KEGG   Carassius gibelio (silver crucian carp): 128022672
Entry
128022672         CDS       T08819                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128022672
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    128022672
   03041 Spliceosome [BR:cgib03041]
    128022672
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     128022672
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     128022672
Spliceosome [BR:cgib03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    128022672
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 DNA_ligase_IV NID
Other DBs
NCBI-GeneID: 128022672
NCBI-ProteinID: XP_052466415
LinkDB
Position
A11:21479417..21490761
AA seq 365 aa
MSKEQQTPREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGF
VTYSSVNEVDAAMDARPHKVDGRAVEPKRAVSREDSSRPGAHSTVKKMFVGGIKEDTDEE
HLREYFSQFGKIEEVNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQKYHTVNGHNCEVRK
ALSREEMNRVSVNQRGGRGGGGGGGGGGSGGGGNFGRGGGGGYGGGYGGGRGGYGGGDGY
NGYGGNGGYGGGGPNYGGNRGYGGGGGGGGGGGYGNQGGGYGGGGGYDNYNSGGGGNFGG
GNFGGGGGYNDFGSYNNQSSSNYGPMKGGNYGGGGRSGGGGGPYGGGYGGGSGGGYGGGS
GGRRF
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgtccaaagagcaacagaccccccgtgagcctgagcagctccgaaaactgttcatcggg
ggcctcagtttcgagacaacagatgagagtctaagagcccacttcgagcaatgggggact
cttacagactgtgtggtgatgagggaccccaacaccaagaggtcgaggggttttgggttt
gtgacctatagttcggtgaatgaggtggatgcagcgatggacgctcgtccacacaaagtg
gacggaagagctgttgaacccaagagggcggtgtctagagaagactcgtccagaccaggc
gctcactccactgttaaaaagatgtttgtgggtggaatcaaagaagatacggatgaggaa
catctgcgcgagtatttcagccagtttggtaaaatagaggaggtgaacatcatgactgag
aagaacagtgataagaggaggggcttcgccttcataacatttgatgaccatgatgctgtt
gacaggattgtcatacagaaataccacacagtgaatggacacaactgtgaagtcaggaaa
gctctctccagagaggaaatgaacagggtgtcggttaatcaacgaggtggtagaggagga
ggaggtggtggaggaggaggtggtagcggtggcggtggaaactttggcagaggtggaggt
ggaggctatggaggtggatatggaggaggaagaggtggttacggtggaggtgatggatat
aatggctacggagggaatggtggctatggtggaggtggacctaattacggaggcaaccgc
ggttatggaggaggcggaggtggtggtggtggtggtggctatggaaaccagggtggaggc
tacggtggcggcggtggctatgataactacaacagtggaggtggaggcaacttcggagga
ggcaactttggaggtggcgggggctacaacgacttcggcagctacaacaatcaatcttcc
tctaactacggcccgatgaagggaggaaactacggaggtggtggaaggagcggtggtggt
ggaggcccatacggcggtggttatggaggaggctctggtggtggttatggaggaggctct
ggtgggcgaaggttttag

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