Carassius gibelio (silver crucian carp): 128022556
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Entry
128022556 CDS
T08819
Name
(RefSeq) DAZ-associated protein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128022556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
128022556
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128022556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
128022556
NCBI-ProteinID:
XP_052466192
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All DBs
Position
A11:17833119..17848531
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AA seq
502 aa
AA seq
DB search
MDSISHHSALIAPPLLGRPVSHVSVAQIRFEPKAECDLPGRRRPAGDRASGPMSALPSTT
LATEMSNNIAGDEIGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKSTNQSRGFGF
VKFKDPNCVRSVLDTKPHNLDGRNIDPKPCTPRGMQPEKTRAKDGWKGSKSDSNKSKKIF
VGGIPHNCGEVELRDYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFH
DIMGKKVEVKKAEPRDSKAAAPGQLGASQWGPRAILSATNGWAAQPAPGWQQSYTPQGVW
VSTGQPLAGYGPPLPAGRGAPAQPPSPFNAFLVAAAPPTGGFGAPQGYPQQGFSTQPQFG
YSFGTPQGDQFVAQGMPPPPATPGAGTLGFAPATTPSQDLSKAPQAQPDFSYSQYGLGNY
PQDPSAYGPTRPSHSYVQEEQGYSAGYGQDLSAFGHSFADPSQQTASYAAAPSAPSSGPP
PAASSFGRGQNHNVQGFHPYRR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggactcaatttcccatcattccgcgcttattgcaccgcccttgctggggcgccccgtg
tctcacgtcagtgttgcgcagattcggtttgaaccgaaagcggagtgtgaccttcccggg
cggcggagaccggcaggagaccgagcaagcggacccatgtcagcactcccgtccacaacc
ctcgccacggagatgagcaacaacatagctggagacgaaatcgggaagctgtttgtgggt
ggattggattggagcaccacccaggagacgttgcgaagctacttttctcagtatggagag
gtcgtggattgtgtcatcatgaaagataaaagcacaaatcagtccaggggcttcggcttt
gtgaagtttaaagatcccaactgcgtacggagcgtcctggacaccaaacctcataacctg
gacggaagaaatatcgacccaaagccttgtacgccaagagggatgcagcctgagaagact
cgggcaaaagacggctggaaaggaagcaaaagtgacagcaataaatctaagaagatattt
gtgggtggaattcctcataattgcggcgaggttgaactcagggattacttcaaccgattt
ggagtggtcacagaggtggtaatgatctatgacgcagagaaacagaggcctcgaggtttt
ggatttattactttcgaggccgaacaatcagtggaccaggctgtcaacatgcattttcac
gacatcatgggcaaaaaagttgaagtgaagaaggcggagccacgggacagcaaagctgcc
gcccctggtcagctgggagccagtcagtgggggccccgagccattttaagtgcaaccaat
ggctgggcagcacaaccggctccgggctggcagcagagctacacgcctcagggtgtttgg
gtgtctacaggtcaaccacttgctgggtatggacctcctttacctgctggccgtggggca
cccgcacaacctccttctccatttaatgcatttctagttgcagcagcaccgcctacaggg
ggatttggggcacctcagggatacccccaacagggttttagcacacaacctcagtttgga
tatagctttggtacacctcaaggtgaccagtttgtagcacagggaatgcctccccctcct
gccacgccgggtgcagggactttaggttttgccccggcgacgactccctctcaggacctg
agcaaagccccccaagcacagccagacttctcctacagccagtatggcttgggtaactat
cctcaggacccctctgcctacggaccaacgcgtccttctcacagttatgtacaggaagag
cagggatatagcgcaggttatgggcaggacctgagtgcttttggtcatagctttgcagac
cccagccagcaaactgcctcatacgccgcagccccctccgcaccctcatcaggaccccct
ccggccgcaagcagcttcggacgaggacagaaccacaatgtacagggcttccacccctac
cggcgctga
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