Carassius gibelio (silver crucian carp): 128022687
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Entry
128022687 CDS
T08819
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03320
PPAR signaling pathway
cgib04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128022687
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128022687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128022687
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgib03310
]
128022687
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128022687
Nuclear receptors [BR:
cgib03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
128022687
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
PPARgamma_N
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128022687
NCBI-ProteinID:
XP_052466435
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Position
A11:complement(22389057..22415128)
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AA seq
526 aa
AA seq
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MLHSRFTFTKPSFTSDMVDTQTFAWPVGFGLSALELDELDDSSHSMGMKPFSTLDYTTIS
GIEYEPSPPQNEMPHMMDLTQMYNYRAQENYRMQESIYRAQESSYTAEESSYRAHQHQNS
IKLEPESPPQFVENSLSFSKPHEDQSTSVLNIECRVCGDKASGFHYGVHACEGCKGFFRR
TIRLKLVYDHCDLHCRIHKKSRNKCQYCRFQKCLMVGMSHNAIRFGRMPQAEKEKLLAEF
STDVDHMHPESADLRALARQLYESYLKYFPLTKAKARAILSGKTSDNTPFVIHDMKSLLE
GEQMINCRQMPMQEHRRADMGVMHEVELRFFHSCQSRSAEAVSEVTEFAKSIPGFVNLDL
NDQVTLLKYGVIEVLIIMMSPLMNKDGTLISYGQIFMTREFLKSLRKPFCEMMEPKFEFS
VKFNMLELDDSDMALFLAVIILSGDRPGLLNVKPIEDLQETVLHSLELQLKMNHPDSLQL
FAKVLQKMTDLRQLVTDHVQLIQLLKETEVDWCLHPLLQEIMRDLY
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacagccgcttcactttcacaaagccatcatttacatcggacatggtggacacg
cagacgtttgcctggccggtgggattcggcctgagcgctctggagctggacgaactcgat
gacagctcgcactccatgggcatgaaacctttctccacgctggactacaccaccatctcc
ggcatcgagtatgagccgagtccgccgcagaacgagatgccgcacatgatggatctgacg
cagatgtacaactacagagcgcaggagaactacaggatgcaggagagcatctacagagct
caagagagcagctacactgctgaagagagcagctacagagcacaccaacaccaaaattca
atcaaacttgaacccgagtctcctccacagttcgtggagaacagcctgtccttttccaaa
cctcatgaagatcagtccacctccgtgttaaacattgagtgtcgtgtgtgtggagacaag
gcctctggcttccattacggtgttcacgcctgcgagggctgcaagggattcttccgcagg
accattcgcctgaagctggtctatgaccactgcgacctgcactgccgcatccacaagaag
agtcgcaacaagtgccagtactgccgctttcagaagtgcctgatggtgggcatgtcacac
aacgccattcgttttggtcgaatgccccaagccgagaaagagaagctcttggcggagttc
tccactgacgtggatcacatgcatcccgaatcggctgatctccgagccctggccaggcaa
ctctacgagtcctatctgaagtacttccccctgaccaaagccaaggccagggccatcctc
tcagggaagaccagcgacaacacacctttcgtcattcacgacatgaagtctctgttggag
ggcgagcagatgatcaactgccggcagatgcccatgcaggagcacaggagggccgacatg
ggcgtgatgcacgaggtggagctgcgcttcttccacagctgccagtcgcgctcggccgaa
gccgtcagcgaagtcaccgaattcgccaagagcatccccggcttcgtgaacctggacttg
aacgaccaggtgacgctcctgaagtacggcgtcatcgaagtcctcatcatcatgatgtct
ccgctcatgaacaaggacggcaccctcatctcctacggtcagatcttcatgacccgcgag
ttcctcaagagtctgcgcaaacccttctgtgaaatgatggagcccaagtttgagttctcc
gtcaagttcaacatgctggagctggacgacagcgacatggcgctgttcctggccgtcatc
atcctgagcggagatcgcccgggtctgctgaacgtcaagcccatcgaggatctccaggag
acggttcttcattctctggagctgcagctgaagatgaaccaccccgactctctccagctg
ttcgccaaagtgctgcagaagatgacggacctgcgtcagctggtgaccgaccacgtccag
ctgatccagctgctgaaggagaccgaggtggactggtgcttgcacccgctcctgcaggag
atcatgagggacttgtactag
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