KEGG   Carassius gibelio (silver crucian carp): 128022313
Entry
128022313         CDS       T08819                                 
Name
(RefSeq) lysine-specific demethylase 5B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cgib01009]
    128022313
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    128022313
Enzymes [BR:cgib01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     128022313
Protein phosphatases and associated proteins [BR:cgib01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     128022313
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    128022313
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHDvar_NSD zf-PHD-like GlgE_dom_N_S PHD_2
Other DBs
NCBI-GeneID: 128022313
NCBI-ProteinID: XP_052465670
LinkDB
Position
A11:complement(10958279..10976921)
AA seq 1473 aa
MTQSRPNEFIPPPECPVFEPSWEEFADPFGFINKIRPIAENTGICKIRPPPGWQPPFACD
VDRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKTLDLYVLYKLV
KEDGGFDVVCKERKWTQIALKMGFAPGKAVGSHLRAHYERILYPYHFFQTGANLMNSQKP
TLTNDTKDKEYKPHDLPQRQSVQPVETCTIARRAKRTKGRCFKSELGEVCEKPNLRRRMG
SYVAKPEPVKNLSVDVKEEPVEQKVEGEKSKVEQYICLVCGGGGDEDRLLLCDGCDDSYH
TFCLIPPLHDVPKGDWRCPKCLAQECGKPQVAFGFEQASRDYTLRTFGDMADSFKSDYFN
MPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKDFGSGFPVKNGTFKVSPEEEGYL
SSGWNLNNMPVLDASVLTHVTADICGMKLPWLYVGMCFSSFCWHIEDHWSYSVNYLHWGE
PKTWYGAPGYAAEQLENVMKNLAPELFESQPDLLHQLVTIMNPNVLMEHGVPIYRTNQCA
GEFVITFPRSYHSGFNQGFNFAEAVNFCTADWMPLGRLCVEHYRSLNRYCVFSHDEMTCN
IATKANALELELASAVQKDMCAMILEEKMLREKAYKLGVWHSQQVDYDLLPDEERQCAKC
RTTCYLSAITCPCSPDQLVCLHHIEDLCSCAARSYTLNYKYTLAELKPLFQALTARAESY
EDWASKVDKTLKADQDNKSDLEEFRSLVVEAEKKSYPETDLLSHLRQVIQNADRCTSMAQ
HLLNGKRQTRYRSGGGKSQNQLTVEELRSFVNQLYDLPCSIRQTPFLKALLNRVEQFQQE
SSDLLAEDMPGSSALQRLLDEGASLDVELPQLAVLRQRLEQARWVEAVQEASDQPADLSL
DCMRRLIDQGVGLAPHACVERTMARLQELLTVCEHWEEKAHNMLTARPHHSIETLDAAIQ
EVDRIPAYLPSCLQLKDCVSRAREWIMEADALQAGGRVPGLAALSELVSRARGISVKLEP
LTRLESLISEVQAWKESAAKTFLLRNASHSLLEVLCPRCETGPQKSKSKKSKDVSVPCKK
VEVKLDSLFDVEKVLSMSTDTASAMATLSDVHQKELESLSMLRTSNESKFQSSPSCLAPT
VCLCHTVPAGPMLQCELCREAYHSGCVPGFKDIQTGLPWLCPLCKRSEKPPLDKVLPLLA
SLQRIRVRLPEGDALRYVIERTVRWQHKVQQVPPTPHPNGKVRHISGIASSQTLVGSNGS
FYMLQPCIPLNELGAELEELLVEGLLLQVTLPELQQLYSSLLSRFSPSQHSLQSSEHDHQ
YHIAQDRGPPHRSPPHNKEPDGVSETKKEPEKLEKNSKRRLEKENIEGQHRDKIKKPKKK
KPKMKKERRREEKQTTSPSNSLSDLSYSDDSEEDWSVCSAKQCQQPEGNEVNWVQCDGSC
NQWFHQICVGVSAEQAEKEDYICVSCAINNLTA
NT seq 4422 nt   +upstreamnt  +downstreamnt
atgacccagtcacgacccaacgagtttattcctccaccggagtgccctgtctttgagccc
agttgggaggaatttgccgacccttttgggttcatcaacaaaatacgtcccattgcagaa
aacacgggcatctgcaagatccgaccgcccccgggttggcagccaccatttgcctgtgac
gtggacagactgcatttcactccacgcattcagaggctcaatgagttagaggcccagacc
agagtgaagctcaacttcctggaccagatagcaaagttctgggaactgcagggttgtaca
ttgaaaattcctcatgttgagcgcaaaactctggacttatatgtgctttacaagctggtc
aaagaagatggaggctttgatgtggtctgtaaagagcggaaatggacccagattgcactg
aagatgggctttgctcccggcaaagcagttggctctcaccttcgtgctcactatgagagg
attctctacccatatcattttttccagacaggagctaatcttatgaactcacagaagcca
actctgaccaatgacaccaaagacaaggagtacaaaccccatgacctgccccagcgtcag
tcggtgcaaccagtagaaacctgcactatcgcccgcagagctaaacggaccaagggccgc
tgttttaaatcagaactgggtgaggtctgtgaaaaacccaacctgaggaggagaatgggc
tcatatgtggcaaaaccagaaccagtaaagaatctttcagtggatgtgaaagaagaaccc
gttgagcaaaaagttgaaggtgaaaaatcgaaggtggagcagtatatttgcttggtatgt
gggggtggaggtgatgaagatagactattgctttgtgatggatgtgacgacagttatcac
accttctgtctgatcccacccctccatgacgtccccaaaggtgattggaggtgccccaag
tgcctggctcaggagtgtggtaagccacaggtggcatttgggttcgagcaggcctccaga
gactataccctccgcacctttggagatatggctgactctttcaagtctgactactttaac
