Carassius gibelio (silver crucian carp): 128024935
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Entry
128024935 CDS
T08819
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00310
Lysine degradation
cgib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
128024935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128024935
03036 Chromosome and associated proteins [BR:
cgib03036
]
128024935
Enzymes [BR:
cgib01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
128024935
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128024935
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
128024935
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128024935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
HVO_2753_ZBP
zf-C2H2_3rep
zf-met
Motif
Other DBs
NCBI-GeneID:
128024935
NCBI-ProteinID:
XP_052466781
LinkDB
All DBs
Position
A12:5050698..5055805
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AA seq
845 aa
AA seq
DB search
MSDSPDFPPSVEQNLEIEGSVVMMEGQEDSMFNDQHFYCEMCHHHFIDQCKVHGPPLFTC
DSPAAMGVPQRALLTLPQGLVIGRSGISNAGLGVFNQGKTVPLGMHFGPFDGEVTSQEKA
MDSAFSWVVYRGNNQYTYIDAERDTHSNWMKFVVCSRSETEQNLVAFQQNGRILFRCCRP
IGPGQEFRVWYAEEYAQGLGIIWDKIWDKKCISLGTTEEQASQDCLCPYCHYSFPAIFYL
HAHVKRSHPDEYAHFMQTQPLESVDIDQCLPPSDEAPSTHTEPVIESCQDQISTLNGQPI
HHSEKSDCADLSDTCSNGVSGQTGLDEMNKCGECGRNFLRSCHLKRHQRTIHSKEKPYCC
SHCRKCFSQATGLKRHQQIHQGEEKRQKDADRPSDIYPCTKCSFSFVAKVNLYQHLKRHH
HGEYLRLVESGSIAVGTGGDAEKNTDEHDPTYEPPARGRRPVKNTLRGRSHTKKVPLGRP
RGRPPKPKNAAVDEVQKTLSICTECEQAFSDLETLETHQCGVQDHNKPKEPHEAPASQHV
CGECLRAFNNLDLLEAHECIQQGDGSYCCSHCNLYFNRMCNLRRHERTIHSKEKPYCCTL
CLKSFTQSSGLKRHQQSHSRCKAHRQSSALVDATIFPCTYCPFSFTDERYLYKHIRRHHP
EMSVKYLSFQEGGVLSVEKPHSCSQCCKSFSTIKGFKNHSCFKQGERVYLCPDCGKAFIW
FNSLKQHQRIHTGEKPYTCQQCGKSFVHAGQLNVHLRTHTGEKPFLCSQCGESFRQSGDL
RRHEQKHSGIRPCTCPDCGKSFSRPQSLKAHQQIHNGTKLFPCTQCGKSFTRRYHLTRHH
QKMHS
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtcccgattttccaccaagcgttgagcagaatttagagatagaaggctct
gttgtgatgatggagggacaggaggatagcatgtttaatgaccaacatttctattgtgag
atgtgtcaccatcacttcattgaccagtgtaaggttcatggtccaccattattcacatgt
gactcgccagcagctatgggcgttcctcagagagctctgctgacgctgccacaaggcttg
gttatcggtcgatcgggcatctctaatgcaggacttggagttttcaaccaaggcaagact
gtgcctttggggatgcattttggaccttttgatggagaggtgacctctcaggaaaaggca
atggatagtgccttctcttgggtagtttacagaggcaataatcagtatacctacatagat
gcagaaagagacactcactctaactggatgaagtttgtggtgtgctcaaggagtgagacg
gagcagaatcttgttgcattccagcaaaatggacgtattctgttccgttgttgtcgccct
attggcccagggcaggaatttagagtttggtatgcagaggaatatgctcaaggacttggc
atcatctgggataagatctgggataaaaaatgcatttctctaggaacaactgaagaacag
gcaagtcaggactgtctgtgtccttattgccattactccttcccagccattttttatctg
catgctcatgtgaagcgctctcatcccgatgagtatgcacacttcatgcagacacagccg
cttgagtctgtggacatcgaccagtgccttccgccatctgatgaggctccttcaacccat
acggagccagtaatagaaagctgtcaggatcaaatttcaaccctaaatggacaacccatc
catcactcagaaaagtcagattgcgctgatttgtctgacacgtgcagtaatggtgtgagt
ggtcagacaggtctcgatgaaatgaataaatgtggtgaatgtggccgtaactttttgaga
tcttgtcatctgaagagacatcagcgtactattcactccaaagagaagccttattgctgc
agccattgtaggaagtgctttagtcaggcaacagggctgaaaagacaccaacaaatccac
cagggggaggaaaagagacagaaagatgctgacagaccttctgatatatacccttgcaca
aagtgctccttctcttttgtggccaaagtcaatttgtatcagcatctgaaacggcatcac
catggagagtatcttcgtttagttgagagtggctcaatagcagtagggactggaggtgat
gctgagaaaaatactgacgagcatgacccaacctatgaacctcctgctcgagggagaagg
cctgtgaagaacactttaagaggcaggagtcacactaaaaaagtacctcttggccgaccg
agggggcgaccacctaaacccaagaatgcagctgtggatgaagtgcagaagactttatct
atctgcaccgagtgtgaacaagcgttctctgatttggagacactggaaactcaccaatgt
ggagtacaagatcataataagccaaaggaaccacatgaagcaccagcttctcagcatgtc
tgtggtgagtgcctgcgagctttcaataatttagatcttcttgaagcccatgagtgcatt
cagcagggagacggatcttactgttgctctcactgcaacctttacttcaaccgtatgtgt
aaccttcgtcgccatgagcgcaccatccactccaaggagaagccctactgctgcacgctg
tgcctcaagtccttcacccagtcttctggcttgaagcgccaccagcagagccactcacgc
tgcaaggcccaccgccagagctcagcccttgttgatgccaccatctttccctgtacatac
tgccccttctctttcacagatgaacgctatctttacaaacacatccgccgtcaccatcca
gaaatgagcgtcaagtatctgagtttccaagaagggggtgttttgtctgttgaaaagcct
cacagctgcagccaatgctgcaagagctttagcacaatcaagggcttcaagaaccacagc
tgcttcaagcagggagagagggtgtatctgtgcccagattgcggaaaggcattcatttgg
tttaatagcctcaagcaacaccagcgcatccacaccggagaaaagccttacacgtgtcag
cagtgtggcaaaagttttgtccacgccggacaactgaatgtgcacctccgcacacacacg
ggtgaaaaacctttcctgtgttcacagtgtggcgaaagcttcaggcagtcgggagatttg
aggaggcatgagcagaagcattcaggtattcgcccctgcacgtgtcccgattgtgggaaa
agctttagtcggccacaaagtctcaaagctcaccaacagatccataatggcaccaaactc
ttcccctgcactcagtgtggaaaaagctttactcgtagataccatctcacccggcatcat
cagaaaatgcactcctga
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