KEGG   Carassius gibelio (silver crucian carp): 128022527
Entry
128022527         CDS       T08819                                 
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03082  ATP-dependent chromatin remodeling
cgib03083  Polycomb repressive complex
cgib04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    128022527
   03083 Polycomb repressive complex
    128022527
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    128022527
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    128022527
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     128022527
  Histone modification proteins
   HAT complexes
    HATB complex
     128022527
   HDAC complexes
    Sin3A-HDAC complex
     128022527
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     128022527
    PRC2.2
     128022527
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     128022527
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    128022527
  Chromatin remodeling factors
   NuRD complex
    128022527
   NuRF complex
    128022527
   NuRF complex (fruit fly)
    128022527
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT140_1st Beta-prop_SPT8 NBCH_WD40 MIOS_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 128022527
NCBI-ProteinID: XP_052466148
LinkDB
Position
A11:complement(17336495..17343949)
AA seq 426 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
VVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPAKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTAKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LEGQAS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcagacaaagaagtatacgatgatgcagtggaggagagagttataaatgaggaatac
aagatctggaagaaaaacacaccattcctgtacgatctagtcatgacacatgcactcgag
tggcccagtctgacagtgcagtggcttcctgatgtcaacaggcctgagggaaaggattac
gtggtccatcggctagtgttgggcacacacacatcagatgagcagaaccacttggttatc
gccagtgttcagatccctaatgatgacgctcagttcgacgcgtcccactatgacagtgag
aaaggagcagagtttggagggtttggatcggtgagcggaaagatcgaaattgaaattaag
atcaaccatgaaggagaggtgaacagagccagatacatgccacaaaacccctgcatcatc
gccaccaagacccccacttcagacgtgctggtgtttgactacaccaaacacccagccaag
ccagaccccagtggcgaatgtagtccagacctgagactgcgggggcatcagaaggaggga
tacggtttgtcctggaaccccaacctgagtggaaacttgctcagtgcatcagacgaccat
acgatctgtctgtgggacatcagcgctgttccaaaggaggggaagatcgtagatgccaag
accatcttcacagggcacacagctgtggtggaggacgtgtcctggcaccttctacatgaa
tcgctgttcggatctgtggctgatgaccagaaactcatgatttgggacacacgatccaat
aacaccgcaaagcccagtcattctgtggacgcccacacggctgaagtcaactgcctgtcc
ttcaacccctacagcgagttcattctggccactggctcagcagacaagactgttgcattg
tgggatctgcgtaacctgaagctaaagcttcactcgtttgagtcacacaaggatgaaatc
tttcaggtccagtggtctcctcataacgagaccatcctggcctccagtggcacagacaga
cgcctcaatgtctgggatctgagtaaaatcggagaagagcagtctgcggaggacgcagag
gacgggccacctgagctgctgttcattcatggtgggcacacagctaaaatctcagatttc
tcctggaacccaaatgaaccttgggtaatctgttcggtgtcagaggacaacattatgcaa
gtatggcagatggctgagaacatctacaatgatgaagagccagacacccctgcgtcagag
ctggagggacaggcgtcttaa

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