atgcctgttcacatggttcccacagagctggtggagaaggagttctggaggctggttagc
accattgaggaggatgttactgtagagtatggggctgatattgcttcaaaggatttcgga
agcggcttccctgttaagaacggcacatttaaagtctcaccagaggaggagggttatcta
agcagtggctggaacctcaacaacatgccagtgttggatgcatctgtgctgactcatgtc
acagcggacatctgtgggatgaagctcccgtggctttatgtgggcatgtgcttctcctcc
ttctgctggcacattgaggatcattggagttattccgtcaactatctgcactggggagag
ccaaagacttggtatggcgctcctggctacgctgctgagcagttggagaatgtgatgaag
aacctggcccctgagctctttgagtctcagccagacttgctccaccagctggtcaccatc
atgaacccaaatgtgctcatggagcatggagtaccaatttaccgtacaaaccagtgtgct
ggtgagtttgtcattaccttcccgaggtcttatcacagtggtttcaaccagggcttcaac
tttgcagaggcagtcaatttctgcacagcagactggatgcctcttggtcgtctgtgtgtc
gagcactacagatctctcaacagatactgtgttttctcccacgatgagatgacttgtaat
attgccaccaaggcaaatgctctagagttagaactggcctctgctgtccagaaggacatg
tgtgccatgattctggaagagaagatgctccgtgagaaagcctataaactgggcgtgtgg
cactctcaacaggttgactatgatttgctgccagatgaggaaaggcagtgtgctaagtgc
cggaccacctgttacctgtctgccatcacctgtccctgtagccccgaccaactggtctgt
ctccaccacatcgaggacctctgctcttgcgctgctagaagctacacgctcaactataaa
tacacacttgctgaactgaagccattgttccaggctttgacggctcgtgctgagtcctat
gaagactgggcatctaaagttgacaagactttgaaggcagatcaagataataaaagtgat
ttggaggagtttcgttcattagtagtagaagcagagaagaagagttatccagagactgac
ctgctaagtcacctgcgtcaagtcattcagaatgcagataggtgtacatcaatggcacaa
catctccttaatggcaagagacagacaaggtatcgctccggtgggggaaagtctcagaac
cagctcacggtggaggaactgaggtcgtttgtcaaccagctgtatgacctgccctgttcc
atccgacagacccctttcttaaaggctcttttgaaccgtgtcgaacagttccagcaggag
agctcggatctccttgcagaggacatgcctggttcctctgctcttcagaggctcctagat
gagggcgcaagcctggatgtcgagttgcctcagctggcggtgttgaggcagaggctggag
caggcccgctgggtggaggccgttcaggaagccagcgatcagccggctgacctcagtcta
gattgcatgaggaggctcatagatcaaggagtgggcttggcaccacacgcctgtgtggaa
agaaccatggcccgcctgcaggagctgctcactgtatgcgaacactgggaagaaaaggcc
cataacatgctcactgcgaggcctcatcatagtattgagactcttgatgcagctatacag
gaagtggaccgcatcccagcatacctgcccagctgtcttcaacttaaagactgtgtaagc
agggccagggagtggataatggaagcagacgctcttcaggctggaggccgtgttcctggt
cttgctgccctgtctgagctagtgtcaagagccagaggtatttcggtaaagctggaacca
ctaactcgactggaaagcttaatatctgaggtacaggcctggaaggagagtgcagctaaa
acattccttttgaggaacgcatcccattctctccttgaggttttgtgtcctaggtgtgag
actggaccgcagaagtccaagtccaaaaaaagcaaggatgtctcagtaccctgcaagaaa
gttgaagtaaaactggactccctttttgatgtggaaaaggtgctttctatgagcacagac
accgcttcagcaatggccacactcagtgacgttcatcagaaagagctggagagcctgtct
atgttgaggacctcaaatgagtcgaagtttcagtcttcacccagctgtttggcccccaca
gtgtgcttgtgccacactgtcccagcaggccctatgctacagtgtgaactctgtcgagaa
gcctaccacagcggctgtgtgccagggtttaaggacatccagacaggactaccgtggtta
tgcccgctctgcaagcgctcagagaagccgcctctggataaggtgcttcccctgctcgct
tccttacagcggattagggttcgtcttccagagggtgatgctctgcgatatgtgattgag
agaacggtgcgctggcaacacaaagtgcaacaggttcctcctacaccgcatccgaatgga
aaagtgagacatatctctggaatcgcatcatctcagacacttgttgggagcaatggttct
ttctacatgctgcagccttgtattcctctcaatgaacttggtgctgagttggaggagctg
ttggtggaaggtcttctcctgcaggtgactttacctgagcttcagcagctttatagcagc
ctgctcagcaggttttcaccatcccagcactccctgcagagcagcgaacatgatcaccag
tatcacattgctcaagacagaggtccacctcacagaagccccccacacaacaaggaaccg
gatggagtgtcagaaaccaagaaggaacccgaaaagcttgagaagaacagcaaacggcgt
ctagagaaagagaatatagaagggcagcacagagacaagataaagaagcccaagaaaaag
aagcctaaaatgaagaaagaaaggagacgagaggagaaacaaaccacctccccctccaac
tccctttctgatctatcgtattcagatgactctgaggaggattggtctgtgtgctctgct
aagcagtgtcaacagccagaaggaaatgaggtaaactgggtccagtgtgatggcagctgt
aaccagtggttccaccagatttgtgtgggagtgtctgctgagcaggctgagaaagaggac
tacatatgcgtcagctgcgcaataaacaatctgacggcatga

DBGET integrated database retrieval system