KEGG   Carassius gibelio (silver crucian carp): 128022397
Entry
128022397         CDS       T08819                                 
Name
(RefSeq) THO complex subunit 7 homolog
  KO
K13176  THO complex subunit 7
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03013  Nucleocytoplasmic transport
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128022397
  09122 Translation
   03013 Nucleocytoplasmic transport
    128022397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    128022397
   03041 Spliceosome [BR:cgib03041]
    128022397
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     128022397
Spliceosome [BR:cgib03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    128022397
SSDB
Motif
Pfam: THOC7 CCDC39 UPF0242 OVT1 COG6_N DASH_Dad2 MTR4_beta-barrel V_ATPase_I Peptidase_S10 Sec8_N
Other DBs
NCBI-GeneID: 128022397
NCBI-ProteinID: XP_052465878
LinkDB
Position
A11:complement(13295766..13297759)
AA seq 202 aa
MGSITDDEVIRKRLLIDGDGAGDDRRINVLMKSFTKWCHSSFSPEEGFSQYQRMVTSLAQ
CEFSMGKTLLVYDMNLKEMENYEAIYADIEKSITSAHEKIAECKKEIQRAKRIRKNRQEY
DALARVIKQHPDRHETLKQLEALEKELQQLSHIKENVEDKLELRKKQFHVLLTTIQELQQ
TLENDEKMESDDTQDSPMENGD
NT seq 609 nt   +upstreamnt  +downstreamnt
atgggtagcatcactgatgatgaggtcatccggaagcgtcttctcatcgatggagatgga
gctggagatgacaggcgcattaatgtgcttatgaagagctttaccaaatggtgccattcc
agtttctcaccagaggaagggttctcacaatatcagaggatggtgacctctttggctcag
tgtgagttctccatggggaaaaccctgcttgtgtatgacatgaacctgaaagaaatggag
aattatgaagcaatctatgcagatattgagaaaagtataacatcagcccatgaaaaaatt
gcagagtgcaaaaaggaaatccagagggcaaaaaggatacgaaaaaaccgccaagagtat
gatgctttggccagagttatcaagcaacatccagacagacatgagaccttaaagcagctt
gaggctttagaaaaagagcttcagcagctttcacacatcaaggagaatgtggaggacaag
ttagaacttcgcaagaaacagttccacgtccttctcaccacgattcaggaacttcagcag
actttggagaatgatgagaagatggaaagtgatgatacccaggacagcccgatggaaaat
ggagactag

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