggttgtg
accacgatggtgggtggagtcaccaagaccatcactcttgttaagagcccactttccatg
ggaggaaacctgatttccagcttgggcaaggtgatgtcagtggtacagaccaaaccagtg
cagacatctgctgtgactggacaggcctcctccaacccagtgactcaaattatacagaca
aagggtcccctcccacccggcaccattctgaaactggtaacgtctgcggatggaaagcca
accaccataattaccaccagtcaagcaggtggcactggaaacaaacccactatcttgggt
atcagtggcatgtcccccacaagcaccaaaccaggcaccaccactattttcaaaacaatc
cccatgtctgctctacagcagggagctgcaggcctgactagtagtacaggggtgaagagc
ccaattacaatcatcacctcaaagatgatgacatctggaacaggaactcctggcaaaatt
attacagcagtgcctaagattggtacagcagctggccagcaaggcctgacacaggttgtt
ctgaagggagctcctggtcagcctggaaccattcttcgcactttgccgatgggaggaatg
cgactcgtgtctccagtatctggggtcaagccaactgtaaccacgctggttgtcaaggga
acaactggtgtaacaacacttggcacagtcacaggaactgtttctaccagcttagctgga
ggaagcttagccagtgccaatgccaccctggcaactcccgtcaccactctgggcacgatt
gccaccctctcaaaccaggtcattactgctaccgctgtgtcagctgcccaaagcaacctg
aacactgtcacctctaccatgcagcccacccaggtgactctcataactacacccagtggt
gtggaggctcagccggtccaagatctgcctgtttccatcctggcctctcccacctctgag
caggccacctctactgagtctggtgcaggcgatggttctggaaatgttactttagtgtgc
tctaacccaccctgtgagacccacgagacgggcaccaccaacacggccaccacagcaaca
gcaaatatgggcactggaccagctggcacagtacagagagtgtgctccaacccgccctgc
gaaacgcatgaaacgggtacaacaaacaccgccacaacagcatctgccaacatgggcgct
gtacagagggtctgctccaacccaccctgtgagacccatgagactggcaccaccaacacc
gcaaccacagcatcttcaaatatgggcactgctcctgctggcactgtacagagggtctgc
tccaacccaccctgtgagacccacgaaacgggcaccaccaacacctcaacaacagcgtca
tctaacatgggcggaaatcaaacaggaacggtgcaaaaagtctgctcgaacccaccctgt
gagacccatgagacaggcaccaccaacacctcaacaacagcgtcatctaacatgggcgga
aatcaaacaggaacggtgcaaaaagtctgctcgaacccaccctgtgagacccatgagaca
ggcaccaccaacacagcaaccactgctacctgcagtatggagactgatgagggaacagct
caacagagtgatgaagtatcagaatctaccactagtacagaaggcctgccttccactgca
gcttcccagagcagagccattaccatagtcacacaggccacacctctaccaggaccagct
gttccgtctatctcttcaatcacggagtcgtcctcagatgccggagctgagccggttgtt
atggagagttcggaagcagagtctttgcagacagaaggccaggctgaagcggaggcagtc
tccatgcaggcagagttccagacagagtcgggggaagtggctatgcccagtgacttccag
gcagaggcagcggccttgccgagtgacttccagggagaagccatagcagtagccatgcag
gcagagagccaggcggaagaaggggcagtgcccatggagcatgacgcttctagcatggca
gagggaggaacagctcaggagcaactacctacagcagagatggagggtgtagaagcggtg
tcagcatcacaggccgaggcgctggccttgccaccagagctgatgtcagatgggcaaccc
acaacactgatggtgactggtctgaccccagaggagctggccgtcacggcagctgcagag
gcagcggcccaggctgcagcgacagaggaggcccaggccctcgctattcaggctgtactg
caagcagcacagcaggctgttatgagctcaggtgatgctggaggagacaaccagcagacc
cacaccatacccatcgttctgacccagcaggaactagcagctttggttcagcagcaacag
cagctccaggcagcccagcaagctgctgcccaggccgcactgcccacagagggcttggct
ccggctgacagcctaaatgatccctcctcagaaagcaatggacacaatgaggtcgccgcc
gctgccacaagtacagtagtgggactgctgcccagcacctcggcagagagtatgtgtgaa
gccttggctccatcctgtacattagcacctgcagtagttgccagtccagctaaaatgcag
gcagctgcagctctgactgaagtggccaatggtattgtggctgtgaaacaaaaccctccc
actgttacagtcaaacctcaagtgaaaaaagaaaaccagtggcatgatgttggcattgtc
aaagtcaccaacatggttgtaacgcatttctacatgcctgcagatgacgccgcttatgtt
gaggatgattctggcacaatacctgactacagccagatgaagaaggtggaccttcagccc
gggacggcctataaattccgtgtggctggtataaacacatgtggccgtggagccttttcg
gaaatatctgctttcaagacctgtttgccgggtttcccaggggcaccatgtgccataaag
atcagcaagagtccagacggtgctcatcttacatgggagcctccatccgtgacatcagga
aagatcaccgagtattctgtgtatttggccatccagagcagccagaccaccgaggtgaaa
ccctcggccccggcccagcttgccttcatgcgcgtttactgtgggccaaacccctcatgc
ctggtccagtcctccatcttgtccaacgcccatatagactataccaccaaacccgccatc
attttccgcatcgcggcacgcaacgagaaaggttacggcccggctacacaagtgcgatgg
ctgcaagagtctaacaaagatggcctttctgcaaagcctgccccaaaaagagcagtttct
tcaccagatacgaaagggattggtcagaagaaagcaagaatggaccaatga
DBGET
integrated database retrieval system
